Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016321 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.0e-42 176.4 94 100.0
CSS0031687 Camellia sinensis var. sinensis HOM05D007627 ORTHO05D009640 1.9e-41 172.2 94 97.9
Actinidia21001 Actinidia chinensis HOM05D007627 ORTHO05D009640 1.2e-30 136.3 95 82.1
Actinidia25845 Actinidia chinensis HOM05D007627 ORTHO05D009640 2.5e-28 128.6 94 78.7
Rhsim01G0290400 Rhododendron simsii HOM05D007627 ORTHO05D009640 1.3e-26 122.9 95 73.7
Dinv33113 Davidia involucrata HOM05D000361 ORTHO05D005006 8.7e-26 120.2 93 72.0
Nitab4.5_0001592g0100 Nicotiana tabacum HOM05D007627 ORTHO05D009640 3.1e-23 111.7 92 63.0
Dinv10091 Davidia involucrata HOM05D007627 ORTHO05D009640 1.5e-22 109.4 76 77.6
Nitab4.5_0012228g0040 Nicotiana tabacum HOM05D007627 ORTHO05D009640 4.5e-22 107.8 91 62.6
Solyc01g097360.4 Solanum lycopersicum HOM05D007627 ORTHO05D009640 1.0e-21 106.7 90 63.3
CAN.G134.101 Capsicum annuum HOM05D007627 ORTHO05D009640 1.7e-21 105.9 91 60.4
Hma1.2p1_0212F.1_g089970 Hydrangea macrophylla HOM05D007627 ORTHO05D009640 3.8e-21 104.8 82 68.3
Sopen01g041030 Solanum pennellii HOM05D007627 ORTHO05D009640 3.8e-21 104.8 90 62.2
TAR381G1624 Trochodendron aralioides HOM05D007627 ORTHO05D009640 4.9e-21 104.4 93 64.5
Haze_05035 Corylus avellana HOM05D007627 ORTHO05D009640 1.1e-20 103.2 81 69.1
CiPaw.07G117000 Carya illinoinensis HOM05D007627 ORTHO05D009640 1.4e-20 102.8 81 66.7
RcHm_v2.0_Chr7g0241611 Rosa chinensis HOM05D007627 ORTHO05D009640 4.2e-20 101.3 92 62.0
Peaxi162Scf00282g00336 Petunia axillaris HOM05D007627 ORTHO05D009640 9.3e-20 100.1 91 59.3
MD03G1295800 Malus domestica HOM05D007627 ORTHO05D009640 1.6e-19 99.4 92 59.8
Glyma.18G296500 Glycine max HOM05D007627 ORTHO05D009640 2.1e-19 99.0 91 63.7
Cfa005805 Carpinus fangiana HOM05D007627 ORTHO05D009640 3.5e-19 98.2 81 66.7
Manes.05G003000 Manihot esculenta HOM05D007627 ORTHO05D009640 3.5e-19 98.2 93 61.3
Atru.chr5.1007 Acer truncatum HOM05D007627 ORTHO05D009640 4.6e-19 97.8 94 64.9
Sc17g0000480 Simmondsia chinensis HOM05D007627 ORTHO05D009640 7.9e-19 97.1 93 60.2
arahy.Tifrunner.gnm1.ann1.2EH2S8 Arachis hypogaea HOM05D006497 ORTHO05D009640 1.0e-18 96.7 80 67.5
FAN16G0578 Fragaria x ananassa HOM05D007627 ORTHO05D009640 1.3e-18 96.3 94 62.8
Thecc.01G312700 Theobroma cacao HOM05D007627 ORTHO05D009640 1.3e-18 96.3 83 65.1
FAN21G2770 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.3e-18 95.5 85 65.9
FAN25G0556 Fragaria x ananassa HOM05D007627 ORTHO05D009640 2.3e-18 95.5 85 65.9
Migut.B01085 Erythranthe guttata HOM05D007627 ORTHO05D009640 3.0e-18 95.1 92 57.6
Phvul.008G006000 Phaseolus vulgaris HOM05D007627 ORTHO05D009640 3.0e-18 95.1 93 59.1
Cc02_g30590 Coffea canephora HOM05D007627 ORTHO05D009640 3.9e-18 94.7 82 62.2
Prupe.8G271600 Prunus persica HOM05D007627 ORTHO05D009640 3.9e-18 94.7 92 57.6
VMungo1383G2294 Vigna mungo HOM05D007627 ORTHO05D009640 3.9e-18 94.7 92 60.9
FvH4_3g25590 Fragaria vesca HOM05D007627 ORTHO05D009640 5.1e-18 94.4 85 64.7
FAN11G3818 Fragaria x ananassa HOM05D007627 ORTHO05D009640 5.1e-18 94.4 85 64.7
QL02p088799 Quercus lobata HOM05D007627 ORTHO05D009640 8.7e-18 93.6 93 58.1
Cfa005807 Carpinus fangiana HOM05D007627 ORTHO05D009640 1.5e-17 92.8 81 61.7
ECA248G3246 Erigeron canadensis HOM05D007627 ORTHO05D009640 1.5e-17 92.8 93 62.4
Sed0009470 Sechium edule HOM05D007627 ORTHO05D009640 1.5e-17 92.8 86 64.0
HanXRQChr01g0000791 Helianthus annuus HOM05D007627 ORTHO05D009640 3.3e-17 91.7 85 62.4
Lalb_Chr04g0257421 Lupinus albus HOM05D007627 ORTHO05D009640 3.3e-17 91.7 93 55.9
Medtr7g007290 Medicago truncatula HOM05D007627 ORTHO05D009640 4.3e-17 91.3 93 55.9
SalBow8G4146 Salvia bowleyana HOM05D007627 ORTHO05D009640 5.7e-17 90.9 94 57.4
Ca_04047_v3 Cicer arietinum L. HOM05D007627 ORTHO05D009640 7.4e-17 90.5 93 54.8
Gohir.D11G114900 Gossypium hirsutum HOM05D007627 ORTHO05D009640 9.7e-17 90.1 82 64.6
Gorai.007G123100 Gossypium raimondii HOM05D007627 ORTHO05D009640 9.7e-17 90.1 82 64.6
Lalb_Chr10g0091241 Lupinus albus HOM05D007627 ORTHO05D009640 9.7e-17 90.1 93 58.1
CsaV3_1G045260 Cucumis sativus L. HOM05D007627 ORTHO05D009640 1.6e-16 89.4 82 62.2
CANSAT78G1399 Cannabis sativa HOM05D007627 ORTHO05D009640 2.2e-16 89.0 93 58.1
Gohir.A11G109700 Gossypium hirsutum HOM05D007627 ORTHO05D009640 2.2e-16 89.0 82 65.9
Oeu038438.1 Olea europaea HOM05D007627 ORTHO05D009640 2.2e-16 89.0 90 55.6
DCAR_005763 Daucus carota HOM05D000361 ORTHO05D005006 4.8e-16 87.8 80 62.5
MELO3C010153.2 Cucumis melo HOM05D007627 ORTHO05D009640 6.3e-16 87.4 82 61.0
Duzib192G0243 Durio zibethinus HOM05D007627 ORTHO05D009640 6.3e-16 87.4 83 62.7
MSTRG.21216 Avicennia marina HOM05D007627 ORTHO05D009640 8.2e-16 87.0 93 57.0
Cpa.g.sc18.36 Carica papaya HOM05D007627 ORTHO05D009640 8.2e-16 87.0 79 60.8
Ciclev10023058m.g Citrus clementina HOM05D007627 ORTHO05D009640 1.8e-15 85.9 94 54.3
COL.COLO4_23238 Corchorus olitorius HOM05D007627 ORTHO05D009640 1.8e-15 85.9 82 61.0
Lj1g0016177 Lotus japonicus HOM05D007627 ORTHO05D009640 1.8e-15 85.9 93 54.8
Potri.014G121300 Populus trichocarpa HOM05D007627 ORTHO05D009640 1.8e-15 85.9 93 57.0
QL12p020023 Quercus lobata HOM05D007627 ORTHO05D009640 1.8e-15 85.9 94 55.3
ClCG10G011370 Citrullus lanatus HOM05D007627 ORTHO05D009640 4.1e-15 84.7 93 57.0
HanXRQChr11g0329361 Helianthus annuus HOM05D007627 ORTHO05D009640 4.1e-15 84.7 83 59.0
PGR119G1365 Punica granatum HOM05D007627 ORTHO05D009640 4.1e-15 84.7 91 54.9
unitig_578.g15942 Utricularia gibba HOM05D007627 ORTHO05D009640 6.9e-15 84.0 81 51.9
TPR.G35989 Trifolium pratense HOM05D007627 ORTHO05D009640 9.0e-15 83.6 93 52.7
Sabra14G0090000 Salix brachista HOM05D007627 ORTHO05D009640 1.5e-14 82.8 77 61.0
AUR62037635 Chenopodium quinoa HOM05D007627 ORTHO05D009640 2.0e-14 82.4 76 64.5
Eucgr.H01048 Eucalyptus grandis HOM05D007627 ORTHO05D009640 7.7e-14 80.5 96 52.1
AUR62044233 Chenopodium quinoa HOM05D007627 ORTHO05D009640 1.3e-13 79.7 78 65.4
Ah.10g033580 Amaranthus hybridus HOM05D004014 ORTHO05D005890 1.7e-13 79.3 79 59.5
Psat3g205400 Pisum sativum HOM05D007627 ORTHO05D009640 2.9e-13 78.6 93 50.5
EL10Ac2g03554 Beta vulgaris HOM05D007627 ORTHO05D009640 5.0e-13 77.8 79 60.8
Thhalv10011898m.g Eutrema salsugineum HOM05D007627 ORTHO05D009640 1.1e-12 76.6 93 49.5
Aa31LG2G19210 Aethionema arabicum HOM05D007627 ORTHO05D009640 2.5e-12 75.5 70 60.0
Os06g0717300 Oryza sativa ssp. japonica HOM05D007627 ORTHO05D009640 1.6e-11 72.8 81 51.9
Medtr7g007300 Medicago truncatula HOM05D000007 ORTHO05D000017 2.7e-11 72.0 59 62.7
CARHR037420 Cardamine hirsuta HOM05D007627 ORTHO05D009640 6.1e-11 70.9 85 51.8
HPP92_022749 Vanilla planifolia HOM05D007627 ORTHO05D009640 1.0e-10 70.1 93 45.2
BcaC08g42976 Brassica carinata HOM05D007627 ORTHO05D009640 1.4e-10 69.7 79 53.2
Zm00001eb228130 Zea mays HOM05D007627 ORTHO05D009640 1.4e-10 69.7 80 45.0
Aqoxy1G00002 Aquilegia oxysepala HOM05D007627 ORTHO05D009640 1.8e-10 69.3 74 55.4
Lsat_1_v5_gn_5_191420 Lactuca sativa HOM05D007627 ORTHO05D009640 3.9e-10 68.2 80 57.5
Sp1g34810 Schrenkiella parvula HOM05D007627 ORTHO05D009640 3.9e-10 68.2 79 51.9
ATR0807G116 Amborella trichopoda HOM05D007627 ORTHO05D009640 6.7e-10 67.4 94 45.7
BcaB07g33814 Brassica carinata HOM05D007627 ORTHO05D009640 6.7e-10 67.4 79 51.9
AT1G47820 Arabidopsis thaliana HOM05D007627 ORTHO05D009640 8.8e-10 67.0 55 65.5
CDE04G1409 Ceratophyllum demersum HOM05D000443 ORTHO05D001066 1.1e-09 66.6 89 49.4
THA.LOC104824213 Tarenaya hassleriana HOM05D007627 ORTHO05D009640 9.7e-09 63.5 49 69.4
AL1G54240 Arabidopsis lyrata HOM05D007627 ORTHO05D009640 3.7e-08 61.6 80 48.8
SHI28956 Sapria himalayana HOM05D000002 ORTHO05D000001 4.8e-08 61.2 61 50.8
PSO700G0179 Papaver somniferum HOM05D007627 ORTHO05D009640 6.3e-08 60.8 82 48.8
Carub.0001s3677 Capsella rubella HOM05D007627 ORTHO05D009640 4.1e-07 58.2 81 46.9
Carub.0001s3680 Capsella rubella HOM05D007627 ORTHO05D009640 2.0e-06 55.8 67 56.7
Carub.0001s3693 Capsella rubella HOM05D007627 ORTHO05D009640 3.4e-06 55.1 65 55.4


User provided reference genes

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