Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016174 Camellia sinensis var. sinensis HOM05D004107 ORTHO05D004738 1.1e-198 696.4 342 100.0
CSS0040304 Camellia sinensis var. sinensis HOM05D004107 ORTHO05D004738 8.5e-180 633.6 341 90.9
CSS0041721 Camellia sinensis var. sinensis HOM05D004107 ORTHO05D004738 1.5e-179 632.9 341 90.9
Dinv13883 Davidia involucrata HOM05D004107 ORTHO05D004738 1.8e-161 572.8 347 80.4
Rhsim02G0109900 Rhododendron simsii HOM05D004107 ORTHO05D004738 6.4e-159 564.3 341 81.5
Rhsim02G0109300 Rhododendron simsii HOM05D004107 ORTHO05D004738 2.4e-158 562.4 341 81.2
vmacro10117 Vaccinium macrocarpon HOM05D004107 ORTHO05D004738 2.4e-158 562.4 341 80.4
CSS0046928 Camellia sinensis var. sinensis HOM05D004107 ORTHO05D004738 3.6e-154 548.5 308 87.0
Hma1.2p1_0558F.1_g178480 Hydrangea macrophylla HOM05D004107 ORTHO05D004738 1.2e-152 543.5 349 77.7
TAR629G1093 Trochodendron aralioides HOM05D004107 ORTHO05D004738 2.6e-144 515.8 343 74.9
DCAR_008142 Daucus carota HOM05D004107 ORTHO05D004738 2.9e-143 512.3 341 73.6
Duzib192G0236 Durio zibethinus HOM05D004107 ORTHO05D004738 1.7e-140 503.1 343 73.8
Thecc.06G219000 Theobroma cacao HOM05D004107 ORTHO05D004738 3.9e-140 501.9 343 73.2
MD05G1344000 Malus domestica HOM05D004107 ORTHO05D004738 5.1e-140 501.5 344 73.8
MSTRG.15982 Avicennia marina HOM05D004107 ORTHO05D004738 8.6e-140 500.7 344 73.5
Solyc03g031700.4 Solanum lycopersicum HOM05D004107 ORTHO05D004738 8.6e-140 500.7 342 71.9
Sopen03g005570 Solanum pennellii HOM05D004107 ORTHO05D004738 8.6e-140 500.7 342 71.9
Cpa.g.sc198.44 Carica papaya HOM05D004107 ORTHO05D004738 4.7e-138 495.0 350 72.3
Gohir.D05G172700 Gossypium hirsutum HOM05D004107 ORTHO05D004738 4.7e-138 495.0 344 71.8
Atru.chr10.2206 Acer truncatum HOM05D004107 ORTHO05D004738 8.1e-138 494.2 345 72.5
Gohir.A05G169500 Gossypium hirsutum HOM05D004107 ORTHO05D004738 8.1e-138 494.2 344 71.8
Gorai.009G177900 Gossypium raimondii HOM05D004107 ORTHO05D004738 1.1e-137 493.8 344 71.8
Lj1A1229G40 Lonicera japonica HOM05D004107 ORTHO05D004738 1.8e-137 493.0 341 72.4
Oeu033892.1 Olea europaea HOM05D004107 ORTHO05D004738 1.8e-137 493.0 342 71.9
PGSC0003DMG400005080 Solanum tuberosum HOM05D004107 ORTHO05D004738 2.4e-137 492.7 342 70.2
Cc01_g06630 Coffea canephora HOM05D004107 ORTHO05D004738 1.5e-136 490.0 344 70.6
Ciclev10014785m.g Citrus clementina HOM05D004107 ORTHO05D004738 2.0e-136 489.6 348 71.8
Prupe.4G022500 Prunus persica HOM05D004107 ORTHO05D004738 2.0e-136 489.6 346 72.8
HanXRQChr01g0004241 Helianthus annuus HOM05D004107 ORTHO05D004738 2.6e-136 489.2 345 72.2
Nitab4.5_0006137g0030 Nicotiana tabacum HOM05D004107 ORTHO05D004738 2.6e-136 489.2 342 71.6
Cfa007474 Carpinus fangiana HOM05D004107 ORTHO05D004738 4.4e-136 488.4 349 70.8
Thecc.06G087700 Theobroma cacao HOM05D004107 ORTHO05D004738 4.4e-136 488.4 343 71.7
ECA248G0760 Erigeron canadensis HOM05D004107 ORTHO05D004738 5.8e-136 488.0 342 70.5
Haze_14623 Corylus avellana HOM05D004107 ORTHO05D004738 7.6e-136 487.6 349 71.1
Manes.16G008200 Manihot esculenta HOM05D004107 ORTHO05D004738 1.3e-135 486.9 347 71.2
QL02p078433 Quercus lobata HOM05D004107 ORTHO05D004738 1.3e-135 486.9 354 70.3
SalBow8G0975 Salvia bowleyana HOM05D004107 ORTHO05D004738 1.7e-135 486.5 343 70.8
Nitab4.5_0003254g0100 Nicotiana tabacum HOM05D004107 ORTHO05D004738 2.2e-135 486.1 342 71.3
CAN.G569.15 Capsicum annuum HOM05D004107 ORTHO05D004738 2.9e-135 485.7 344 71.2
MSTRG.7222 Avicennia marina HOM05D004107 ORTHO05D004738 6.4e-135 484.6 342 71.1
CANSAT56G3413 Cannabis sativa HOM05D004107 ORTHO05D004738 6.4e-135 484.6 348 69.3
Lsat_1_v5_gn_1_128700 Lactuca sativa HOM05D004107 ORTHO05D004738 1.1e-134 483.8 347 70.3
TWI63G0549 Tripterygium wilfordii HOM05D004107 ORTHO05D004738 2.4e-134 482.6 348 71.0
Peaxi162Scf00853g00314 Petunia axillaris HOM05D004107 ORTHO05D004738 7.1e-134 481.1 342 70.8
EL10Ac3g05771 Beta vulgaris HOM05D004107 ORTHO05D004738 9.2e-134 480.7 352 69.3
MELO3C002463.2 Cucumis melo HOM05D004107 ORTHO05D004738 1.2e-133 480.3 347 70.9
Aqoxy1G02185 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 1.6e-133 479.9 346 70.2
ClCG03G004800 Citrullus lanatus HOM05D004107 ORTHO05D004738 4.6e-133 478.4 347 70.6
CsaV3_1G010840 Cucumis sativus L. HOM05D004107 ORTHO05D004738 6.0e-133 478.0 347 70.6
Potri.004G016900 Populus trichocarpa HOM05D004107 ORTHO05D004738 6.0e-133 478.0 353 68.6
Sopen02g025130 Solanum pennellii HOM05D004107 ORTHO05D004738 6.0e-133 478.0 343 69.7
PGSC0003DMG400016484 Solanum tuberosum HOM05D004107 ORTHO05D004738 7.8e-133 477.6 343 69.7
Solyc02g080440.3 Solanum lycopersicum HOM05D004107 ORTHO05D004738 1.3e-132 476.9 343 69.7
Nitab4.5_0009691g0010 Nicotiana tabacum HOM05D004107 ORTHO05D004738 1.7e-132 476.5 343 69.7
TWI38G1857 Tripterygium wilfordii HOM05D004107 ORTHO05D004738 2.3e-132 476.1 350 70.6
Sed0003265 Sechium edule HOM05D004107 ORTHO05D004738 3.0e-132 475.7 349 70.5
Sabra04G0009200 Salix brachista HOM05D004107 ORTHO05D004738 5.1e-132 474.9 350 69.4
Peaxi162Scf00079g01510 Petunia axillaris HOM05D004107 ORTHO05D004738 8.6e-132 474.2 341 69.5
Nitab4.5_0003343g0020 Nicotiana tabacum HOM05D004107 ORTHO05D004738 1.5e-131 473.4 342 69.3
Sp6g04170 Schrenkiella parvula HOM05D004107 ORTHO05D004738 1.9e-131 473.0 353 67.7
Migut.M01308 Erythranthe guttata HOM05D004107 ORTHO05D004738 2.5e-131 472.6 343 68.8
Thhalv10028516m.g Eutrema salsugineum HOM05D004107 ORTHO05D004738 2.5e-131 472.6 356 67.1
Hund21401 Selenicereus undatus HOM05D004107 ORTHO05D004738 3.3e-131 472.2 349 69.1
CARHR252770 Cardamine hirsuta HOM05D004107 ORTHO05D004738 1.2e-130 470.3 346 68.2
AUR62021968 Chenopodium quinoa HOM05D004107 ORTHO05D004738 2.1e-130 469.5 355 69.0
AUR62012688 Chenopodium quinoa HOM05D004107 ORTHO05D004738 6.2e-130 468.0 355 68.5
Ah.07g208390 Amaranthus hybridus HOM05D004107 ORTHO05D004738 1.1e-129 467.2 352 69.0
CiPaw.04G022400 Carya illinoinensis HOM05D004107 ORTHO05D004738 1.1e-129 467.2 360 67.5
Aa31LG9G9700 Aethionema arabicum HOM05D004107 ORTHO05D004738 4.0e-129 465.3 348 67.8
THA.LOC104813092 Tarenaya hassleriana HOM05D004107 ORTHO05D004738 4.0e-129 465.3 353 67.4
arahy.Tifrunner.gnm1.ann1.G9MXMR Arachis hypogaea HOM05D004107 ORTHO05D004738 9.0e-129 464.2 347 69.2
CiPaw.03G033800 Carya illinoinensis HOM05D004107 ORTHO05D004738 1.2e-128 463.8 356 66.9
Sed0011656 Sechium edule HOM05D004107 ORTHO05D004738 4.4e-128 461.8 355 69.0
arahy.Tifrunner.gnm1.ann1.1W8BNJ Arachis hypogaea HOM05D004107 ORTHO05D004738 1.7e-127 459.9 347 68.6
BcaB01g01836 Brassica carinata HOM05D004107 ORTHO05D004738 6.4e-127 458.0 346 67.1
PSO541G4368 Papaver somniferum HOM05D004107 ORTHO05D004738 8.4e-127 457.6 344 66.9
PSO675G6282 Papaver somniferum HOM05D004107 ORTHO05D004738 1.4e-126 456.8 344 66.6
RcHm_v2.0_Chr5g0003451 Rosa chinensis HOM05D004107 ORTHO05D004738 2.4e-126 456.1 345 68.1
Oeu002728.1 Olea europaea HOM05D004107 ORTHO05D004738 4.2e-126 455.3 343 68.2
A09p26110 Brassica napus HOM05D004107 ORTHO05D004738 9.3e-126 454.1 348 67.0
TPR.G39070 Trifolium pratense HOM05D004107 ORTHO05D004738 1.6e-125 453.4 345 67.5
Psat3g165680 Pisum sativum HOM05D004107 ORTHO05D004738 2.1e-125 453.0 344 68.0
Carub.0006s3269 Capsella rubella HOM05D004107 ORTHO05D004738 2.7e-125 452.6 346 65.6
Lalb_Chr11g0064371 Lupinus albus HOM05D004107 ORTHO05D004738 2.7e-125 452.6 344 66.9
AT4G04770 Arabidopsis thaliana HOM05D004107 ORTHO05D004738 4.6e-125 451.8 347 65.7
BraA09t38178Z Brassica rapa HOM05D004107 ORTHO05D004738 4.6e-125 451.8 348 67.0
AL6G48260 Arabidopsis lyrata HOM05D004107 ORTHO05D004738 1.3e-124 450.3 348 66.1
BcaC04g21323 Brassica carinata HOM05D004107 ORTHO05D004738 1.7e-124 449.9 346 67.1
C09p33150 Brassica napus HOM05D004107 ORTHO05D004738 1.7e-124 449.9 346 67.1
PGR042G1667 Punica granatum HOM05D004107 ORTHO05D004738 1.7e-124 449.9 356 65.4
FvH4_3g02300 Fragaria vesca HOM05D004107 ORTHO05D004738 3.9e-124 448.7 347 66.0
FAN21G0289 Fragaria x ananassa HOM05D004107 ORTHO05D004738 3.9e-124 448.7 344 67.2
Medtr7g030030 Medicago truncatula HOM05D004107 ORTHO05D004738 5.6e-123 444.9 345 65.5
Medtr7g038720 Medicago truncatula HOM05D004107 ORTHO05D004738 5.6e-123 444.9 345 65.5
GSVIVG01012742001 Vitis vinifera HOM05D004107 ORTHO05D004738 9.6e-123 444.1 344 67.4
CDE07G0300 Ceratophyllum demersum HOM05D004107 ORTHO05D004738 3.6e-122 442.2 341 63.9
Ca_09479_v3 Cicer arietinum L. HOM05D004107 ORTHO05D004738 8.1e-122 441.0 347 66.0
Lalb_Chr23g0269471 Lupinus albus HOM05D004107 ORTHO05D004738 8.1e-122 441.0 345 67.0
CDE06G1524 Ceratophyllum demersum HOM05D004107 ORTHO05D004738 2.4e-121 439.5 341 63.3
PSO339G3293 Papaver somniferum HOM05D004107 ORTHO05D004738 1.5e-120 436.8 344 64.2
BolC9t56149H Brassica oleracea HOM05D004107 ORTHO05D004738 3.4e-120 435.6 346 65.6
HanXRQChr11g0323581 Helianthus annuus HOM05D004107 ORTHO05D004738 3.4e-120 435.6 348 63.8
Lj5g0005763 Lotus japonicus HOM05D004107 ORTHO05D004738 1.3e-119 433.7 344 65.7
FAN25G2291 Fragaria x ananassa HOM05D004107 ORTHO05D004738 1.7e-119 433.3 344 65.7
MD10G1319900 Malus domestica HOM05D004107 ORTHO05D004738 1.1e-118 430.6 312 70.8
TAR627G0615 Trochodendron aralioides HOM05D004107 ORTHO05D004738 1.1e-118 430.6 343 66.2
MBI02_g22110_MAGBIO Magnolia biondii HOM05D004107 ORTHO05D004738 1.4e-118 430.3 342 65.2
Glyma.13G163700 Glycine max HOM05D004107 ORTHO05D004738 1.2e-117 427.2 347 66.9
Phvul.003G172700 Phaseolus vulgaris HOM05D004107 ORTHO05D004738 1.6e-117 426.8 344 66.0
Medtr8g019500 Medicago truncatula HOM05D004107 ORTHO05D004738 7.9e-117 424.5 348 64.1
Sc05g0009110 Simmondsia chinensis HOM05D004107 ORTHO05D004738 1.3e-116 423.7 342 62.0
ATR0772G029 Amborella trichopoda HOM05D004107 ORTHO05D004738 5.1e-116 421.8 349 62.2
Glyma.17G107200 Glycine max HOM05D004107 ORTHO05D004738 8.7e-116 421.0 277 74.7
unitig_748.g7576 Utricularia gibba HOM05D004107 ORTHO05D004738 2.5e-115 419.5 310 66.5
Psat0s2739g0120 Pisum sativum HOM05D004107 ORTHO05D004738 6.9e-113 411.4 342 61.7
VMungo1215G1998 Vigna mungo HOM05D004107 ORTHO05D004738 1.2e-112 410.6 295 71.2
Mapoly0043s0049 Marchantia polymorpha HOM05D004107 ORTHO05D004738 5.8e-112 408.3 277 68.6
HPP92_023742 Vanilla planifolia HOM05D004107 ORTHO05D004738 1.4e-110 403.7 289 65.1
CARHR107510 Cardamine hirsuta HOM05D004107 ORTHO05D004738 1.2e-109 400.6 345 60.3
Pp3c2_37190 Physcomitrium patens HOM05D004107 ORTHO05D004738 1.6e-109 400.2 269 69.5
SEGI_39818 Sequoiadendron giganteum HOM05D004107 ORTHO05D004738 3.5e-109 399.1 270 69.3
Pp3c1_9330 Physcomitrium patens HOM05D004107 ORTHO05D004738 1.3e-108 397.1 276 68.1
SMO118G0281 Selaginella moellendorffii HOM05D004107 ORTHO05D004738 3.9e-108 395.6 311 61.7
Actinidia11849 Actinidia chinensis HOM05D004107 ORTHO05D004738 5.1e-108 395.2 221 86.4
vmacro15813 Vaccinium macrocarpon HOM05D004107 ORTHO05D004738 3.7e-106 389.0 221 83.7
CBR_g37549 Chara braunii HOM05D004107 ORTHO05D004738 8.2e-106 387.9 268 67.9
Eucgr.E04076 Eucalyptus grandis HOM05D004107 ORTHO05D004738 3.4e-104 382.5 221 82.4
AT5G44316 Arabidopsis thaliana HOM05D004107 ORTHO05D004738 7.6e-104 381.3 352 56.8
Os01g0830000 Oryza sativa ssp. japonica HOM05D004107 ORTHO05D004738 6.5e-103 378.3 277 64.6
VMungo0251G0494 Vigna mungo HOM05D004107 ORTHO05D004738 2.5e-102 376.3 241 77.6
SHI00520 Sapria himalayana HOM05D004107 ORTHO05D004738 2.5e-99 366.3 259 68.3
Cre15.g643600 Chlamydomonas reinhardtii HOM05D004107 ORTHO05D004738 2.8e-98 362.8 271 63.5
Duzib211G0221 Durio zibethinus HOM05D004107 ORTHO05D004738 1.0e-95 354.4 332 58.1
PRCOL_00000395 Prasinoderma coloniale HOM05D004107 ORTHO05D004738 7.2e-94 348.2 268 61.6
EL10Ac8g18634 Beta vulgaris HOM05D004107 ORTHO05D004738 6.3e-90 335.1 264 59.5
Rhsim04G0103400 Rhododendron simsii HOM05D004107 ORTHO05D004738 3.2e-86 322.8 346 52.0
MCO07G339 Micromonas commoda HOM05D004107 ORTHO05D004738 1.1e-78 297.7 221 65.6
Haze_26807 Corylus avellana HOM05D004107 ORTHO05D004738 6.1e-77 292.0 291 51.5
SMO347G0487 Selaginella moellendorffii HOM05D004107 ORTHO05D004738 3.6e-69 266.2 261 49.8
Hund23481 Selenicereus undatus HOM05D004107 ORTHO05D004738 8.0e-69 265.0 211 66.4
Thhalv10022515m.g Eutrema salsugineum HOM05D004107 ORTHO05D004738 4.4e-67 259.2 271 51.3
Aqoxy1G02187 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 3.3e-46 189.9 135 68.1
Pp3c25_3020 Physcomitrium patens HOM05D004107 ORTHO05D004738 3.7e-42 176.4 243 42.0
vmacro09068 Vaccinium macrocarpon HOM05D004107 ORTHO05D004738 1.6e-37 161.0 206 45.6
Aqoxy226s001 Aquilegia oxysepala HOM05D004107 ORTHO05D004738 1.2e-21 108.2 85 58.8
AagrBONN_evm.TU.Sc2ySwM_344.3731 Anthoceros agrestis HOM05D004107 ORTHO05D004738 2.4e-20 104.0 68 76.5
BolC2t10037H Brassica oleracea HOM05D004107 ORTHO05D004738 7.6e-19 99.0 67 76.1
SGA_v2.0_scaffold24G10311 Striga asiatica HOM05D004107 ORTHO05D004738 2.2e-18 97.4 101 52.5
Pp3c4_7780 Physcomitrium patens HOM05D004107 ORTHO05D004738 4.9e-18 96.3 68 66.2
BraA02t07513Z Brassica rapa HOM05D004107 ORTHO05D004738 6.4e-18 95.9 67 71.6
C02p40090 Brassica napus HOM05D004107 ORTHO05D004738 1.4e-17 94.7 67 74.6
Nitab4.5_0000960g0170 Nicotiana tabacum HOM05D004107 ORTHO05D004738 3.9e-15 86.7 96 46.9
A02p25270 Brassica napus HOM05D004107 ORTHO05D004738 5.1e-15 86.3 62 69.4
VMungo1215G1910 Vigna mungo HOM05D000103 ORTHO05D000049 5.6e-14 82.8 143 42.7
COL.COLO4_31757 Corchorus olitorius HOM05D004107 ORTHO05D004738 1.8e-12 77.8 41 92.7
VMungo1383G0329 Vigna mungo HOM05D004107 ORTHO05D033630 2.2e-10 70.9 87 50.6
Nitab4.5_0001990g0020 Nicotiana tabacum HOM05D002374 ORTHO05D004738 4.6e-08 63.2 90 42.2


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