Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016204 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 5.3e-41 170.6 89 100.0
CSS0001444 Camellia sinensis var. sinensis HOM05D005635 ORTHO05D006838 1.1e-25 119.8 88 75.0
Lj3C160T4 Lonicera japonica HOM05D005635 ORTHO05D006838 1.1e-25 119.8 92 68.5
vmacro00684 Vaccinium macrocarpon HOM05D005635 ORTHO05D006838 1.1e-25 119.8 92 69.6
Oeu017118.1 Olea europaea HOM05D005635 ORTHO05D006838 3.1e-25 118.2 91 64.8
Duzib151G1049 Durio zibethinus HOM05D005635 ORTHO05D006838 5.3e-25 117.5 84 72.6
Thecc.04G163300 Theobroma cacao HOM05D005635 ORTHO05D006838 5.3e-25 117.5 86 70.9
GSVIVG01038182001 Vitis vinifera HOM05D005635 ORTHO05D006838 1.2e-24 116.3 86 70.9
MBI07_g33481_MAGBIO Magnolia biondii HOM05D005635 ORTHO05D006838 2.0e-24 115.5 89 64.0
Hma1.2p1_1156F.1_g262300 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 5.9e-24 114.0 86 69.8
Hma1.2p1_1156F.1_g262310 Hydrangea macrophylla HOM05D005635 ORTHO05D006838 5.9e-24 114.0 86 69.8
Gohir.A09G213616 Gossypium hirsutum HOM05D005635 ORTHO05D006838 7.7e-24 113.6 84 71.4
Potri.013G128300 Populus trichocarpa HOM05D005635 ORTHO05D006838 7.7e-24 113.6 84 71.4
Gorai.006G232500 Gossypium raimondii HOM05D005635 ORTHO05D006838 1.0e-23 113.2 84 71.4
MD15G1148200 Malus domestica HOM05D005635 ORTHO05D006838 2.2e-23 112.1 92 65.2
Rhsim09G0007900 Rhododendron simsii HOM05D005635 ORTHO05D006838 2.9e-23 111.7 83 68.7
QL10p057166 Quercus lobata HOM05D005635 ORTHO05D006838 3.8e-23 111.3 86 68.6
QL10p057536 Quercus lobata HOM05D005635 ORTHO05D006838 3.8e-23 111.3 86 68.6
Cfa015678 Carpinus fangiana HOM05D005635 ORTHO05D006838 5.0e-23 110.9 85 68.2
Aa31LG10G14030 Aethionema arabicum HOM05D005635 ORTHO05D006838 8.5e-23 110.2 86 65.1
EL10Ac3g06107 Beta vulgaris HOM05D005635 ORTHO05D006838 1.5e-22 109.4 87 64.4
Psat5g100720 Pisum sativum HOM05D005635 ORTHO05D006838 1.5e-22 109.4 86 66.3
PGR042G2382 Punica granatum HOM05D005635 ORTHO05D006838 1.5e-22 109.4 84 69.0
Gohir.D09G212700 Gossypium hirsutum HOM05D005635 ORTHO05D006838 1.9e-22 109.0 84 69.0
Medtr3g084030 Medicago truncatula HOM05D005635 ORTHO05D006838 1.9e-22 109.0 86 67.4
VMungo1383G0014 Vigna mungo HOM05D005635 ORTHO05D006838 1.9e-22 109.0 86 67.4
BolC6t37802H Brassica oleracea HOM05D005635 ORTHO05D006838 2.5e-22 108.6 86 64.0
Hund22526 Selenicereus undatus HOM05D005635 ORTHO05D006838 2.5e-22 108.6 87 62.1
Nitab4.5_0000064g0020 Nicotiana tabacum HOM05D005635 ORTHO05D006838 3.2e-22 108.2 87 64.4
arahy.Tifrunner.gnm1.ann1.KV01DF Arachis hypogaea HOM05D005635 ORTHO05D006838 4.2e-22 107.8 87 66.7
CiPaw.01G169400 Carya illinoinensis HOM05D005635 ORTHO05D006838 4.2e-22 107.8 84 66.7
CANSAT56G0139 Cannabis sativa HOM05D005635 ORTHO05D006838 5.5e-22 107.5 84 65.5
ClCG08G017200 Citrullus lanatus HOM05D005635 ORTHO05D006838 5.5e-22 107.5 88 64.8
Dinv18319 Davidia involucrata HOM05D005635 ORTHO05D006838 5.5e-22 107.5 86 65.1
Eucgr.L00011 Eucalyptus grandis HOM05D005635 ORTHO05D006838 5.5e-22 107.5 86 64.0
Prupe.7G266600 Prunus persica HOM05D005635 ORTHO05D006838 5.5e-22 107.5 84 66.7
TWI15G0946 Tripterygium wilfordii HOM05D005635 ORTHO05D006838 5.5e-22 107.5 84 67.9
Gohir.A10G145200 Gossypium hirsutum HOM05D005635 ORTHO05D006838 7.2e-22 107.1 84 67.9
Gohir.D10G121800 Gossypium hirsutum HOM05D005635 ORTHO05D006838 7.2e-22 107.1 84 67.9
Gorai.011G133900 Gossypium raimondii HOM05D005635 ORTHO05D006838 7.2e-22 107.1 84 67.9
Nn7g37529 Nelumbo nucifera HOM05D005635 ORTHO05D006838 7.2e-22 107.1 86 61.6
arahy.Tifrunner.gnm1.ann1.0WSK8D Arachis hypogaea HOM05D005635 ORTHO05D006838 9.4e-22 106.7 87 65.5
Thhalv10005829m.g Eutrema salsugineum HOM05D005635 ORTHO05D006838 9.4e-22 106.7 84 65.5
TPR.G17194 Trifolium pratense HOM05D005635 ORTHO05D006838 9.4e-22 106.7 86 65.1
PSO832G1829 Papaver somniferum HOM05D005635 ORTHO05D006838 1.2e-21 106.3 83 65.1
BraA07t30126Z Brassica rapa HOM05D005635 ORTHO05D006838 1.6e-21 105.9 86 62.8
CsaV3_2G025410 Cucumis sativus L. HOM05D005635 ORTHO05D006838 1.6e-21 105.9 86 65.1
Migut.D00990 Erythranthe guttata HOM05D005635 ORTHO05D006838 1.6e-21 105.9 86 62.8
SalBow7G2884 Salvia bowleyana HOM05D005635 ORTHO05D006838 1.6e-21 105.9 85 65.9
BcaC08g45005 Brassica carinata HOM05D005635 ORTHO05D006838 2.1e-21 105.5 84 63.1
Cc03_g14460 Coffea canephora HOM05D005635 ORTHO05D006838 2.7e-21 105.1 89 61.8
Duzib212G0953 Durio zibethinus HOM05D005635 ORTHO05D006838 2.7e-21 105.1 84 66.7
FAN28G2262 Fragaria x ananassa HOM05D005635 ORTHO05D006838 2.7e-21 105.1 86 62.8
Phvul.001G267200 Phaseolus vulgaris HOM05D005635 ORTHO05D006838 2.7e-21 105.1 86 62.8
Sopen03g013370 Solanum pennellii HOM05D005635 ORTHO05D006838 3.6e-21 104.8 86 61.6
AL5G41820 Arabidopsis lyrata HOM05D005635 ORTHO05D006838 4.7e-21 104.4 84 63.1
Ca_16400_v3 Cicer arietinum L. HOM05D005635 ORTHO05D006838 4.7e-21 104.4 86 64.0
MELO3C010738.2 Cucumis melo HOM05D005635 ORTHO05D006838 4.7e-21 104.4 86 65.1
FAN23G1844 Fragaria x ananassa HOM05D005635 ORTHO05D006838 4.7e-21 104.4 86 62.8
RcHm_v2.0_Chr2g0085171 Rosa chinensis HOM05D005635 ORTHO05D006838 4.7e-21 104.4 84 64.3
Solyc03g059180.4 Solanum lycopersicum HOM05D005635 ORTHO05D006838 4.7e-21 104.4 86 60.5
AT3G59780 Arabidopsis thaliana HOM05D005635 ORTHO05D006838 8.0e-21 103.6 84 61.9
Manes.05G131200 Manihot esculenta HOM05D005635 ORTHO05D006838 8.0e-21 103.6 84 64.3
Lj6g0024009 Lotus japonicus HOM05D005635 ORTHO05D006838 1.0e-20 103.2 86 65.1
Sc19g0006380 Simmondsia chinensis HOM05D005635 ORTHO05D006838 1.0e-20 103.2 88 61.4
Atru.chr4.1498 Acer truncatum HOM05D005635 ORTHO05D006838 1.4e-20 102.8 86 66.3
CARHR170120 Cardamine hirsuta HOM05D005635 ORTHO05D006838 1.4e-20 102.8 84 63.1
PSO210G4833 Papaver somniferum HOM05D005635 ORTHO05D006838 1.4e-20 102.8 83 62.7
Sp5g03370 Schrenkiella parvula HOM05D005635 ORTHO05D006838 1.8e-20 102.4 84 61.9
A07p24820 Brassica napus HOM05D005635 ORTHO05D006838 2.3e-20 102.1 82 63.4
C06p26400 Brassica napus HOM05D005635 ORTHO05D006838 2.3e-20 102.1 82 63.4
DCAR_029617 Daucus carota HOM05D005635 ORTHO05D006838 2.3e-20 102.1 83 65.1
Glyma.18G001800 Glycine max HOM05D005635 ORTHO05D006838 2.3e-20 102.1 86 62.8
Sed0015570 Sechium edule HOM05D005635 ORTHO05D006838 5.2e-20 100.9 84 63.1
TAR362G0201 Trochodendron aralioides HOM05D005635 ORTHO05D006838 5.2e-20 100.9 79 64.6
BcaB02g07447 Brassica carinata HOM05D005635 ORTHO05D006838 6.8e-20 100.5 84 60.7
HanXRQChr02g0059091 Helianthus annuus HOM05D005635 ORTHO05D006838 8.8e-20 100.1 86 58.1
Atru.chr4.1471 Acer truncatum HOM05D005635 ORTHO05D006838 1.2e-19 99.8 84 65.5
Cpa.g.sc9.387 Carica papaya HOM05D005635 ORTHO05D006838 1.2e-19 99.8 84 60.7
FvH4_1g00540 Fragaria vesca HOM05D005635 ORTHO05D006838 1.2e-19 99.8 84 60.7
Sabra13G0107200 Salix brachista HOM05D005635 ORTHO05D006838 1.2e-19 99.8 80 66.2
AUR62002413 Chenopodium quinoa HOM05D005635 ORTHO05D006838 2.0e-19 99.0 86 57.0
Glyma.11G255300 Glycine max HOM05D005635 ORTHO05D006838 2.0e-19 99.0 86 60.5
MD02G1004500 Malus domestica HOM05D005635 ORTHO05D006838 2.6e-19 98.6 90 58.9
SalBow1G7464 Salvia bowleyana HOM05D005635 ORTHO05D006838 5.7e-19 97.4 90 56.7
THA.LOC104802334 Tarenaya hassleriana HOM05D005635 ORTHO05D006838 7.5e-19 97.1 84 59.5
Aqoxy5G00015 Aquilegia oxysepala HOM05D005635 ORTHO05D006838 9.8e-19 96.7 86 55.8
AUR62023776 Chenopodium quinoa HOM05D005635 ORTHO05D006838 1.3e-18 96.3 87 55.2
ECA233G1690 Erigeron canadensis HOM05D005635 ORTHO05D006838 2.8e-18 95.1 86 57.0
Lalb_Chr23g0278351 Lupinus albus HOM05D005635 ORTHO05D006838 4.8e-18 94.4 86 60.5
unitig_32.g10984 Utricularia gibba HOM05D005635 ORTHO05D006838 2.4e-17 92.0 82 58.5
Os01g0896500 Oryza sativa ssp. japonica HOM05D005635 ORTHO05D006838 1.2e-16 89.7 86 52.3
ATR0743G254 Amborella trichopoda HOM05D005635 ORTHO05D006838 1.0e-15 86.7 86 48.8
SGA_v2.0_scaffold66G22529 Striga asiatica HOM05D005635 ORTHO05D006838 1.0e-15 86.7 85 54.1
HPP92_007033 Vanilla planifolia HOM05D005635 ORTHO05D006838 3.8e-15 84.7 86 52.3
HPP92_007065 Vanilla planifolia HOM05D005635 ORTHO05D006838 3.8e-15 84.7 85 52.9
SEGI_21812 Sequoiadendron giganteum HOM05D005635 ORTHO05D006838 9.5e-14 80.1 86 45.3
Zm00001eb144770 Zea mays HOM05D005635 ORTHO05D006838 8.0e-13 77.0 86 45.3
Haze_00856 Corylus avellana HOM05D005635 ORTHO05D006838 5.2e-12 74.3 46 76.1
Peaxi162Scf00883g00320 Petunia axillaris HOM05D005635 ORTHO05D006838 1.5e-11 72.8 47 70.2
Nitab4.5_0002913g0010 Nicotiana tabacum HOM05D005635 ORTHO05D006838 4.4e-11 71.2 55 60.0
Lsat_1_v5_gn_6_67720 Lactuca sativa HOM05D005635 ORTHO05D006838 3.7e-10 68.2 49 61.2
FAN26G0446 Fragaria x ananassa HOM05D005635 ORTHO05D006838 4.9e-10 67.8 86 47.7
Sed0022147 Sechium edule HOM05D005635 ORTHO05D006838 4.9e-10 67.8 80 50.0
Mapoly0056s0110 Marchantia polymorpha HOM05D005635 ORTHO05D006838 2.0e-08 62.4 87 43.7
Pp3c5_10150 Physcomitrium patens HOM05D005635 ORTHO05D006838 2.0e-08 62.4 86 38.4
CBR_g30747 Chara braunii HOM05D005635 ORTHO05D006838 2.9e-07 58.5 82 40.2
AagrBONN_evm.TU.Sc2ySwM_344.4224 Anthoceros agrestis HOM05D005635 ORTHO05D006838 8.6e-07 57.0 85 34.1


User provided reference genes

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