Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016170 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 2.1e-73 278.9 136 100.0
CSS0047434 Camellia sinensis var. sinensis HOM05D005997 ORTHO05D008323 6.2e-73 277.3 136 99.3
Actinidia00103 Actinidia chinensis HOM05D005997 ORTHO05D008323 7.6e-63 243.8 134 87.3
vmacro11568 Vaccinium macrocarpon HOM05D005997 ORTHO05D008323 5.2e-56 221.1 134 80.6
Rhsim06G0225700 Rhododendron simsii HOM05D005997 ORTHO05D008323 3.4e-55 218.4 134 78.4
Dinv40826 Davidia involucrata HOM05D005997 ORTHO05D008323 7.6e-55 217.2 135 80.0
Gohir.D01G072400 Gossypium hirsutum HOM05D005997 ORTHO05D008323 2.2e-54 215.7 133 76.7
Eucgr.F03518 Eucalyptus grandis HOM05D005997 ORTHO05D008323 4.9e-54 214.5 115 87.8
Gorai.002G095400 Gossypium raimondii HOM05D005997 ORTHO05D008323 1.1e-53 213.4 133 76.7
COL.COLO4_09766 Corchorus olitorius HOM05D005997 ORTHO05D008323 1.4e-53 213.0 135 76.3
Haze_09774 Corylus avellana HOM05D005997 ORTHO05D008323 1.4e-53 213.0 130 80.0
Hma1.2p1_0036F.1_g022850 Hydrangea macrophylla HOM05D005997 ORTHO05D008323 1.9e-53 212.6 133 75.2
QL08p008622 Quercus lobata HOM05D005997 ORTHO05D008323 3.2e-53 211.8 134 77.6
Thecc.07G024000 Theobroma cacao HOM05D005997 ORTHO05D008323 3.2e-53 211.8 133 76.7
Ciclev10009024m.g Citrus clementina HOM05D005997 ORTHO05D008323 9.3e-53 210.3 135 76.3
Gohir.A01G086200 Gossypium hirsutum HOM05D005997 ORTHO05D008323 1.6e-52 209.5 115 85.2
Prupe.4G230500 Prunus persica HOM05D005997 ORTHO05D008323 1.6e-52 209.5 132 78.0
RcHm_v2.0_Chr5g0042111 Rosa chinensis HOM05D005997 ORTHO05D008323 7.8e-52 207.2 114 85.1
TWI38G0893 Tripterygium wilfordii HOM05D005997 ORTHO05D008323 7.8e-52 207.2 135 73.3
Duzib213G0008 Durio zibethinus HOM05D005997 ORTHO05D008323 1.3e-51 206.5 115 82.6
Lj6g0009736 Lotus japonicus HOM05D005997 ORTHO05D008323 1.7e-51 206.1 135 76.3
RcHm_v2.0_Chr5g0042181 Rosa chinensis HOM05D005997 ORTHO05D008323 1.7e-51 206.1 114 84.2
FAN21G1688 Fragaria x ananassa HOM05D005997 ORTHO05D008323 2.3e-51 205.7 128 77.3
Nitab4.5_0010102g0010 Nicotiana tabacum HOM05D005997 ORTHO05D008323 2.3e-51 205.7 132 75.0
Nitab4.5_0001160g0200 Nicotiana tabacum HOM05D005997 ORTHO05D008323 3.9e-51 204.9 132 75.0
TAR624G0829 Trochodendron aralioides HOM05D005997 ORTHO05D008323 3.9e-51 204.9 131 76.3
FvH4_3g23860 Fragaria vesca HOM05D005997 ORTHO05D008323 5.1e-51 204.5 128 77.3
Lj1C884G3 Lonicera japonica HOM05D005997 ORTHO05D008323 6.6e-51 204.1 136 76.5
Potri.008G180300 Populus trichocarpa HOM05D005997 ORTHO05D008323 6.6e-51 204.1 123 76.4
Atru.BG.132.p Acer truncatum HOM05D005997 ORTHO05D008323 8.7e-51 203.8 115 81.7
Glyma.08G325100 Glycine max HOM05D005997 ORTHO05D008323 8.7e-51 203.8 131 76.3
FAN25G0611 Fragaria x ananassa HOM05D005997 ORTHO05D008323 1.1e-50 203.4 124 77.4
GSVIVG01037764001 Vitis vinifera HOM05D005997 ORTHO05D008323 1.1e-50 203.4 113 86.7
MD11G1206400 Malus domestica HOM05D005997 ORTHO05D008323 1.5e-50 203.0 124 79.0
Aqoxy1G04030 Aquilegia oxysepala HOM05D005997 ORTHO05D008323 1.9e-50 202.6 120 80.0
PGSC0003DMG400022292 Solanum tuberosum HOM05D005997 ORTHO05D008323 1.9e-50 202.6 133 72.2
CAN.G337.36 Capsicum annuum HOM05D005997 ORTHO05D008323 2.5e-50 202.2 114 84.2
CsaV3_7G018710 Cucumis sativus L. HOM05D005997 ORTHO05D008323 2.5e-50 202.2 128 76.6
CiPaw.12G135200 Carya illinoinensis HOM05D005997 ORTHO05D008323 3.3e-50 201.8 115 83.5
Solyc07g065180.3 Solanum lycopersicum HOM05D005997 ORTHO05D008323 3.3e-50 201.8 129 74.4
VMungo0540G2314 Vigna mungo HOM05D005997 ORTHO05D008323 3.3e-50 201.8 128 75.8
PGR044G2356 Punica granatum HOM05D005997 ORTHO05D008323 4.3e-50 201.4 115 82.6
Sopen07g033400 Solanum pennellii HOM05D005997 ORTHO05D008323 4.3e-50 201.4 129 74.4
TPR.G1907 Trifolium pratense HOM05D005997 ORTHO05D008323 4.3e-50 201.4 131 74.8
Cpa.g.sc12.206 Carica papaya HOM05D005997 ORTHO05D008323 5.6e-50 201.1 115 78.3
Phvul.006G051400 Phaseolus vulgaris HOM05D005997 ORTHO05D008323 5.6e-50 201.1 114 82.5
Sabra08G0137600 Salix brachista HOM05D005997 ORTHO05D008323 7.3e-50 200.7 122 77.9
Psat5g172000 Pisum sativum HOM05D005997 ORTHO05D008323 9.6e-50 200.3 136 71.3
AUR62015935 Chenopodium quinoa HOM05D005997 ORTHO05D008323 1.6e-49 199.5 115 79.1
Ca_20142_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 2.1e-49 199.1 123 75.6
Ca_20145_v3 Cicer arietinum L. HOM05D005997 ORTHO05D008323 2.1e-49 199.1 123 75.6
Oeu019619.1 Olea europaea HOM05D005997 ORTHO05D008323 2.1e-49 199.1 133 73.7
Zm00001eb049320 Zea mays HOM05D005997 ORTHO05D008323 2.8e-49 198.7 118 79.7
Thhalv10011693m.g Eutrema salsugineum HOM05D005997 ORTHO05D008323 3.6e-49 198.4 125 73.6
Sed0012266 Sechium edule HOM05D005997 ORTHO05D008323 3.6e-49 198.4 128 75.8
arahy.Tifrunner.gnm1.ann1.N1CS9Q Arachis hypogaea HOM05D005997 ORTHO05D008323 4.8e-49 198.0 132 73.5
CANSAT11G0206 Cannabis sativa HOM05D005997 ORTHO05D008323 4.8e-49 198.0 133 72.9
ClCG09G021010 Citrullus lanatus HOM05D005997 ORTHO05D008323 4.8e-49 198.0 128 75.0
MBI16_g42314_MAGBIO Magnolia biondii HOM05D005997 ORTHO05D008323 4.8e-49 198.0 125 72.8
ECA236G3940 Erigeron canadensis HOM05D004336 ORTHO05D005367 6.2e-49 197.6 114 80.7
MSTRG.6975 Avicennia marina HOM05D005997 ORTHO05D008323 8.1e-49 197.2 114 81.6
Psat5g171680 Pisum sativum HOM05D005997 ORTHO05D008323 1.1e-48 196.8 136 70.6
arahy.Tifrunner.gnm1.ann1.JACZ02 Arachis hypogaea HOM05D005997 ORTHO05D008323 1.4e-48 196.4 112 82.1
EL10Ac4g07628 Beta vulgaris HOM05D005997 ORTHO05D008323 1.4e-48 196.4 115 80.0
Lalb_Chr06g0174051 Lupinus albus HOM05D005997 ORTHO05D008323 1.8e-48 196.1 110 81.8
AL1G58220 Arabidopsis lyrata HOM05D005997 ORTHO05D008323 2.4e-48 195.7 128 71.1
AT1G50575 Arabidopsis thaliana HOM05D005997 ORTHO05D008323 3.1e-48 195.3 124 71.8
Medtr3g055920 Medicago truncatula HOM05D005997 ORTHO05D008323 6.9e-48 194.1 131 72.5
Os03g0587100 Oryza sativa ssp. japonica HOM05D005997 ORTHO05D008323 6.9e-48 194.1 115 76.5
Sp1g37390 Schrenkiella parvula HOM05D005997 ORTHO05D008323 6.9e-48 194.1 113 77.9
BraA06t23516Z Brassica rapa HOM05D005997 ORTHO05D008323 1.2e-47 193.4 124 73.4
Cfa020073 Carpinus fangiana HOM05D005997 ORTHO05D008323 1.2e-47 193.4 123 77.2
Carub.0001s3961 Capsella rubella HOM05D005997 ORTHO05D008323 1.5e-47 193.0 128 71.1
Cc05_g14560 Coffea canephora HOM05D005997 ORTHO05D008323 1.5e-47 193.0 114 78.9
Manes.03G134100 Manihot esculenta HOM05D005997 ORTHO05D008323 1.5e-47 193.0 114 77.2
AUR62040674 Chenopodium quinoa HOM05D005997 ORTHO05D008323 2.0e-47 192.6 114 78.1
DCAR_022603 Daucus carota HOM05D005997 ORTHO05D008323 3.4e-47 191.8 119 73.9
Nn1g03269 Nelumbo nucifera HOM05D005997 ORTHO05D008323 3.4e-47 191.8 116 77.6
Migut.M01687 Erythranthe guttata HOM05D005997 ORTHO05D008323 5.8e-47 191.0 119 75.6
SalBow8G0955 Salvia bowleyana HOM05D005997 ORTHO05D008323 5.8e-47 191.0 134 70.9
BcaC08g43226 Brassica carinata HOM05D005997 ORTHO05D008323 1.7e-46 189.5 124 71.0
C06p05740 Brassica napus HOM05D005997 ORTHO05D008323 1.7e-46 189.5 124 71.0
BolC6t35684H Brassica oleracea HOM05D005997 ORTHO05D008323 1.7e-46 189.5 124 71.0
CARHR040570 Cardamine hirsuta HOM05D005997 ORTHO05D008323 2.9e-46 188.7 113 76.1
PSO302G0218 Papaver somniferum HOM05D005997 ORTHO05D008323 2.9e-46 188.7 115 75.7
Peaxi162Scf00047g00845 Petunia axillaris HOM05D005997 ORTHO05D008323 2.9e-46 188.7 130 71.5
Aa31LG10G3760 Aethionema arabicum HOM05D005997 ORTHO05D008323 3.8e-46 188.3 112 76.8
ATR0712G169 Amborella trichopoda HOM05D005997 ORTHO05D008323 4.9e-46 188.0 127 67.7
A06p03040 Brassica napus HOM05D005997 ORTHO05D008323 4.9e-46 188.0 124 71.0
THA.LOC104826490 Tarenaya hassleriana HOM05D005997 ORTHO05D008323 4.9e-46 188.0 112 75.9
PSO210G1255 Papaver somniferum HOM05D005997 ORTHO05D008323 6.4e-46 187.6 115 73.9
BcaB07g33491 Brassica carinata HOM05D005997 ORTHO05D008323 1.9e-45 186.0 124 70.2
SGA_v2.0_scaffold168G38522 Striga asiatica HOM05D005997 ORTHO05D008323 7.1e-45 184.1 112 74.1
SEGI_04256 Sequoiadendron giganteum HOM05D005997 ORTHO05D008323 9.3e-45 183.7 131 64.1
Sc07g0002940 Simmondsia chinensis HOM05D005997 ORTHO05D008323 1.2e-44 183.3 114 75.4
PGR031G3624 Punica granatum HOM05D005997 ORTHO05D008323 1.6e-44 183.0 111 77.5
SMO196G0283 Selaginella moellendorffii HOM05D005997 ORTHO05D008323 3.7e-41 171.8 114 70.2
Atru.chr7.2351 Acer truncatum HOM05D005997 ORTHO05D008323 2.4e-40 169.1 102 75.5
Atru.chr7.2230 Acer truncatum HOM05D005997 ORTHO05D008323 3.1e-40 168.7 97 79.4
AagrBONN_evm.TU.Sc2ySwM_362.871 Anthoceros agrestis HOM05D005997 ORTHO05D008323 2.9e-38 162.2 112 67.0
Lsat_1_v5_gn_7_114661 Lactuca sativa HOM05D005997 ORTHO05D008323 3.2e-37 158.7 97 76.3
Pp3c14_23810 Physcomitrium patens HOM05D005997 ORTHO05D008323 3.0e-35 152.1 116 60.3
CDE07G1873 Ceratophyllum demersum HOM05D005997 ORTHO05D008323 6.2e-33 144.4 83 81.9
unitig_899.g15278 Utricularia gibba HOM05D005997 ORTHO05D008323 4.0e-32 141.7 82 78.0
Prupe.4G230300 Prunus persica HOM05D005997 ORTHO05D008323 6.9e-32 141.0 105 68.6
MELO3C024895.2 Cucumis melo HOM05D005997 ORTHO05D008323 1.6e-25 119.8 67 88.1
Glyma.18G084600 Glycine max HOM05D005997 ORTHO05D008323 6.9e-24 114.4 76 76.3
MCO09G728 Micromonas commoda HOM05D004293 ORTHO05D005044 6.9e-24 114.4 112 49.1
PRCOL_00002636 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 2.0e-23 112.8 114 52.6
PRCOL_00000116 Prasinoderma coloniale HOM05D005997 ORTHO05D008323 1.0e-22 110.5 110 49.1
MCO11G065 Micromonas commoda HOM05D004293 ORTHO05D005044 1.3e-22 110.2 112 47.3
Cre01.g039850 Chlamydomonas reinhardtii HOM05D005997 ORTHO05D005044 2.7e-20 102.4 122 43.4
QL05p025044 Quercus lobata HOM05D005997 ORTHO05D008323 2.7e-12 75.9 44 86.4
QL08p004262 Quercus lobata HOM05D005997 ORTHO05D008323 1.1e-10 70.5 48 77.1
QL08p058329 Quercus lobata HOM05D005997 ORTHO05D008323 1.1e-10 70.5 48 77.1
QL08p004281 Quercus lobata HOM05D005997 ORTHO05D007626 7.0e-08 61.2 38 81.6
QL08p004325 Quercus lobata HOM05D005997 ORTHO05D337094 3.8e-06 55.5 38 73.7
QL11p054366 Quercus lobata HOM05D005997 ORTHO05D338109 3.8e-06 55.5 38 73.7


User provided reference genes

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