Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016261 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 2.6e-59 231.9 117 100.0
CSS0025501 Camellia sinensis var. sinensis HOM05D007735 ORTHO05D009638 3.3e-30 135.2 120 63.3
Cfa007115 Carpinus fangiana HOM05D007735 ORTHO05D009638 2.4e-25 119.0 141 52.5
QL06p053348 Quercus lobata HOM05D007735 ORTHO05D009638 3.2e-25 118.6 136 50.0
Cc07_g12240 Coffea canephora HOM05D007735 ORTHO05D009638 7.0e-25 117.5 141 46.1
Nn5g31061 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.7e-24 115.5 119 58.0
FAN23G3070 Fragaria x ananassa HOM05D007735 ORTHO05D009638 7.8e-24 114.0 119 54.6
Thecc.01G001800 Theobroma cacao HOM05D007735 ORTHO05D009638 7.8e-24 114.0 134 51.5
FvH4_1g09950 Fragaria vesca HOM05D007735 ORTHO05D009638 1.7e-23 112.8 125 51.2
FAN19G1654 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.7e-23 112.8 125 51.2
Potri.011G145200 Populus trichocarpa HOM05D007735 ORTHO05D009638 2.3e-23 112.5 133 49.6
FAN28G1635 Fragaria x ananassa HOM05D007735 ORTHO05D009638 3.0e-23 112.1 125 50.4
RcHm_v2.0_Chr2g0096741 Rosa chinensis HOM05D007735 ORTHO05D009638 3.3e-22 108.6 116 50.0
Manes.01G157700 Manihot esculenta HOM05D007735 ORTHO05D009638 7.3e-22 107.5 123 49.6
Peaxi162Scf00918g00052 Petunia axillaris HOM05D007735 ORTHO05D009638 1.6e-21 106.3 130 49.2
Prupe.7G187700 Prunus persica HOM05D007735 ORTHO05D009638 2.1e-21 105.9 138 50.0
PGSC0003DMG400013637 Solanum tuberosum HOM05D007735 ORTHO05D009638 8.0e-21 104.0 134 45.5
TAR381G1223 Trochodendron aralioides HOM05D007735 ORTHO05D009638 8.0e-21 104.0 119 52.1
Solyc02g082240.1 Solanum lycopersicum HOM05D007735 ORTHO05D009638 1.1e-20 103.6 135 45.9
Sopen02g026900 Solanum pennellii HOM05D007735 ORTHO05D009638 1.1e-20 103.6 134 46.3
FAN23G2983 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-20 102.8 110 50.9
FAN26G0974 Fragaria x ananassa HOM05D007735 ORTHO05D009638 1.8e-20 102.8 110 50.9
ECA246G0225 Erigeron canadensis HOM05D007735 ORTHO05D009638 2.3e-20 102.4 114 54.4
Glyma.16G114400 Glycine max HOM05D007735 ORTHO05D009638 4.0e-20 101.7 128 45.3
Manes.02G117000 Manihot esculenta HOM05D007735 ORTHO05D009638 6.8e-20 100.9 124 45.2
Nitab4.5_0006309g0010 Nicotiana tabacum HOM05D007735 ORTHO05D009638 6.8e-20 100.9 113 51.3
Sabra16G0309000 Salix brachista HOM05D007735 ORTHO05D009638 6.8e-20 100.9 131 48.1
Sabra11G0130300 Salix brachista HOM05D007735 ORTHO05D009638 1.2e-19 100.1 125 48.8
Aqoxy6G03024 Aquilegia oxysepala HOM05D007735 ORTHO05D009638 1.5e-19 99.8 127 48.0
Sc03g0004120 Simmondsia chinensis HOM05D007735 ORTHO05D009638 1.5e-19 99.8 116 47.4
Nitab4.5_0000855g0160 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.0e-19 99.4 135 43.7
VMungo0251G0553 Vigna mungo HOM05D007735 ORTHO05D009638 5.8e-19 97.8 115 48.7
Glyma.09G195900 Glycine max HOM05D007735 ORTHO05D009638 7.5e-19 97.4 126 44.4
DCAR_014121 Daucus carota HOM05D007735 ORTHO05D009638 9.8e-19 97.1 113 55.8
DCAR_014122 Daucus carota HOM05D007735 ORTHO05D009638 9.8e-19 97.1 113 55.8
Nitab4.5_0004448g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.7e-18 96.3 137 43.8
Oeu045753.2 Olea europaea HOM05D007735 ORTHO05D009638 1.7e-18 96.3 121 43.8
Eucgr.I02199 Eucalyptus grandis HOM05D007735 ORTHO05D009638 2.2e-18 95.9 151 39.7
Oeu043409.2 Olea europaea HOM05D007735 ORTHO05D009638 2.9e-18 95.5 125 44.0
Potri.001G456700 Populus trichocarpa HOM05D007735 ORTHO05D009638 3.7e-18 95.1 110 50.9
TPR.G19311 Trifolium pratense HOM05D007735 ORTHO05D009638 4.9e-18 94.7 121 45.5
Glyma.01G156500 Glycine max HOM05D007735 ORTHO05D009638 2.4e-17 92.4 135 42.2
Lalb_Chr05g0229481 Lupinus albus HOM05D007735 ORTHO05D009638 2.4e-17 92.4 113 48.7
Medtr8g072610 Medicago truncatula HOM05D007735 ORTHO05D009638 3.2e-17 92.0 121 45.5
Lalb_Chr05g0214991 Lupinus albus HOM05D007735 ORTHO05D009638 9.2e-17 90.5 111 47.7
Phvul.002G119100 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 9.2e-17 90.5 135 41.5
VMungo1215G0699 Vigna mungo HOM05D007735 ORTHO05D009638 9.2e-17 90.5 136 42.6
Lsat_1_v5_gn_3_69161 Lactuca sativa HOM05D007735 ORTHO05D009638 1.2e-16 90.1 112 50.9
Lalb_Chr09g0324871 Lupinus albus HOM05D007735 ORTHO05D009638 1.2e-16 90.1 132 43.9
Glyma.11G088300 Glycine max HOM05D007735 ORTHO05D009638 1.6e-16 89.7 136 45.6
Lalb_Chr16g0380221 Lupinus albus HOM05D007735 ORTHO05D009638 1.6e-16 89.7 134 44.8
PGSC0003DMG400018690 Solanum tuberosum HOM05D007735 ORTHO05D009638 2.1e-16 89.4 121 44.6
Lsat_1_v5_gn_2_74220 Lactuca sativa HOM05D007735 ORTHO05D009638 2.7e-16 89.0 117 51.3
Gohir.A05G393900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 6.0e-16 87.8 123 48.0
Gorai.012G025100 Gossypium raimondii HOM05D007735 ORTHO05D009638 7.8e-16 87.4 123 45.5
Nn6g31607 Nelumbo nucifera HOM05D007735 ORTHO05D009638 2.3e-15 85.9 127 46.5
Eucgr.J02566 Eucalyptus grandis HOM05D007735 ORTHO05D009638 3.0e-15 85.5 153 40.5
Gohir.D04G020900 Gossypium hirsutum HOM05D007735 ORTHO05D009638 3.0e-15 85.5 123 44.7
Phvul.003G272000 Phaseolus vulgaris HOM05D007735 ORTHO05D009638 5.1e-15 84.7 112 43.8
Psat4g107200 Pisum sativum HOM05D007735 ORTHO05D009638 6.6e-15 84.3 115 45.2
Sed0019252 Sechium edule HOM05D007735 ORTHO05D009638 8.6e-15 84.0 107 48.6
LjContig00247g0020335 Lotus japonicus HOM05D007735 ORTHO05D009638 1.2e-13 80.1 125 43.2
PGSC0003DMG400015147 Solanum tuberosum HOM05D007735 ORTHO05D009638 1.2e-13 80.1 100 45.0
Medtr5g024910 Medicago truncatula HOM05D007735 ORTHO05D009638 2.1e-13 79.3 140 37.9
Ca_25020_v3 Cicer arietinum L. HOM05D007735 ORTHO05D009638 4.7e-13 78.2 137 40.9
Lsat_1_v5_gn_8_114121 Lactuca sativa HOM05D007735 ORTHO05D009638 6.2e-13 77.8 126 44.4
SGA_v2.0_scaffold2G00933 Striga asiatica HOM05D007735 ORTHO05D009638 2.3e-12 75.9 129 38.8
TPR.G33757 Trifolium pratense HOM05D001957 ORTHO05D002015 3.1e-12 75.5 140 38.6
CiPaw.07G000500 Carya illinoinensis HOM05D007735 ORTHO05D009638 4.0e-12 75.1 103 51.5
Cpa.g.sc6.350 Carica papaya HOM05D007735 ORTHO05D009638 5.2e-12 74.7 109 46.8
CsaV3_3G000130 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.2e-11 73.6 108 46.3
CsaV3_UNG155170 Cucumis sativus L. HOM05D007735 ORTHO05D009638 1.2e-11 73.6 108 46.3
Migut.H02268 Erythranthe guttata HOM05D007735 ORTHO05D009638 1.2e-11 73.6 128 37.5
Psat2g147360 Pisum sativum HOM05D007735 ORTHO05D009638 1.5e-11 73.2 143 37.1
Lsat_1_v5_gn_8_114101 Lactuca sativa HOM05D007735 ORTHO05D009638 2.0e-11 72.8 121 43.0
SGA_v2.0_scaffold108G30951 Striga asiatica HOM05D007735 ORTHO05D009638 2.0e-11 72.8 128 36.7
COL.COLO4_22568 Corchorus olitorius HOM05D007735 ORTHO05D009638 2.6e-11 72.4 124 45.2
ClCG10G000110 Citrullus lanatus HOM05D007735 ORTHO05D009638 5.8e-11 71.2 104 45.2
Migut.H02270 Erythranthe guttata HOM05D007735 ORTHO05D009638 5.8e-11 71.2 128 36.7
Nitab4.5_0004507g0030 Nicotiana tabacum HOM05D007735 ORTHO05D009638 7.5e-11 70.9 111 40.5
MELO3C013706.2 Cucumis melo HOM05D007735 ORTHO05D009638 1.3e-10 70.1 107 44.9
Lj2g0017807 Lotus japonicus HOM05D007735 ORTHO05D009638 2.2e-10 69.3 140 39.3
Haze_22869 Corylus avellana HOM05D007735 ORTHO05D009638 2.9e-10 68.9 123 43.1
CiPaw.07G132500 Carya illinoinensis HOM05D007735 ORTHO05D009638 3.7e-10 68.6 120 38.3
ATR0605G038 Amborella trichopoda HOM05D007735 ORTHO05D009638 6.4e-10 67.8 88 51.1
Nitab4.5_0000235g0170 Nicotiana tabacum HOM05D007735 ORTHO05D009638 2.4e-09 65.9 69 49.3
arahy.Tifrunner.gnm1.ann1.Q37N58 Arachis hypogaea HOM05D007735 ORTHO05D009638 3.2e-09 65.5 107 45.8
arahy.Tifrunner.gnm1.ann1.S9U9HD Arachis hypogaea HOM05D007735 ORTHO05D009638 3.2e-09 65.5 107 45.8
Atru.chr3.61 Acer truncatum HOM05D007735 ORTHO05D009638 1.6e-08 63.2 65 52.3
Nitab4.5_0000304g0050 Nicotiana tabacum HOM05D007735 ORTHO05D009638 1.3e-07 60.1 91 41.8
arahy.Tifrunner.gnm1.ann1.KD7YUX Arachis hypogaea HOM05D007735 ORTHO05D009638 1.1e-06 57.0 124 37.9
HPP92_018900 Vanilla planifolia HOM05D026889 ORTHO05D009638 5.6e-06 54.7 90 42.2


User provided reference genes

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