Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016176 Camellia sinensis var. sinensis HOM05D000290 ORTHO05D006676 1.3e-48 196.1 100 100.0
Actinidia17170 Actinidia chinensis HOM05D000290 ORTHO05D006676 8.7e-24 113.6 91 67.0
TAR629G2667 Trochodendron aralioides HOM05D000290 ORTHO05D006676 2.3e-16 89.0 81 56.8
GSVIVG01035242001 Vitis vinifera HOM05D000290 ORTHO05D006676 6.7e-16 87.4 83 56.6
Rhsim10G0183800 Rhododendron simsii HOM05D000290 ORTHO05D006676 1.6e-14 82.8 87 52.9
Nn4g24663 Nelumbo nucifera HOM05D000290 ORTHO05D006676 8.1e-14 80.5 90 48.9
vmacro20482 Vaccinium macrocarpon HOM05D000290 ORTHO05D006676 8.1e-14 80.5 91 51.6
Haze_14294 Corylus avellana HOM05D000290 ORTHO05D006676 2.1e-09 65.9 87 51.7
CiPaw.04G048800 Carya illinoinensis HOM05D000290 ORTHO05D006676 2.7e-09 65.5 87 48.3
Aqoxy3G04138_Aqoxy3G04139 Aquilegia oxysepala HOM05D000290 ORTHO05D006676 4.6e-09 64.7 96 46.9
Lsat_1_v5_gn_8_112060 Lactuca sativa HOM05D000290 ORTHO05D006676 1.3e-08 63.2 80 53.8
Manes.01G122600 Manihot esculenta HOM05D000290 ORTHO05D006676 1.3e-08 63.2 87 49.4
DCAR_003414 Daucus carota HOM05D004515 ORTHO05D006676 1.8e-08 62.8 92 45.7
PSO063G2011 Papaver somniferum HOM05D000290 ORTHO05D006676 1.9e-07 59.3 101 44.6
Cfa007761 Carpinus fangiana HOM05D000290 ORTHO05D006676 7.4e-07 57.4 87 47.1
Atru.chr12.1226 Acer truncatum HOM05D000290 ORTHO05D006676 1.3e-06 56.6 87 44.8
Prupe.3G015600 Prunus persica HOM05D000290 ORTHO05D006676 1.3e-06 56.6 77 49.4
ClCG05G012110 Citrullus lanatus HOM05D000290 ORTHO05D006676 2.1e-06 55.8 91 41.8
TWI74G0971 Tripterygium wilfordii HOM05D000290 ORTHO05D006676 2.1e-06 55.8 84 44.0
Cpa.g.sc178.12 Carica papaya HOM05D004515 ORTHO05D006676 2.8e-06 55.5 83 41.0
CDE05G3543 Ceratophyllum demersum HOM05D000290 ORTHO05D006676 2.8e-06 55.5 87 43.7
RcHm_v2.0_Chr3g0490181 Rosa chinensis HOM05D000290 ORTHO05D006676 4.8e-06 54.7 80 45.0
THA.LOC104822112 Tarenaya hassleriana HOM05D000290 ORTHO05D006676 8.2e-06 53.9 84 46.4


User provided reference genes

Program Settings