Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016193 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.2e-111 405.6 199 100.0
CSS0046887 Camellia sinensis var. sinensis HOM05D006529 ORTHO05D008380 2.1e-90 335.9 200 87.0
Dinv42286 Davidia involucrata HOM05D006529 ORTHO05D008380 1.3e-84 316.6 207 72.0
Cfa003138 Carpinus fangiana HOM05D006529 ORTHO05D008380 4.3e-83 311.6 196 72.4
Actinidia29893 Actinidia chinensis HOM05D006529 ORTHO05D008380 9.0e-81 303.9 213 73.2
TAR624G0297 Trochodendron aralioides HOM05D006529 ORTHO05D008380 3.8e-79 298.5 204 70.1
vmacro06269 Vaccinium macrocarpon HOM05D006529 ORTHO05D008380 6.5e-79 297.7 202 74.3
Nitab4.5_0004011g0030 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.4e-78 296.6 196 71.9
Dinv36729 Davidia involucrata HOM05D006529 ORTHO05D008380 1.9e-78 296.2 198 72.2
FAN14G0658 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.9e-78 296.2 186 72.0
RcHm_v2.0_Chr2g0092481 Rosa chinensis HOM05D006529 ORTHO05D008380 1.9e-78 296.2 190 71.1
FAN23G2505 Fragaria x ananassa HOM05D006529 ORTHO05D008380 9.3e-78 293.9 192 69.8
FAN19G1593 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.2e-77 293.5 194 69.1
Lj7C671T1 Lonicera japonica HOM05D006529 ORTHO05D008380 1.2e-77 293.5 211 67.3
Atru.chr7.1518 Acer truncatum HOM05D006529 ORTHO05D008380 1.6e-77 293.1 198 69.2
FvH4_1g06740 Fragaria vesca HOM05D006529 ORTHO05D008380 1.6e-77 293.1 192 69.8
CiPaw.04G153200 Carya illinoinensis HOM05D006529 ORTHO05D008380 4.6e-77 291.6 196 68.9
MD02G1072300 Malus domestica HOM05D006529 ORTHO05D008380 7.9e-77 290.8 197 70.6
ECA240G3812 Erigeron canadensis HOM05D006529 ORTHO05D008380 1.0e-76 290.4 200 68.5
Prupe.7G215100 Prunus persica HOM05D006529 ORTHO05D008380 1.0e-76 290.4 197 70.1
GSVIVG01015253001 Vitis vinifera HOM05D006529 ORTHO05D008380 2.3e-76 289.3 198 70.2
Cc06_g10920 Coffea canephora HOM05D006529 ORTHO05D008380 3.0e-76 288.9 198 70.2
Hund07265 Selenicereus undatus HOM05D006529 ORTHO05D008380 1.9e-75 286.2 198 66.7
Eucgr.C00932 Eucalyptus grandis HOM05D006529 ORTHO05D008380 5.7e-75 284.6 203 66.0
Manes.16G105400 Manihot esculenta HOM05D006529 ORTHO05D008380 7.4e-75 284.3 203 66.5
Gohir.D05G029600 Gossypium hirsutum HOM05D006529 ORTHO05D008380 9.6e-75 283.9 198 65.7
Gorai.009G029800 Gossypium raimondii HOM05D006529 ORTHO05D008380 9.6e-75 283.9 198 65.7
Gohir.A05G027800 Gossypium hirsutum HOM05D006529 ORTHO05D008380 1.6e-74 283.1 198 65.7
Duzib150G0994 Durio zibethinus HOM05D006529 ORTHO05D008380 3.7e-74 282.0 192 67.2
DCAR_012008 Daucus carota HOM05D006529 ORTHO05D008380 4.8e-74 281.6 204 66.7
CAN.G142.8 Capsicum annuum HOM05D006529 ORTHO05D008380 1.8e-73 279.6 196 68.4
Ciclev10009577m.g Citrus clementina HOM05D006529 ORTHO05D008380 3.1e-73 278.9 197 67.0
Ah.06g190810 Amaranthus hybridus HOM05D006529 ORTHO05D008380 5.3e-73 278.1 198 65.7
AUR62000487 Chenopodium quinoa HOM05D006529 ORTHO05D008380 6.9e-73 277.7 198 65.7
Haze_25864 Corylus avellana HOM05D006529 ORTHO05D008380 1.2e-72 276.9 196 66.8
QL02p063543 Quercus lobata HOM05D006529 ORTHO05D008380 1.2e-72 276.9 236 56.4
Ca_17386_v3 Cicer arietinum L. HOM05D006529 ORTHO05D008380 1.5e-72 276.6 193 69.9
COL.COLO4_18251 Corchorus olitorius HOM05D006529 ORTHO05D008380 2.6e-72 275.8 211 63.5
MD15G1202100 Malus domestica HOM05D006529 ORTHO05D008380 2.6e-72 275.8 197 66.5
CANSAT56G2962 Cannabis sativa HOM05D006529 ORTHO05D008380 3.4e-72 275.4 177 73.4
Thecc.09G094900 Theobroma cacao HOM05D006529 ORTHO05D008380 3.4e-72 275.4 199 65.3
Glyma.08G031000 Glycine max HOM05D006529 ORTHO05D008380 7.6e-72 274.2 193 68.4
Nn8g38953 Nelumbo nucifera HOM05D006529 ORTHO05D008380 7.6e-72 274.2 204 64.7
Potri.006G153800 Populus trichocarpa HOM05D006529 ORTHO05D008380 1.0e-71 273.9 200 65.0
Lalb_Chr05g0223501 Lupinus albus HOM05D006529 ORTHO05D008380 1.7e-71 273.1 200 66.5
AUR62006831 Chenopodium quinoa HOM05D006529 ORTHO05D008380 2.2e-71 272.7 198 65.2
PGR142G1231 Punica granatum HOM05D006529 ORTHO05D008380 2.2e-71 272.7 203 64.0
ClCG03G015880 Citrullus lanatus HOM05D006529 ORTHO05D008380 2.9e-71 272.3 197 65.5
Oeu052123.2 Olea europaea HOM05D006529 ORTHO05D008380 6.5e-71 271.2 217 61.3
TWI63G1011 Tripterygium wilfordii HOM05D006529 ORTHO05D008380 1.9e-70 269.6 199 64.8
Thhalv10026289m.g Eutrema salsugineum HOM05D006529 ORTHO05D008380 3.2e-70 268.9 198 63.1
MSTRG.10586 Avicennia marina HOM05D006529 ORTHO05D008380 4.2e-70 268.5 196 65.3
A03p56550 Brassica napus HOM05D006529 ORTHO05D008380 5.5e-70 268.1 198 62.1
Sp7g24240 Schrenkiella parvula HOM05D006529 ORTHO05D008380 5.5e-70 268.1 198 63.6
Glyma.05G223900 Glycine max HOM05D006529 ORTHO05D008380 7.2e-70 267.7 193 66.8
AT4G26240 Arabidopsis thaliana HOM05D006529 ORTHO05D008380 1.2e-69 266.9 198 63.6
Lj4g0018594 Lotus japonicus HOM05D006529 ORTHO05D008380 1.2e-69 266.9 193 65.3
HanXRQChr09g0238511 Helianthus annuus HOM05D006529 ORTHO05D008380 2.7e-69 265.8 196 63.3
Medtr8g101990 Medicago truncatula HOM05D006529 ORTHO05D008380 2.7e-69 265.8 199 63.8
AL7G26720 Arabidopsis lyrata HOM05D006529 ORTHO05D008380 3.6e-69 265.4 198 64.1
CARHR233790 Cardamine hirsuta HOM05D006529 ORTHO05D008380 4.6e-69 265.0 198 62.1
arahy.Tifrunner.gnm1.ann1.YG2MQU Arachis hypogaea HOM05D006529 ORTHO05D008380 7.9e-69 264.2 200 62.5
Migut.K00572 Erythranthe guttata HOM05D006529 ORTHO05D008380 7.9e-69 264.2 196 67.9
C07p54750 Brassica napus HOM05D006529 ORTHO05D008380 1.0e-68 263.8 198 62.1
BolC7t45964H Brassica oleracea HOM05D006529 ORTHO05D008380 1.0e-68 263.8 198 62.1
Carub.0007s1471 Capsella rubella HOM05D006529 ORTHO05D008380 1.3e-68 263.5 198 63.1
VMungo0251G0255 Vigna mungo HOM05D006529 ORTHO05D008380 1.3e-68 263.5 193 64.2
arahy.Tifrunner.gnm1.ann1.HB8I5Y Arachis hypogaea HOM05D006529 ORTHO05D008380 5.1e-68 261.5 200 62.0
Aqoxy7G01329 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 2.5e-67 259.2 199 63.3
Nn6g35394 Nelumbo nucifera HOM05D006529 ORTHO05D008380 5.7e-67 258.1 204 61.8
Sed0011062 Sechium edule HOM05D006529 ORTHO05D008380 9.7e-67 257.3 191 65.4
BcaC06g32765 Brassica carinata HOM05D006529 ORTHO05D008380 2.2e-66 256.1 199 59.8
THA.LOC104813489 Tarenaya hassleriana HOM05D006529 ORTHO05D008380 2.8e-66 255.8 198 62.1
Psat7g019320 Pisum sativum HOM05D006529 ORTHO05D008380 6.3e-66 254.6 199 63.8
PSO832G0687 Papaver somniferum HOM05D006529 ORTHO05D008380 1.4e-65 253.4 199 60.8
BraA03t14725Z Brassica rapa HOM05D006529 ORTHO05D008380 1.8e-65 253.1 198 59.1
CDE05G3131 Ceratophyllum demersum HOM05D006529 ORTHO05D008380 2.0e-64 249.6 196 58.7
Aqoxy199s004 Aquilegia oxysepala HOM05D006529 ORTHO05D008380 5.9e-64 248.1 192 62.5
SGA_v2.0_scaffold210G42089 Striga asiatica HOM05D006529 ORTHO05D008380 5.9e-64 248.1 187 64.7
PSO063G6648 Papaver somniferum HOM05D006529 ORTHO05D008380 1.7e-63 246.5 199 59.8
Phvul.002G305700 Phaseolus vulgaris HOM05D006529 ORTHO05D008380 6.5e-63 244.6 193 62.2
SalBow1G6632 Salvia bowleyana HOM05D006529 ORTHO05D008380 3.2e-62 242.3 226 54.9
MELO3C015437.2 Cucumis melo HOM05D006529 ORTHO05D008380 9.4e-62 240.7 197 60.4
CsaV3_UNG050340 Cucumis sativus L. HOM05D006529 ORTHO05D008380 6.3e-58 228.0 136 72.1
TPR.G17281 Trifolium pratense HOM05D006529 ORTHO05D008380 1.4e-54 216.9 141 67.4
Peaxi162Scf00883g01013 Petunia axillaris HOM05D006529 ORTHO05D008380 1.9e-54 216.5 199 57.3
Lsat_1_v5_gn_7_38121 Lactuca sativa HOM05D006529 ORTHO05D008380 1.1e-51 207.2 153 64.1
FAN26G1500 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.7e-50 203.4 206 53.9
Os01g0559300 Oryza sativa ssp. japonica HOM05D006529 ORTHO05D008380 1.7e-50 203.4 182 53.8
CANSAT56G3512 Cannabis sativa HOM05D006529 ORTHO05D008380 7.0e-49 198.0 164 61.0
Zm00001eb356780 Zea mays HOM05D006529 ORTHO05D008380 1.6e-48 196.8 165 55.8
Sc18g0001790 Simmondsia chinensis HOM05D006529 ORTHO05D008380 1.3e-42 177.2 148 61.5
Aa31LG3G600 Aethionema arabicum HOM05D006529 ORTHO05D008380 5.0e-39 165.2 165 52.1
Cpa.g.sc78.59 Carica papaya HOM05D006529 ORTHO05D008380 1.1e-38 164.1 193 47.7
CsaV3_1G040070 Cucumis sativus L. HOM05D006529 ORTHO05D008380 1.1e-38 164.1 162 53.7
SalBow1G6389 Salvia bowleyana HOM05D006529 ORTHO05D008380 9.4e-38 161.0 135 57.8
FAN26G3434 Fragaria x ananassa HOM05D006529 ORTHO05D008380 2.1e-37 159.8 131 58.8
HanXRQChr03g0061021 Helianthus annuus HOM05D006529 ORTHO05D008380 1.3e-34 150.6 106 66.0
SHI02792 Sapria himalayana HOM05D006529 ORTHO05D008380 6.8e-28 128.3 119 48.7
HPP92_005506 Vanilla planifolia HOM05D006529 ORTHO05D008380 4.9e-26 122.1 166 41.0
SMO164G0011 Selaginella moellendorffii HOM05D006529 ORTHO05D008380 8.3e-26 121.3 165 38.2
Lalb_Chr09g0331701 Lupinus albus HOM05D006529 ORTHO05D008380 3.1e-25 119.4 69 76.8
Sabra06G0122000 Salix brachista HOM05D006529 ORTHO05D008380 4.5e-24 115.5 101 57.4
Nitab4.5_0009098g0020 Nicotiana tabacum HOM05D006529 ORTHO05D008380 1.3e-23 114.0 84 67.9
FAN27G1398 Fragaria x ananassa HOM05D006529 ORTHO05D008380 1.4e-20 104.0 76 63.2
Sabra06G0121800 Salix brachista HOM05D006529 ORTHO05D008380 5.2e-20 102.1 56 78.6
CBR_g10883 Chara braunii HOM05D006529 ORTHO05D008380 2.0e-19 100.1 191 33.5
HanXRQChr03g0061031 Helianthus annuus HOM05D006529 ORTHO05D008380 5.9e-16 88.6 84 51.2
SHI02791 Sapria himalayana HOM05D006529 ORTHO05D008380 7.3e-14 81.6 49 65.3
PGSC0003DMG400015618 Solanum tuberosum HOM05D006529 ORTHO05D008380 1.5e-11 73.9 74 55.4
Cre11.g467752 Chlamydomonas reinhardtii HOM05D006529 ORTHO05D008380 7.5e-11 71.6 202 28.2
Sopen08g011810 Solanum pennellii HOM05D006529 ORTHO05D008380 1.1e-09 67.8 73 45.2
Solyc08g041690.1 Solanum lycopersicum HOM05D006529 ORTHO05D008380 1.6e-08 63.9 34 76.5
RcHm_v2.0_Chr7g0226351 Rosa chinensis HOM05D006529 ORTHO05D008380 3.5e-08 62.8 58 58.6
Lalb_Chr09g0331711 Lupinus albus HOM05D006529 ORTHO05D008380 3.0e-07 59.7 45 60.0
Glyma.05G224100 Glycine max HOM05D006529 ORTHO05D008380 3.9e-07 59.3 31 67.7
FAN02G1845 Fragaria x ananassa HOM05D000599 ORTHO05D000554 5.0e-07 58.9 86 44.2


User provided reference genes

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