Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016102 Camellia sinensis var. sinensis HOM05D007481 ORTHO05D009444 2.0e-146 522.3 249 100.0
Actinidia11588 Actinidia chinensis HOM05D007481 ORTHO05D009444 1.0e-126 456.8 248 85.9
Dinv04699 Davidia involucrata HOM05D007481 ORTHO05D009444 1.7e-124 449.5 247 85.0
GSVIVG01033961001 Vitis vinifera HOM05D007481 ORTHO05D009444 1.6e-114 416.4 248 77.8
Gohir.D09G160700 Gossypium hirsutum HOM05D007481 ORTHO05D009444 2.9e-113 412.1 246 76.4
TWI74G0365 Tripterygium wilfordii HOM05D007481 ORTHO05D009444 7.2e-112 407.5 246 77.2
CiPaw.10G156500 Carya illinoinensis HOM05D007481 ORTHO05D009444 2.1e-111 406.0 245 77.6
Potri.006G100100 Populus trichocarpa HOM05D007481 ORTHO05D009444 2.8e-111 405.6 247 78.9
Manes.09G104600 Manihot esculenta HOM05D007481 ORTHO05D009444 6.1e-111 404.4 245 78.8
Thecc.05G016400 Theobroma cacao HOM05D007481 ORTHO05D009444 2.3e-110 402.5 249 75.5
QL07p035708 Quercus lobata HOM05D007481 ORTHO05D009444 4.4e-109 398.3 247 76.5
RcHm_v2.0_Chr3g0463171 Rosa chinensis HOM05D007481 ORTHO05D009444 4.4e-109 398.3 248 75.4
Cc06_g01380 Coffea canephora HOM05D007481 ORTHO05D009444 2.8e-108 395.6 246 76.0
Gorai.006G182400 Gossypium raimondii HOM05D007481 ORTHO05D009444 2.8e-108 395.6 281 67.3
vmacro20262 Vaccinium macrocarpon HOM05D007481 ORTHO05D009444 8.3e-108 394.0 252 79.0
MD04G1152000 Malus domestica HOM05D007481 ORTHO05D009444 1.1e-107 393.7 248 73.4
Prupe.6G277100 Prunus persica HOM05D007481 ORTHO05D009444 1.1e-107 393.7 245 75.9
FAN05G5358 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.4e-107 392.5 247 74.9
Cfa017210 Carpinus fangiana HOM05D007481 ORTHO05D009444 3.1e-107 392.1 228 79.4
Eucgr.B02817 Eucalyptus grandis HOM05D007481 ORTHO05D009444 3.1e-107 392.1 249 74.3
MSTRG.10219 Avicennia marina HOM05D007481 ORTHO05D009444 5.4e-107 391.3 255 72.5
Sabra06G0076900 Salix brachista HOM05D007481 ORTHO05D009444 7.0e-107 391.0 247 76.1
PGSC0003DMG400011097 Solanum tuberosum HOM05D007481 ORTHO05D009444 7.0e-107 391.0 248 73.8
COL.COLO4_14539 Corchorus olitorius HOM05D007481 ORTHO05D009444 1.2e-106 390.2 255 72.5
Peaxi162Scf00009g01813 Petunia axillaris HOM05D007481 ORTHO05D009444 2.0e-106 389.4 247 73.7
CAN.G616.2 Capsicum annuum HOM05D007481 ORTHO05D009444 5.9e-106 387.9 248 73.0
Solyc10g085160.2 Solanum lycopersicum HOM05D007481 ORTHO05D009444 5.9e-106 387.9 248 73.4
Nitab4.5_0003666g0020 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.0e-105 387.1 246 76.4
Sopen10g034630 Solanum pennellii HOM05D007481 ORTHO05D009444 1.0e-105 387.1 248 73.4
CANSAT35G1044 Cannabis sativa HOM05D007481 ORTHO05D009444 2.9e-105 385.6 249 72.3
SGA_v2.0_scaffold240G44095 Striga asiatica HOM05D003907 ORTHO05D004819 8.6e-105 384.0 242 74.8
Ciclev10012584m.g Citrus clementina HOM05D007481 ORTHO05D009444 2.5e-104 382.5 245 73.5
Nn2g13707 Nelumbo nucifera HOM05D007481 ORTHO05D009444 4.3e-104 381.7 248 73.8
Migut.L02012 Erythranthe guttata HOM05D007481 ORTHO05D009444 1.2e-103 380.2 248 72.2
Sc07g0006570 Simmondsia chinensis HOM05D007481 ORTHO05D009444 2.1e-103 379.4 246 71.1
Medtr4g012440 Medicago truncatula HOM05D007481 ORTHO05D009444 2.8e-103 379.0 251 73.3
Sed0020862 Sechium edule HOM05D007481 ORTHO05D009444 1.0e-102 377.1 248 72.6
Lj3g0018029 Lotus japonicus HOM05D007481 ORTHO05D009444 1.4e-102 376.7 244 74.2
Glyma.03G058200 Glycine max HOM05D007481 ORTHO05D009444 4.0e-102 375.2 246 72.8
Rhsim05G0214800 Rhododendron simsii HOM05D007481 ORTHO05D009444 5.2e-102 374.8 303 63.7
ECA248G3524 Erigeron canadensis HOM05D007481 ORTHO05D009444 1.2e-101 373.6 244 72.5
Nitab4.5_0003024g0060 Nicotiana tabacum HOM05D007481 ORTHO05D009444 1.5e-101 373.2 260 71.9
Lalb_Chr07g0193571 Lupinus albus HOM05D007481 ORTHO05D009444 4.4e-101 371.7 242 70.7
Phvul.010G001400 Phaseolus vulgaris HOM05D007481 ORTHO05D009444 5.7e-101 371.3 246 72.0
Aa31LG1G23100 Aethionema arabicum HOM05D007481 ORTHO05D009444 1.7e-100 369.8 244 71.3
CsaV3_4G026270 Cucumis sativus L. HOM05D007481 ORTHO05D009444 1.7e-100 369.8 246 72.8
FAN02G0465 Fragaria x ananassa HOM05D007481 ORTHO05D009444 2.2e-100 369.4 238 73.5
PGR031G3607 Punica granatum HOM05D007481 ORTHO05D009444 2.9e-100 369.0 244 73.4
THA.LOC104816191 Tarenaya hassleriana HOM05D007481 ORTHO05D009444 2.9e-100 369.0 246 72.0
HanXRQChr01g0007111 Helianthus annuus HOM05D007481 ORTHO05D009444 3.7e-100 368.6 248 72.2
Psat7g244960 Pisum sativum HOM05D007481 ORTHO05D009444 2.4e-99 365.9 246 70.7
Ca_20231_v3 Cicer arietinum L. HOM05D007481 ORTHO05D009444 9.2e-99 364.0 246 71.1
FAN14G0098 Fragaria x ananassa HOM05D007481 ORTHO05D009444 9.2e-99 364.0 308 60.1
arahy.Tifrunner.gnm1.ann1.7RHW31 Arachis hypogaea HOM05D007481 ORTHO05D009444 2.0e-98 362.8 246 69.9
Lj3A953G52 Lonicera japonica HOM05D007481 ORTHO05D009444 5.9e-98 361.3 250 71.2
ClCG04G007010 Citrullus lanatus HOM05D007481 ORTHO05D009444 7.8e-98 360.9 247 70.4
TPR.G13336 Trifolium pratense HOM05D007481 ORTHO05D009444 1.3e-97 360.1 251 70.1
BolC2t06012H Brassica oleracea HOM05D007481 ORTHO05D009444 3.9e-97 358.6 243 70.0
Sp6g40760 Schrenkiella parvula HOM05D007481 ORTHO05D009444 6.6e-97 357.8 247 69.6
C02p00150 Brassica napus HOM05D007481 ORTHO05D009444 8.6e-97 357.5 243 70.0
BraA02t04685Z Brassica rapa HOM05D007481 ORTHO05D009444 8.6e-97 357.5 243 70.0
Duzib093G0021 Durio zibethinus HOM05D007481 ORTHO05D009444 2.5e-96 355.9 206 79.6
PSO801G0715 Papaver somniferum HOM05D007481 ORTHO05D009444 9.5e-96 354.0 249 68.3
CARHR211840 Cardamine hirsuta HOM05D007481 ORTHO05D009444 1.2e-95 353.6 247 68.4
arahy.Tifrunner.gnm1.ann1.6XTR6T Arachis hypogaea HOM05D007481 ORTHO05D009444 1.6e-95 353.2 246 68.3
AL6G10600 Arabidopsis lyrata HOM05D007481 ORTHO05D009444 2.8e-95 352.4 247 68.4
BcaB05g21923 Brassica carinata HOM05D007481 ORTHO05D009444 4.7e-95 351.7 247 68.4
BcaC03g13078 Brassica carinata HOM05D007481 ORTHO05D009444 4.7e-95 351.7 243 69.5
Thhalv10014504m.g Eutrema salsugineum HOM05D007481 ORTHO05D009444 8.0e-95 350.9 247 68.8
Ah.02g115900 Amaranthus hybridus HOM05D003907 ORTHO05D004819 1.8e-94 349.7 262 63.4
Aqoxy2G00902 Aquilegia oxysepala HOM05D007481 ORTHO05D009444 1.8e-94 349.7 251 66.1
AT5G01470 Arabidopsis thaliana HOM05D007481 ORTHO05D009444 2.3e-94 349.4 247 68.0
FAN09G2325 Fragaria x ananassa HOM05D007481 ORTHO05D009444 5.2e-94 348.2 248 68.5
Carub.0006s0036 Capsella rubella HOM05D007481 ORTHO05D009444 2.6e-93 345.9 243 67.9
PSO339G5056 Papaver somniferum HOM05D007481 ORTHO05D009444 1.7e-92 343.2 249 66.3
unitig_736.g22787 Utricularia gibba HOM05D007481 ORTHO05D009444 3.2e-91 339.0 235 66.0
Lsat_1_v5_gn_5_149561 Lactuca sativa HOM05D007481 ORTHO05D009444 1.1e-88 330.5 244 65.2
ATR0618G339 Amborella trichopoda HOM05D007481 ORTHO05D009444 6.2e-87 324.7 247 65.2
Gohir.A09G165100 Gossypium hirsutum HOM05D007481 ORTHO05D009444 9.9e-85 317.4 193 75.6
Hund11009 Selenicereus undatus HOM05D007481 ORTHO05D009444 1.7e-84 316.6 271 60.1
Haze_20985 Corylus avellana HOM05D007481 ORTHO05D009444 5.4e-83 311.6 256 62.9
TAR633G1799 Trochodendron aralioides HOM05D007481 ORTHO05D009444 1.0e-81 307.4 248 62.9
SalBow4G1731 Salvia bowleyana HOM05D007481 ORTHO05D009444 1.7e-81 306.6 201 72.1
Zm00001eb063270 Zea mays HOM05D007481 ORTHO05D009444 5.6e-80 301.6 254 58.3
FvH4_6g11480 Fragaria vesca HOM05D007481 ORTHO05D009444 2.8e-79 299.3 196 73.5
SEGI_08492 Sequoiadendron giganteum HOM05D007481 ORTHO05D009444 6.8e-78 294.7 280 54.6
MELO3C003292.2 Cucumis melo HOM05D007481 ORTHO05D009444 1.2e-77 293.9 191 71.7
Cpa.g.sc11.154 Carica papaya HOM05D007481 ORTHO05D009444 1.1e-75 287.3 243 61.7
Os03g0826700 Oryza sativa ssp. japonica HOM05D007481 ORTHO05D009444 2.4e-75 286.2 252 59.5
Pp3c17_21930 Physcomitrium patens HOM05D007481 ORTHO05D009444 2.3e-73 279.6 273 54.2
Mapoly0103s0024 Marchantia polymorpha HOM05D007481 ORTHO05D009444 3.1e-70 269.2 269 53.9
CDE02G3625 Ceratophyllum demersum HOM05D007481 ORTHO05D009444 2.6e-69 266.2 178 70.8
SMO119G0350 Selaginella moellendorffii HOM05D007481 ORTHO05D009444 6.4e-68 261.5 212 59.4
FAN14G2270 Fragaria x ananassa HOM05D000872 ORTHO05D000777 2.7e-66 256.1 290 50.7
AagrBONN_evm.TU.Sc2ySwM_228.1780 Anthoceros agrestis HOM05D007481 ORTHO05D009444 1.5e-64 250.4 213 56.3
CBR_g4113 Chara braunii HOM05D007481 ORTHO05D009444 5.6e-64 248.4 284 46.1
MBI14_g30737_MAGBIO Magnolia biondii HOM05D007481 ORTHO05D009444 9.0e-62 241.1 252 51.2
DCAR_015418 Daucus carota HOM05D007481 ORTHO05D009444 2.5e-56 223.0 134 75.4
VMungo0331G0457 Vigna mungo HOM05D007481 ORTHO05D009444 5.5e-51 205.3 136 71.3
HPP92_003771 Vanilla planifolia HOM05D007481 ORTHO05D009444 5.6e-48 195.3 181 55.8
Atru.chr8.2241 Acer truncatum HOM05D007481 ORTHO05D009444 4.8e-47 192.2 116 76.7
Oeu006297.1 Olea europaea HOM05D007481 ORTHO05D009444 4.3e-32 142.5 85 74.1
EL10Ac5g12562 Beta vulgaris HOM05D007481 ORTHO05D009444 1.2e-29 134.4 93 67.7
Eucgr.B02818 Eucalyptus grandis HOM05D007481 ORTHO05D009444 2.7e-26 123.2 90 63.3
AUR62030437 Chenopodium quinoa HOM05D007481 ORTHO05D009444 7.7e-13 78.6 40 80.0
PSO675G1483 Papaver somniferum HOM05D006745 ORTHO05D008449 4.8e-07 59.3 120 28.3
PSO541G1183 Papaver somniferum HOM05D006745 ORTHO05D008449 8.2e-07 58.5 121 29.8
Mapoly0001s0305 Marchantia polymorpha HOM05D002956 ORTHO05D008031 1.4e-06 57.8 190 27.4
RcHm_v2.0_Chr2g0101571 Rosa chinensis HOM05D005677 ORTHO05D006966 1.4e-06 57.8 197 25.9
MCO11G671 Micromonas commoda HOM05D005677 ORTHO05D006966 1.8e-06 57.4 144 27.8
FAN26G2780 Fragaria x ananassa HOM05D005677 ORTHO05D006966 2.4e-06 57.0 197 27.4
FvH4_1g13310 Fragaria vesca HOM05D005677 ORTHO05D006966 4.1e-06 56.2 197 27.4
FAN19G0062 Fragaria x ananassa HOM05D005677 ORTHO05D006966 5.3e-06 55.8 197 27.4


User provided reference genes

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