Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016282 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 8.5e-106 387.1 209 100.0
CSS0048346 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 8.5e-106 387.1 209 100.0
Dinv30507 Davidia involucrata HOM05D003500 ORTHO05D003919 3.0e-50 202.6 196 59.2
Rhsim08G0221500 Rhododendron simsii HOM05D003500 ORTHO05D003919 3.1e-47 192.6 202 57.4
vmacro18911 Vaccinium macrocarpon HOM05D003500 ORTHO05D003919 7.8e-43 177.9 199 54.8
Haze_16428 Corylus avellana HOM05D003500 ORTHO05D003919 2.9e-29 132.9 173 52.0
QL05p023510 Quercus lobata HOM05D003500 ORTHO05D003919 6.4e-29 131.7 169 49.7
Cfa002069 Carpinus fangiana HOM05D003500 ORTHO05D003919 4.2e-28 129.0 167 52.1
CiPaw.01G239100 Carya illinoinensis HOM05D003500 ORTHO05D003919 2.3e-26 123.2 172 48.8
Nitab4.5_0005851g0060 Nicotiana tabacum HOM05D003500 ORTHO05D003919 1.3e-24 117.5 168 41.7
Thecc.06G088400 Theobroma cacao HOM05D003500 ORTHO05D003919 2.1e-24 116.7 146 47.3
Nitab4.5_0000671g0100 Nicotiana tabacum HOM05D003500 ORTHO05D003919 6.2e-24 115.2 168 41.7
Peaxi162Scf00015g10038 Petunia axillaris HOM05D003500 ORTHO05D003919 5.3e-23 112.1 132 46.2
Duzib235G1266 Durio zibethinus HOM05D003500 ORTHO05D003919 6.9e-23 111.7 136 49.3
TAR636G0685 Trochodendron aralioides HOM05D003500 ORTHO05D003919 9.0e-23 111.3 172 45.9
MELO3C012963.2 Cucumis melo HOM05D003500 ORTHO05D003919 5.8e-22 108.6 124 49.2
ClCG07G013080 Citrullus lanatus HOM05D003500 ORTHO05D003919 7.6e-22 108.2 128 48.4
Potri.003G055200 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.3e-21 107.5 137 50.4
Oeu000451.1 Olea europaea HOM05D003500 ORTHO05D003919 1.7e-21 107.1 197 39.1
COL.COLO4_30382 Corchorus olitorius HOM05D003500 ORTHO05D003919 2.2e-21 106.7 169 42.0
PGR102G2146 Punica granatum HOM05D003500 ORTHO05D003919 2.2e-21 106.7 193 38.9
TAR624G1157 Trochodendron aralioides HOM05D003500 ORTHO05D003919 3.8e-21 105.9 149 50.3
Prupe.3G070800 Prunus persica HOM05D003500 ORTHO05D003919 6.5e-21 105.1 209 39.2
Sed0003187 Sechium edule HOM05D003500 ORTHO05D003919 8.4e-21 104.8 173 38.7
CsaV3_3G025090 Cucumis sativus L. HOM05D003500 ORTHO05D003919 1.9e-20 103.6 123 48.0
TWI18G0570 Tripterygium wilfordii HOM05D003500 ORTHO05D003919 1.9e-20 103.6 167 44.9
MD17G1194800 Malus domestica HOM05D003500 ORTHO05D003919 5.5e-20 102.1 151 49.7
Sed0015651 Sechium edule HOM05D003500 ORTHO05D003919 7.1e-20 101.7 127 44.1
Gohir.A02G121400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 9.3e-20 101.3 135 44.4
Manes.11G047100 Manihot esculenta HOM05D003500 ORTHO05D003919 2.1e-19 100.1 119 52.9
Gorai.002G059400 Gossypium raimondii HOM05D003500 ORTHO05D003919 4.6e-19 99.0 125 46.4
Sabra03G0031200 Salix brachista HOM05D003500 ORTHO05D003919 1.0e-18 97.8 130 49.2
Gohir.D03G063800 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.3e-18 97.4 125 44.8
Actinidia32755 Actinidia chinensis HOM05D003500 ORTHO05D003919 3.0e-18 96.3 86 65.1
FvH4_6g31220 Fragaria vesca HOM05D003500 ORTHO05D003919 3.9e-18 95.9 111 55.9
FAN14G5419 Fragaria x ananassa HOM05D003500 ORTHO05D003919 3.9e-18 95.9 111 55.9
RcHm_v2.0_Chr2g0137891 Rosa chinensis HOM05D003500 ORTHO05D003919 5.1e-18 95.5 109 55.0
CANSAT56G2888 Cannabis sativa HOM05D003500 ORTHO05D003919 6.7e-18 95.1 113 51.3
Ciclev10027012m.g Citrus clementina HOM05D003500 ORTHO05D003919 8.7e-18 94.7 134 45.5
SGA_v2.0_scaffold37G14827 Striga asiatica HOM05D003500 ORTHO05D003919 8.7e-18 94.7 110 51.8
Sc12g0009290 Simmondsia chinensis HOM05D003500 ORTHO05D003919 2.5e-17 93.2 138 45.7
Migut.I00867 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.3e-17 92.4 196 36.2
MSTRG.4733 Avicennia marina HOM05D003500 ORTHO05D003919 5.7e-17 92.0 105 49.5
Solyc03g120180.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 2.1e-16 90.1 112 46.4
Migut.D01030 Erythranthe guttata HOM05D003500 ORTHO05D003919 4.8e-16 89.0 186 34.4
Manes.04G123600 Manihot esculenta HOM05D003500 ORTHO05D003919 4.8e-16 89.0 120 50.0
SGA_v2.0_scaffold68G23002 Striga asiatica HOM05D003500 ORTHO05D003919 5.3e-15 85.5 98 51.0
VMungo0331G1412 Vigna mungo HOM05D003500 ORTHO05D003919 5.3e-15 85.5 207 35.7
Eucgr.F03015 Eucalyptus grandis HOM05D003500 ORTHO05D003919 9.0e-15 84.7 144 41.0
Glyma.07G006100 Glycine max HOM05D003500 ORTHO05D003919 5.8e-14 82.0 144 38.9
Glyma.08G206700 Glycine max HOM05D003500 ORTHO05D003919 1.3e-13 80.9 108 48.1
SalBow2G3431 Salvia bowleyana HOM05D003500 ORTHO05D003919 1.7e-13 80.5 101 49.5
CSS0048332 Camellia sinensis var. sinensis HOM05D003500 ORTHO05D003919 8.4e-13 78.2 144 41.7
Ca_20390_v3 Cicer arietinum L. HOM05D003500 ORTHO05D003919 1.4e-12 77.4 104 48.1
Medtr4g012520 Medicago truncatula HOM05D003500 ORTHO05D003919 2.5e-12 76.6 105 45.7
Dinv30238 Davidia involucrata HOM05D003500 ORTHO05D003919 7.1e-12 75.1 171 36.8
Lalb_Chr04g0262681 Lupinus albus HOM05D003500 ORTHO05D003919 1.6e-11 73.9 145 37.9
Dinv14210 Davidia involucrata HOM05D003500 ORTHO05D003919 7.9e-11 71.6 170 35.9
Potri.018G035800 Populus trichocarpa HOM05D003500 ORTHO05D003919 1.3e-10 70.9 200 32.0
CiPaw.07G208500 Carya illinoinensis HOM05D003500 ORTHO05D003919 2.3e-10 70.1 155 38.7
Psat7g252240 Pisum sativum HOM05D003500 ORTHO05D003919 3.0e-10 69.7 102 42.2
Cfa013328 Carpinus fangiana HOM05D003500 ORTHO05D003919 1.1e-09 67.8 148 39.2
Haze_21819 Corylus avellana HOM05D003500 ORTHO05D003919 2.5e-09 66.6 153 39.2
Lj3g0021763 Lotus japonicus HOM05D003500 ORTHO05D003919 2.5e-09 66.6 108 43.5
Duzib168G0612 Durio zibethinus HOM05D003500 ORTHO05D003919 3.3e-09 66.2 118 42.4
QL12p026085 Quercus lobata HOM05D003500 ORTHO05D003919 4.3e-09 65.9 130 39.2
GSVIVG01035753001 Vitis vinifera HOM05D003500 ORTHO05D003919 5.7e-09 65.5 111 45.0
THA.LOC104810618 Tarenaya hassleriana HOM05D003500 ORTHO05D003919 7.4e-09 65.1 106 48.1
Actinidia14650 Actinidia chinensis HOM05D003500 ORTHO05D003919 9.7e-09 64.7 174 36.8
Aqoxy7G01735 Aquilegia oxysepala HOM05D003500 ORTHO05D003919 9.7e-09 64.7 107 42.1
Sabra18G0036300 Salix brachista HOM05D003500 ORTHO05D003919 9.7e-09 64.7 200 31.5
PSO063G0209 Papaver somniferum HOM05D003500 ORTHO05D003919 1.3e-08 64.3 87 51.7
arahy.Tifrunner.gnm1.ann1.Y86J0E Arachis hypogaea HOM05D003500 ORTHO05D003919 2.2e-08 63.5 111 41.4
PSO782G3147 Papaver somniferum HOM05D003500 ORTHO05D003919 2.2e-08 63.5 87 52.9
SHI10927 Sapria himalayana HOM05D003500 ORTHO05D003919 2.8e-08 63.2 106 41.5
arahy.Tifrunner.gnm1.ann1.AD7SDK Arachis hypogaea HOM05D003500 ORTHO05D003919 4.8e-08 62.4 111 40.5
Phvul.010G150500 Phaseolus vulgaris HOM05D003500 ORTHO05D003919 4.8e-08 62.4 110 45.5
Thhalv10012010m.g Eutrema salsugineum HOM05D003500 ORTHO05D003919 6.3e-08 62.0 159 35.8
CARHR042490 Cardamine hirsuta HOM05D003500 ORTHO05D003919 8.2e-08 61.6 166 33.1
Atru.chr7.2303 Acer truncatum HOM05D003500 ORTHO05D003919 1.1e-07 61.2 118 39.0
Carub.0001s4135 Capsella rubella HOM05D003500 ORTHO05D003919 1.1e-07 61.2 142 35.9
AL1G60570 Arabidopsis lyrata HOM05D003500 ORTHO05D003919 1.4e-07 60.8 142 35.9
Thecc.09G037900 Theobroma cacao HOM05D003500 ORTHO05D003919 1.4e-07 60.8 109 40.4
Lalb_Chr01g0012691 Lupinus albus HOM05D003500 ORTHO05D003919 2.4e-07 60.1 133 33.8
RcHm_v2.0_Chr6g0305551 Rosa chinensis HOM05D003500 ORTHO05D003919 2.4e-07 60.1 80 47.5
BcaB02g11002 Brassica carinata HOM05D003500 ORTHO05D003919 3.1e-07 59.7 141 36.2
Duzib187G1538 Durio zibethinus HOM05D003500 ORTHO05D003919 3.1e-07 59.7 72 52.8
Gohir.A07G024400 Gossypium hirsutum HOM05D003500 ORTHO05D003919 3.1e-07 59.7 156 34.0
AT1G52343 Arabidopsis thaliana HOM05D003500 ORTHO05D003919 4.1e-07 59.3 166 31.9
SalBow2G0526 Salvia bowleyana HOM05D003500 ORTHO05D003919 5.3e-07 58.9 103 38.8
Manes.16G069800 Manihot esculenta HOM05D003500 ORTHO05D003919 6.9e-07 58.5 95 42.1
Sp1g38960 Schrenkiella parvula HOM05D003500 ORTHO05D003919 6.9e-07 58.5 114 37.7
Solyc08g068060.3 Solanum lycopersicum HOM05D003500 ORTHO05D003919 9.0e-07 58.2 145 34.5
Gohir.D07G028000 Gossypium hirsutum HOM05D003500 ORTHO05D003919 1.2e-06 57.8 156 32.7
MBI11_g07535_MAGBIO Magnolia biondii HOM05D003500 ORTHO05D003919 1.2e-06 57.8 104 39.4
C06p07810 Brassica napus HOM05D003500 ORTHO05D003919 1.5e-06 57.4 112 39.3
BraA06t23403Z Brassica rapa HOM05D003500 ORTHO05D003919 1.5e-06 57.4 142 35.9
ClCG08G012430 Citrullus lanatus HOM05D003500 ORTHO05D003919 1.5e-06 57.4 176 29.0
Rhsim07G0154900 Rhododendron simsii HOM05D003500 ORTHO05D003919 1.5e-06 57.4 162 33.3
A06p01860 Brassica napus HOM05D003500 ORTHO05D003919 2.0e-06 57.0 112 38.4
BolC6t35867H Brassica oleracea HOM05D003500 ORTHO05D003919 2.0e-06 57.0 112 38.4
TPR.G21779 Trifolium pratense HOM05D003500 ORTHO05D003919 2.0e-06 57.0 141 31.2
BcaC08g43415 Brassica carinata HOM05D003500 ORTHO05D003919 2.6e-06 56.6 112 38.4
CANSAT35G1218 Cannabis sativa HOM05D003500 ORTHO05D003919 2.6e-06 56.6 109 39.4
FvH4_2g36330 Fragaria vesca HOM05D003500 ORTHO05D003919 2.6e-06 56.6 83 43.4
FAN27G2449 Fragaria x ananassa HOM05D003500 ORTHO05D003919 2.6e-06 56.6 83 43.4
Gorai.001G029300 Gossypium raimondii HOM05D003500 ORTHO05D003919 2.6e-06 56.6 103 38.8
Lj8A606T22 Lonicera japonica HOM05D003500 ORTHO05D003919 2.6e-06 56.6 120 37.5
Nitab4.5_0002393g0050 Nicotiana tabacum HOM05D003500 ORTHO05D003919 3.4e-06 56.2 151 34.4
FAN20G2191 Fragaria x ananassa HOM05D003500 ORTHO05D003919 4.5e-06 55.8 83 43.4
Actinidia15719 Actinidia chinensis HOM05D003500 ORTHO05D003919 5.9e-06 55.5 83 47.0
unitig_899.g14777 Utricularia gibba HOM05D003500 ORTHO05D003919 5.9e-06 55.5 112 39.3
Sc09g0008940 Simmondsia chinensis HOM05D003500 ORTHO05D003919 7.7e-06 55.1 181 28.7
PGSC0003DMG400014491 Solanum tuberosum HOM05D003500 ORTHO05D003919 1.0e-05 54.7 144 31.2
VMungo1127G1234 Vigna mungo HOM05D003500 ORTHO05D003919 1.0e-05 54.7 102 39.2


User provided reference genes

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