Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016187 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D008016 1.7e-60 235.7 115 100.0
Actinidia27081 Actinidia chinensis HOM05D006266 ORTHO05D008016 9.0e-25 117.1 78 79.5
Dinv44151 Davidia involucrata HOM05D006266 ORTHO05D008016 1.1e-22 110.2 78 74.4
Dinv44175 Davidia involucrata HOM05D006266 ORTHO05D008016 1.1e-22 110.2 78 74.4
ECA248G0977 Erigeron canadensis HOM05D006266 ORTHO05D008016 2.7e-21 105.5 80 67.5
TAR362G0699 Trochodendron aralioides HOM05D006266 ORTHO05D008016 2.7e-21 105.5 78 70.5
Aqoxy2G04160 Aquilegia oxysepala HOM05D006266 ORTHO05D008016 3.5e-21 105.1 78 70.5
Hma1.2p1_0324F.1_g125550 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.6e-21 104.8 78 70.5
Hma1.2p1_0324F.1_g125560 Hydrangea macrophylla HOM05D006266 ORTHO05D008016 4.6e-21 104.8 78 70.5
vmacro00635 Vaccinium macrocarpon HOM05D006266 ORTHO05D008016 4.6e-21 104.8 102 60.8
Migut.G01347 Erythranthe guttata HOM05D006266 ORTHO05D008016 7.9e-21 104.0 78 69.2
Pp3c26_13090 Physcomitrium patens HOM05D006266 ORTHO05D008016 7.9e-21 104.0 77 64.9
Thecc.04G175700 Theobroma cacao HOM05D006266 ORTHO05D008016 7.9e-21 104.0 78 71.8
Gohir.A10G139200 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.0e-20 103.6 78 69.2
Gohir.D10G127600 Gossypium hirsutum HOM05D006266 ORTHO05D008016 1.0e-20 103.6 78 69.2
Gorai.011G140700 Gossypium raimondii HOM05D006266 ORTHO05D008016 1.0e-20 103.6 78 69.2
PSO017G5469 Papaver somniferum HOM05D006266 ORTHO05D008016 1.0e-20 103.6 78 71.8
PSO675G5931 Papaver somniferum HOM05D006266 ORTHO05D008016 1.0e-20 103.6 78 71.8
Ciclev10019615m.g Citrus clementina HOM05D006266 ORTHO05D008016 1.3e-20 103.2 78 70.5
Duzib151G0889 Durio zibethinus HOM05D006266 ORTHO05D008016 1.3e-20 103.2 78 70.5
HanXRQChr01g0023481 Helianthus annuus HOM05D006266 ORTHO05D008016 1.3e-20 103.2 80 65.0
Sed0000993 Sechium edule HOM05D006266 ORTHO05D008016 1.3e-20 103.2 78 67.9
GSVIVG01010835001 Vitis vinifera HOM05D006266 ORTHO05D008016 1.8e-20 102.8 78 67.9
Nn7g37595 Nelumbo nucifera HOM05D006266 ORTHO05D008016 3.0e-20 102.1 78 69.2
Oeu024477.1 Olea europaea HOM05D006266 ORTHO05D008016 3.0e-20 102.1 80 70.0
CANSAT78G1968 Cannabis sativa HOM05D006266 ORTHO05D008016 3.9e-20 101.7 78 69.2
Hund12414 Selenicereus undatus HOM05D006266 ORTHO05D008016 5.1e-20 101.3 78 64.1
MELO3C006793.2 Cucumis melo HOM05D006266 ORTHO05D008016 8.7e-20 100.5 78 65.4
CsaV3_3G015950 Cucumis sativus L. HOM05D006266 ORTHO05D008016 8.7e-20 100.5 78 65.4
Phvul.005G153800 Phaseolus vulgaris HOM05D006266 ORTHO05D008016 8.7e-20 100.5 78 67.9
arahy.Tifrunner.gnm1.ann1.D6UD48 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.1e-19 100.1 78 69.2
CiPaw.02G052400 Carya illinoinensis HOM05D006266 ORTHO05D008016 1.1e-19 100.1 78 66.7
Potri.017G027500 Populus trichocarpa HOM05D006266 ORTHO05D008016 1.5e-19 99.8 78 66.7
Sabra17G0016500 Salix brachista HOM05D006266 ORTHO05D008016 1.5e-19 99.8 78 66.7
arahy.Tifrunner.gnm1.ann1.JU07H9 Arachis hypogaea HOM05D006266 ORTHO05D008016 1.9e-19 99.4 78 67.9
Carub.0004s2587 Capsella rubella HOM05D006266 ORTHO05D008016 1.9e-19 99.4 78 62.8
Lsat_1_v5_gn_1_77821 Lactuca sativa HOM05D006266 ORTHO05D008016 1.9e-19 99.4 80 63.8
Prupe.1G197500 Prunus persica HOM05D006266 ORTHO05D008016 1.9e-19 99.4 78 64.1
Rhsim09G0023000 Rhododendron simsii HOM05D006266 ORTHO05D008016 1.9e-19 99.4 114 54.4
Atru.chr4.1256 Acer truncatum HOM05D006266 ORTHO05D008016 2.5e-19 99.0 78 66.7
Sc19g0002870 Simmondsia chinensis HOM05D006266 ORTHO05D008016 2.5e-19 99.0 78 67.9
Solyc12g021170.2 Solanum lycopersicum HOM05D006266 ORTHO05D008016 2.5e-19 99.0 79 63.3
Sopen12g011050 Solanum pennellii HOM05D006266 ORTHO05D008016 2.5e-19 99.0 79 63.3
AL4G42140 Arabidopsis lyrata HOM05D006266 ORTHO05D008016 3.3e-19 98.6 78 62.8
Thhalv10001353m.g Eutrema salsugineum HOM05D006266 ORTHO05D008016 3.3e-19 98.6 78 62.8
Sp4g25480 Schrenkiella parvula HOM05D006266 ORTHO05D008016 3.3e-19 98.6 78 62.8
HPP92_022167 Vanilla planifolia HOM05D006266 ORTHO05D008016 3.3e-19 98.6 78 64.1
AagrBONN_evm.TU.Sc2ySwM_117.3933 Anthoceros agrestis HOM05D006266 ORTHO05D008016 4.3e-19 98.2 79 63.3
Glyma.15G029200 Glycine max HOM05D006266 ORTHO05D008016 4.3e-19 98.2 78 65.4
ClCG05G007190 Citrullus lanatus HOM05D006266 ORTHO05D008016 5.7e-19 97.8 78 62.8
FvH4_4g10960 Fragaria vesca HOM05D006266 ORTHO05D008016 5.7e-19 97.8 78 64.1
Lalb_Chr14g0372511 Lupinus albus HOM05D006266 ORTHO05D008016 5.7e-19 97.8 78 65.4
VMungo1080G0961 Vigna mungo HOM05D006266 ORTHO05D008016 5.7e-19 97.8 78 66.7
AUR62023848 Chenopodium quinoa HOM05D006266 ORTHO05D008016 7.4e-19 97.4 80 68.8
SEGI_14637 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 7.4e-19 97.4 79 67.1
TPR.G18865 Trifolium pratense HOM05D006266 ORTHO05D008016 7.4e-19 97.4 78 65.4
AT2G43400 Arabidopsis thaliana HOM05D006266 ORTHO05D008016 9.7e-19 97.1 78 61.5
Eucgr.H00345 Eucalyptus grandis HOM05D006266 ORTHO05D008016 1.3e-18 96.7 78 62.8
BcaC02g12401 Brassica carinata HOM05D006266 ORTHO05D008016 1.6e-18 96.3 78 61.5
A05p03740 Brassica napus HOM05D006266 ORTHO05D008016 1.6e-18 96.3 78 61.5
BraA05t19361Z Brassica rapa HOM05D006266 ORTHO05D008016 1.6e-18 96.3 78 61.5
AUR62002342 Chenopodium quinoa HOM05D006266 ORTHO05D008016 1.6e-18 96.3 80 67.5
Manes.11G123500 Manihot esculenta HOM05D006266 ORTHO05D008016 1.6e-18 96.3 78 66.7
Medtr2g099040 Medicago truncatula HOM05D006266 ORTHO05D008016 1.6e-18 96.3 78 65.4
Psat5g289640 Pisum sativum HOM05D006266 ORTHO05D008016 2.2e-18 95.9 78 64.1
SEGI_11902 Sequoiadendron giganteum HOM05D006266 ORTHO05D008016 2.2e-18 95.9 78 66.7
SMO141G0282 Selaginella moellendorffii HOM05D006266 ORTHO05D008016 2.8e-18 95.5 77 61.0
MSTRG.4284 Avicennia marina HOM05D006266 ORTHO05D008016 3.7e-18 95.1 70 68.6
Ca_01251_v3 Cicer arietinum L. HOM05D006266 ORTHO05D008016 3.7e-18 95.1 78 64.1
THA.LOC104805138 Tarenaya hassleriana HOM05D006266 ORTHO05D008016 3.7e-18 95.1 78 60.3
Mapoly0012s0124 Marchantia polymorpha HOM05D006266 ORTHO05D008016 4.8e-18 94.7 74 64.9
Aa31LG1G25150 Aethionema arabicum HOM05D006266 ORTHO05D008016 6.3e-18 94.4 78 59.0
CDE09G1029 Ceratophyllum demersum HOM05D006266 ORTHO05D008016 6.3e-18 94.4 77 61.0
Lj3g0007796 Lotus japonicus HOM05D006266 ORTHO05D008016 6.3e-18 94.4 78 64.1
ATR0743G015 Amborella trichopoda HOM05D006266 ORTHO05D008016 8.2e-18 94.0 78 59.0
CARHR138470 Cardamine hirsuta HOM05D006266 ORTHO05D008016 8.2e-18 94.0 78 60.3
C04p04440 Brassica napus HOM05D006266 ORTHO05D008016 1.8e-17 92.8 78 59.0
BolC4t22077H Brassica oleracea HOM05D006266 ORTHO05D008016 1.8e-17 92.8 78 59.0
Nitab4.5_0000505g0020 Nicotiana tabacum HOM05D006266 ORTHO05D008016 2.0e-16 89.4 85 55.3
Cpa.g.sc9.312 Carica papaya HOM05D006266 ORTHO05D008016 2.6e-16 89.0 78 64.1
PGR142G3304 Punica granatum HOM05D006266 ORTHO05D008016 7.7e-16 87.4 103 48.5
Zm00001eb043590 Zea mays HOM05D006266 ORTHO05D008016 1.0e-15 87.0 75 62.7
Nitab4.5_0001990g0030 Nicotiana tabacum HOM05D006266 ORTHO05D008016 1.3e-15 86.7 79 57.0
unitig_52.g17681 Utricularia gibba HOM05D006266 ORTHO05D008016 1.3e-15 86.7 53 79.2
Cfa015189 Carpinus fangiana HOM05D006266 ORTHO05D008016 1.7e-15 86.3 78 60.3
Cre02.g094300 Chlamydomonas reinhardtii HOM05D006266 ORTHO05D008016 2.9e-15 85.5 82 56.1
MBI07_g02893_MAGBIO Magnolia biondii HOM05D006266 ORTHO05D008016 3.8e-15 85.1 78 60.3
DCAR_028531 Daucus carota HOM05D006266 ORTHO05D008016 2.5e-14 82.4 53 77.4
Peaxi162Scf00184g00418 Petunia axillaris HOM05D006266 ORTHO05D008016 2.5e-14 82.4 79 54.4
Ah.07g202330 Amaranthus hybridus HOM05D006266 ORTHO05D008016 3.2e-14 82.0 78 57.7
QL10p050722 Quercus lobata HOM05D006266 ORTHO05D008016 5.5e-14 81.3 102 50.0
SGA_v2.0_scaffold17G08154 Striga asiatica HOM05D006266 ORTHO05D008016 1.2e-13 80.1 134 41.8
PRCOL_00003135 Prasinoderma coloniale HOM05D006266 ORTHO05D008016 1.4e-12 76.6 80 48.8
RcHm_v2.0_Chr4g0406421 Rosa chinensis HOM05D006266 ORTHO05D008016 1.4e-12 76.6 123 40.7
MD04G1042900 Malus domestica HOM05D006266 ORTHO05D008016 9.7e-11 70.5 66 57.6
CAN.G51.9 Capsicum annuum HOM05D006266 ORTHO05D008016 2.8e-10 68.9 85 47.1
Cfa026422 Carpinus fangiana HOM05D006266 ORTHO05D008016 3.7e-10 68.6 76 47.4
FAN17G0658 Fragaria x ananassa HOM05D006266 ORTHO05D008016 6.3e-10 67.8 78 51.3
Haze_26951 Corylus avellana HOM05D006266 ORTHO05D008016 4.1e-09 65.1 78 42.3
CSS0008442 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 6.9e-09 64.3 49 73.5
CSS0022444 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 6.9e-09 64.3 49 73.5
Cc03_g11980 Coffea canephora HOM05D006266 ORTHO05D008016 6.9e-09 64.3 42 71.4
Haze_26227 Corylus avellana HOM05D006266 ORTHO05D008016 1.5e-08 63.2 77 39.0
CSS0019028 Camellia sinensis var. sinensis HOM05D006266 ORTHO05D024694 5.9e-08 61.2 50 72.0
Haze_01464 Corylus avellana HOM05D006266 ORTHO05D008016 1.7e-07 59.7 102 38.2
EL10Ac3g06005 Beta vulgaris HOM05D006266 ORTHO05D008016 1.1e-06 57.0 37 75.7
FAN12G3251 Fragaria x ananassa HOM05D006266 ORTHO05D008016 3.2e-06 55.5 37 67.6


User provided reference genes

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