Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016240 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 2.2e-54 215.3 104 100.0
CSS0003927 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 2.1e-25 119.0 67 88.1
CSS0033902 Camellia sinensis var. sinensis HOM05D006126 ORTHO05D007792 2.1e-25 119.0 67 88.1
Dinv11896 Davidia involucrata HOM05D006126 ORTHO05D007792 2.1e-25 119.0 67 88.1
Actinidia37776 Actinidia chinensis HOM05D006126 ORTHO05D007792 6.2e-25 117.5 67 85.1
Manes.08G037100 Manihot esculenta HOM05D006126 ORTHO05D007792 1.8e-24 115.9 67 83.6
QL07p026395 Quercus lobata HOM05D006126 ORTHO05D007792 1.8e-24 115.9 66 84.8
Rhsim03G0058700 Rhododendron simsii HOM05D006126 ORTHO05D007792 1.8e-24 115.9 67 83.6
ClCG10G017990 Citrullus lanatus HOM05D006126 ORTHO05D007792 3.1e-24 115.2 67 85.1
MELO3C009571.2 Cucumis melo HOM05D006126 ORTHO05D007792 3.1e-24 115.2 67 85.1
MD14G1044400 Malus domestica HOM05D006126 ORTHO05D007792 3.1e-24 115.2 67 83.6
Potri.016G066000 Populus trichocarpa HOM05D006126 ORTHO05D007792 3.1e-24 115.2 67 82.1
PSO384G0472 Papaver somniferum HOM05D006126 ORTHO05D007792 5.3e-24 114.4 67 80.6
Potri.006G199600 Populus trichocarpa HOM05D006126 ORTHO05D007792 5.3e-24 114.4 67 80.6
Atru.chr8.1287 Acer truncatum HOM05D006126 ORTHO05D007792 6.9e-24 114.0 67 83.6
Sed0001019 Sechium edule HOM05D006126 ORTHO05D007792 6.9e-24 114.0 67 83.6
Aqoxy2G00644 Aquilegia oxysepala HOM05D006126 ORTHO05D007792 9.0e-24 113.6 67 83.6
Cfa020070 Carpinus fangiana HOM05D006126 ORTHO05D007792 9.0e-24 113.6 67 85.1
Haze_20125 Corylus avellana HOM05D006126 ORTHO05D007792 9.0e-24 113.6 67 85.1
Prupe.7G089400 Prunus persica HOM05D006126 ORTHO05D007792 9.0e-24 113.6 67 82.1
GSVIVG01022527001 Vitis vinifera HOM05D006126 ORTHO05D007792 9.0e-24 113.6 67 83.6
EL10Ac5g11809 Beta vulgaris HOM05D006126 ORTHO05D007792 1.5e-23 112.8 67 82.1
DCAR_013459 Daucus carota HOM05D006126 ORTHO05D007792 1.5e-23 112.8 67 82.1
PSO339G3826 Papaver somniferum HOM05D006126 ORTHO05D007792 1.5e-23 112.8 67 79.1
TAR633G2701 Trochodendron aralioides HOM05D006126 ORTHO05D007792 2.0e-23 112.5 67 82.1
CANSAT64G0080 Cannabis sativa HOM05D006126 ORTHO05D007792 2.6e-23 112.1 67 82.1
CARHR006510 Cardamine hirsuta HOM05D006126 ORTHO05D007792 2.6e-23 112.1 67 82.1
Lj5g0022903 Lotus japonicus HOM05D006126 ORTHO05D007792 2.6e-23 112.1 67 82.1
Psat6g087240 Pisum sativum HOM05D006126 ORTHO05D007792 3.4e-23 111.7 67 80.6
TPR.G21232 Trifolium pratense HOM05D006126 ORTHO05D007792 3.4e-23 111.7 67 80.6
Ah.12g059600 Amaranthus hybridus HOM05D006126 ORTHO05D007792 4.5e-23 111.3 67 80.6
Ca_11655_v3 Cicer arietinum L. HOM05D006126 ORTHO05D007792 4.5e-23 111.3 67 80.6
Cc06_g06950 Coffea canephora HOM05D006126 ORTHO05D007792 4.5e-23 111.3 67 79.1
Thhalv10007141m.g Eutrema salsugineum HOM05D006126 ORTHO05D007792 4.5e-23 111.3 67 82.1
Phvul.007G265400 Phaseolus vulgaris HOM05D006126 ORTHO05D007792 4.5e-23 111.3 67 79.1
FvH4_6g21000 Fragaria vesca HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 80.6
FAN05G1377 Fragaria x ananassa HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 80.6
FAN05G2399 Fragaria x ananassa HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 80.6
FAN09G1524 Fragaria x ananassa HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 80.6
FAN14G0373 Fragaria x ananassa HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 80.6
Glyma.02G188200 Glycine max HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 79.1
Glyma.10G086700 Glycine max HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 79.1
RcHm_v2.0_Chr3g0477381 Rosa chinensis HOM05D006126 ORTHO05D007792 5.8e-23 110.9 67 80.6
Sp1g05550 Schrenkiella parvula HOM05D006126 ORTHO05D007792 7.6e-23 110.5 67 80.6
Gohir.A01G135800 Gossypium hirsutum HOM05D006126 ORTHO05D007792 1.0e-22 110.2 67 82.1
Gohir.D01G122900 Gossypium hirsutum HOM05D006126 ORTHO05D007792 1.0e-22 110.2 67 82.1
Gorai.002G153800 Gossypium raimondii HOM05D006126 ORTHO05D007792 1.0e-22 110.2 67 82.1
Hund10797 Selenicereus undatus HOM05D006126 ORTHO05D007792 1.0e-22 110.2 67 77.6
HanXRQChr08g0230681 Helianthus annuus HOM05D006126 ORTHO05D007792 1.3e-22 109.8 67 79.1
Lsat_1_v5_gn_9_13960 Lactuca sativa HOM05D006126 ORTHO05D007792 1.3e-22 109.8 67 79.1
Solyc10g081650.2 Solanum lycopersicum HOM05D006126 ORTHO05D007792 1.3e-22 109.8 67 79.1
Sopen10g032160 Solanum pennellii HOM05D006126 ORTHO05D007792 1.3e-22 109.8 67 79.1
PGSC0003DMG400028224 Solanum tuberosum HOM05D006126 ORTHO05D007792 1.3e-22 109.8 67 79.1
Ciclev10011230m.g Citrus clementina HOM05D006126 ORTHO05D007792 1.7e-22 109.4 67 79.1
COL.COLO4_29497 Corchorus olitorius HOM05D006126 ORTHO05D007792 1.7e-22 109.4 67 80.6
THA.LOC104823508 Tarenaya hassleriana HOM05D006126 ORTHO05D007792 1.7e-22 109.4 67 77.6
Aa31LG1G7850 Aethionema arabicum HOM05D006126 ORTHO05D007792 2.2e-22 109.0 67 80.6
CiPaw.09G023900 Carya illinoinensis HOM05D006126 ORTHO05D007792 2.2e-22 109.0 67 79.1
Duzib093G1994 Durio zibethinus HOM05D006126 ORTHO05D007792 2.2e-22 109.0 67 80.6
Medtr1g054965 Medicago truncatula HOM05D006126 ORTHO05D007792 2.2e-22 109.0 67 79.1
Peaxi162Scf00203g00033 Petunia axillaris HOM05D006126 ORTHO05D007792 2.2e-22 109.0 67 77.6
Lalb_Chr02g0154231 Lupinus albus HOM05D006126 ORTHO05D007792 2.9e-22 108.6 67 80.6
arahy.Tifrunner.gnm1.ann1.1KUK4G Arachis hypogaea HOM05D006126 ORTHO05D007792 3.8e-22 108.2 67 76.1
arahy.Tifrunner.gnm1.ann1.Y9G5AQ Arachis hypogaea HOM05D006126 ORTHO05D007792 3.8e-22 108.2 67 76.1
CAN.G674.36 Capsicum annuum HOM05D006126 ORTHO05D007792 3.8e-22 108.2 67 77.6
Nitab4.5_0000721g0080 Nicotiana tabacum HOM05D006126 ORTHO05D007792 3.8e-22 108.2 67 77.6
BcaC07g42047 Brassica carinata HOM05D006126 ORTHO05D007792 5.0e-22 107.8 67 79.1
A09p66770 Brassica napus HOM05D006126 ORTHO05D007792 5.0e-22 107.8 67 79.1
C08p50990 Brassica napus HOM05D006126 ORTHO05D007792 5.0e-22 107.8 67 79.1
BolC8t52627H Brassica oleracea HOM05D006126 ORTHO05D007792 5.0e-22 107.8 67 79.1
BraA09t42015Z Brassica rapa HOM05D006126 ORTHO05D007792 5.0e-22 107.8 67 79.1
TWI53G0494 Tripterygium wilfordii HOM05D006126 ORTHO05D007792 5.0e-22 107.8 67 77.6
ECA247G0804 Erigeron canadensis HOM05D006126 ORTHO05D007792 6.5e-22 107.5 67 76.1
AL1G16820 Arabidopsis lyrata HOM05D006126 ORTHO05D007792 8.4e-22 107.1 67 79.1
AT1G06820 Arabidopsis thaliana HOM05D006126 ORTHO05D007792 8.4e-22 107.1 67 79.1
Carub.0001s0613 Capsella rubella HOM05D006126 ORTHO05D007792 8.4e-22 107.1 67 79.1
AUR62038430 Chenopodium quinoa HOM05D006126 ORTHO05D007792 8.4e-22 107.1 67 77.6
Eucgr.A02546 Eucalyptus grandis HOM05D006126 ORTHO05D007792 8.4e-22 107.1 67 79.1
Nn2g14414 Nelumbo nucifera HOM05D006126 ORTHO05D007792 8.4e-22 107.1 67 79.1
Cpa.g.sc222.16 Carica papaya HOM05D006126 ORTHO05D007792 1.1e-21 106.7 67 79.1
CDE06G1404 Ceratophyllum demersum HOM05D006126 ORTHO05D007792 1.4e-21 106.3 67 74.6
AUR62036324 Chenopodium quinoa HOM05D006126 ORTHO05D007792 1.4e-21 106.3 67 76.1
MD12G1045800 Malus domestica HOM05D006126 ORTHO05D007792 1.9e-21 105.9 61 85.2
Os11g0572700 Oryza sativa ssp. japonica HOM05D006126 ORTHO05D007792 1.9e-21 105.9 67 76.1
Thecc.05G109900 Theobroma cacao HOM05D006126 ORTHO05D007792 1.9e-21 105.9 67 79.1
Zm00001eb114270 Zea mays HOM05D006126 ORTHO05D007792 1.9e-21 105.9 67 76.1
SGA_v2.0_scaffold184G40037 Striga asiatica HOM05D006126 ORTHO05D007792 3.2e-21 105.1 67 74.6
Nitab4.5_0004995g0010 Nicotiana tabacum HOM05D006126 ORTHO05D007792 4.2e-21 104.8 67 76.1
Zm00001eb200170 Zea mays HOM05D006126 ORTHO05D007792 5.5e-21 104.4 67 76.1
Aa31LG1G7870 Aethionema arabicum HOM05D006126 ORTHO05D007792 9.3e-21 103.6 70 77.1
RcHm_v2.0_Chr7g0212011 Rosa chinensis HOM05D006126 ORTHO05D007792 2.1e-20 102.4 67 76.1
TPR.G36046 Trifolium pratense HOM05D006126 ORTHO05D007792 2.1e-20 102.4 61 82.0
MBI05_g40561_MAGBIO Magnolia biondii HOM05D006126 ORTHO05D007792 2.7e-20 102.1 67 73.1
HPP92_002245 Vanilla planifolia HOM05D006126 ORTHO05D007792 4.6e-20 101.3 67 74.6
Sabra16G0067300 Salix brachista HOM05D006126 ORTHO05D007792 7.9e-20 100.5 94 58.5
unitig_578.g16481 Utricularia gibba HOM05D006126 ORTHO05D007792 7.9e-20 100.5 67 73.1
Migut.L01843 Erythranthe guttata HOM05D006126 ORTHO05D007792 1.0e-19 100.1 67 71.6
Mapoly0010s0015 Marchantia polymorpha HOM05D006126 ORTHO05D007792 5.1e-19 97.8 67 68.7
VMungo0720G2782 Vigna mungo HOM05D006126 ORTHO05D007792 1.1e-18 96.7 59 78.0
Pp3c20_12140 Physcomitrium patens HOM05D006126 ORTHO05D007792 3.3e-18 95.1 75 61.3
Pp3c23_1220 Physcomitrium patens HOM05D006126 ORTHO05D007792 5.7e-18 94.4 67 65.7
SMO141G0109 Selaginella moellendorffii HOM05D006126 ORTHO05D007792 1.6e-17 92.8 67 64.2
arahy.Tifrunner.gnm1.ann1.DC9D8R Arachis hypogaea HOM05D006126 ORTHO05D000008 3.7e-17 91.7 59 72.9
CBR_g48125 Chara braunii HOM05D006126 ORTHO05D007792 7.7e-15 84.0 66 62.1
RcHm_v2.0_Chr3g0477371 Rosa chinensis HOM05D006126 ORTHO05D007792 6.5e-14 80.9 51 76.5
Lj1A1059G39 Lonicera japonica HOM05D006126 ORTHO05D007792 1.6e-12 76.3 43 79.1
VMungo0720G0659 Vigna mungo HOM05D006126 ORTHO05D007792 6.7e-11 70.9 41 82.9
Oeu063079.1 Olea europaea HOM05D006126 ORTHO05D007792 2.2e-09 65.9 42 73.8
Actinidia03855 Actinidia chinensis HOM05D006126 ORTHO05D007792 8.2e-09 63.9 43 81.4
Cre16.g651923 Chlamydomonas reinhardtii HOM05D006126 ORTHO05D007792 8.2e-09 63.9 63 52.4


User provided reference genes

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