Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016316 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 3.6e-67 258.1 127 100.0
CSS0043593 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 2.1e-62 242.3 138 88.4
CSS0027970 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 7.3e-44 180.6 126 73.8
CSS0023272 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 8.4e-40 167.2 153 61.4
Hma1.2p1_0619F.1_g190370 Hydrangea macrophylla HOM05D000023 ORTHO05D002258 1.8e-34 149.4 110 70.9
Dinv14651 Davidia involucrata HOM05D019978 ORTHO05D018230 2.0e-33 146.0 115 66.1
TWI23G0203 Tripterygium wilfordii HOM05D000023 ORTHO05D000014 1.9e-31 139.4 126 54.0
Actinidia06841 Actinidia chinensis HOM05D000023 ORTHO05D000014 5.5e-31 137.9 104 68.3
Lsat_1_v5_gn_5_118361 Lactuca sativa HOM05D000023 ORTHO05D000014 1.8e-29 132.9 126 51.6
Hma1.2p1_0153F.1_g067820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 8.7e-29 130.6 127 51.2
Hma1.2p1_0017F.1_g011150 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.5e-28 129.8 126 52.4
Hma1.2p1_1125F.1_g259630 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-28 129.4 127 49.6
Hma1.2p1_0222F.1_g093680 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.5e-28 129.0 127 51.2
Hma1.2p1_0661F.1_g197850 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.4e-26 123.2 111 53.2
Hma1.2p1_1425F.1_g282820 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.4e-26 123.2 126 50.0
Hma1.2p1_0169F.1_g074660 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.6e-25 119.0 115 51.3
HanXRQChr05g0139411 Helianthus annuus HOM05D000023 ORTHO05D000014 5.8e-25 117.9 126 47.6
ECA238G0901 Erigeron canadensis HOM05D000023 ORTHO05D000014 2.5e-23 112.5 126 45.2
Hund22389 Selenicereus undatus HOM05D000023 ORTHO05D000014 6.0e-22 107.8 127 46.5
EL10Ac2g03711 Beta vulgaris HOM05D000023 ORTHO05D000014 7.9e-22 107.5 126 42.1
AUR62042194 Chenopodium quinoa HOM05D000023 ORTHO05D000014 7.9e-22 107.5 125 44.0
RcHm_v2.0_Chr7g0223471 Rosa chinensis HOM05D000023 ORTHO05D002258 3.0e-21 105.5 110 45.5
AUR62012060 Chenopodium quinoa HOM05D000023 ORTHO05D000014 8.7e-21 104.0 125 43.2
Ah.10g026540 Amaranthus hybridus HOM05D057872 ORTHO05D000014 1.8e-18 96.3 108 39.8
AUR62040094 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.0e-17 92.8 125 41.6
Rhsim02G0002400 Rhododendron simsii HOM05D000023 ORTHO05D000014 3.8e-16 88.6 125 40.8
Ah.07g197140 Amaranthus hybridus HOM05D000023 ORTHO05D000014 6.5e-16 87.8 92 46.7
Rhsim05G0125600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.4e-15 86.7 125 39.2
Hma1.2p1_0084F.1_g042930 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 1.9e-15 86.3 92 46.7
Hma1.2p1_2537F.1_g324110 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 3.6e-14 82.0 67 53.7
vmacro01190 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.6e-14 82.0 125 37.6
vmacro22609 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 3.6e-14 82.0 125 37.6
Ah.02g119120 Amaranthus hybridus HOM05D000023 ORTHO05D002258 4.6e-14 81.6 122 36.1
CSS0029210 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 4.6e-14 81.6 125 37.6
COL.COLO4_27211 Corchorus olitorius HOM05D000023 ORTHO05D000014 6.1e-14 81.3 73 54.8
Hma1.2p1_0801F.1_g220220 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.3e-13 79.3 113 38.9
vmacro21165 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 1.1e-12 77.0 125 36.8
Hma1.2p1_1264F.1_g271330 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.5e-12 75.9 125 35.2
RhsimUnG0210600 Rhododendron simsii HOM05D000023 ORTHO05D000014 5.7e-12 74.7 125 36.8
vmacro21303 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 5.7e-12 74.7 125 36.8
CSS0003700 Camellia sinensis var. sinensis HOM05D000023 ORTHO05D000014 1.7e-11 73.2 111 36.9
RcHm_v2.0_Chr5g0011621 Rosa chinensis HOM05D013926 ORTHO05D020985 1.7e-11 73.2 114 37.7
Rhsim12G0068400 Rhododendron simsii HOM05D000023 ORTHO05D000014 2.8e-11 72.4 125 36.0
vmacro00523 Vaccinium macrocarpon HOM05D000023 ORTHO05D000014 8.2e-11 70.9 108 38.0
Hma1.2p1_0139F.1_g063210 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 5.3e-10 68.2 71 50.7
EL10Ac1g01552 Beta vulgaris HOM05D000023 ORTHO05D000014 1.2e-09 67.0 115 34.8
PSO421G0727 Papaver somniferum HOM05D000023 ORTHO05D000014 1.2e-09 67.0 124 34.7
HPP92_024951 Vanilla planifolia HOM05D000023 ORTHO05D000014 1.2e-09 67.0 111 36.0
RhsimUnG0179600 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.5e-09 66.6 110 36.4
Hma1.2p1_0400F.1_g144380 Hydrangea macrophylla HOM05D000023 ORTHO05D000014 2.0e-09 66.2 113 33.6
AUR62042294 Chenopodium quinoa HOM05D000023 ORTHO05D000014 2.6e-09 65.9 73 42.5
HPP92_026521 Vanilla planifolia HOM05D000023 ORTHO05D000014 7.7e-09 64.3 111 35.1
Rhsim12G0068300 Rhododendron simsii HOM05D000023 ORTHO05D000014 1.0e-08 63.9 118 33.9
Actinidia02644 Actinidia chinensis HOM05D000023 ORTHO05D000014 2.2e-08 62.8 46 69.6
ECA240G1446 Erigeron canadensis HOM05D001392 ORTHO05D003370 3.8e-08 62.0 67 46.3
Lsat_1_v5_gn_2_11620 Lactuca sativa HOM05D000023 ORTHO05D000014 3.2e-07 58.9 62 43.5
Rhsim01G0022100 Rhododendron simsii HOM05D000023 ORTHO05D000014 9.4e-07 57.4 93 34.4
COL.COLO4_06621 Corchorus olitorius HOM05D023965 ORTHO05D000014 1.2e-06 57.0 114 37.7


User provided reference genes

Program Settings