Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016085 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 3.3e-137 491.9 282 100.0
CSS0027643 Camellia sinensis var. sinensis HOM05D006646 ORTHO05D008279 1.0e-130 470.3 282 96.8
vmacro02064 Vaccinium macrocarpon HOM05D006646 ORTHO05D008279 7.1e-55 218.4 235 60.0
Dinv23471 Davidia involucrata HOM05D006646 ORTHO05D008279 1.2e-54 217.6 261 56.7
CiPaw.06G130600 Carya illinoinensis HOM05D006646 ORTHO05D008279 1.0e-53 214.5 143 77.6
Ciclev10028627m.g Citrus clementina HOM05D006646 ORTHO05D008279 3.7e-48 196.1 153 68.0
Hma1.2p1_0851F.1_g228260 Hydrangea macrophylla HOM05D006646 ORTHO05D008279 3.7e-48 196.1 279 52.3
Gohir.A12G041400 Gossypium hirsutum HOM05D006646 ORTHO05D008279 8.4e-48 194.9 141 70.9
PGSC0003DMG400003128 Solanum tuberosum HOM05D006646 ORTHO05D008279 8.4e-48 194.9 238 55.9
QL11p045794 Quercus lobata HOM05D006646 ORTHO05D008279 1.9e-47 193.7 254 52.4
Eucgr.G01718 Eucalyptus grandis HOM05D006646 ORTHO05D008279 7.1e-47 191.8 291 50.5
Gohir.D12G030800 Gossypium hirsutum HOM05D006646 ORTHO05D008279 9.2e-47 191.4 141 70.2
Gorai.008G031700 Gossypium raimondii HOM05D006646 ORTHO05D008279 9.2e-47 191.4 141 70.2
Potri.009G122500 Populus trichocarpa HOM05D006646 ORTHO05D008279 9.2e-47 191.4 254 50.8
CAN.G170.87 Capsicum annuum HOM05D006646 ORTHO05D008279 1.2e-46 191.0 242 52.9
DCAR_022798 Daucus carota HOM05D006646 ORTHO05D008279 1.6e-46 190.7 266 50.4
Duzib132G1122 Durio zibethinus HOM05D006646 ORTHO05D008279 2.7e-46 189.9 231 53.7
Migut.B00188 Erythranthe guttata HOM05D006646 ORTHO05D008279 4.6e-46 189.1 287 47.7
HanXRQChr05g0139661 Helianthus annuus HOM05D006646 ORTHO05D008279 4.6e-46 189.1 240 52.1
Sopen01g052420 Solanum pennellii HOM05D006646 ORTHO05D008279 4.6e-46 189.1 238 55.5
Oeu008579.1 Olea europaea HOM05D006646 ORTHO05D008279 6.0e-46 188.7 160 66.2
Solyc01g110270.3 Solanum lycopersicum HOM05D006646 ORTHO05D008279 7.8e-46 188.3 239 56.1
Cpa.g.sc150.36 Carica papaya HOM05D006646 ORTHO05D008279 1.0e-45 188.0 149 67.1
Peaxi162Scf00016g00142 Petunia axillaris HOM05D006646 ORTHO05D008279 1.3e-45 187.6 175 64.6
Manes.04G084900 Manihot esculenta HOM05D006646 ORTHO05D008279 1.1e-44 184.5 289 50.9
COL.COLO4_26029 Corchorus olitorius HOM05D006646 ORTHO05D008279 1.5e-44 184.1 251 51.4
Thecc.02G077600 Theobroma cacao HOM05D006646 ORTHO05D008279 1.5e-44 184.1 229 51.5
TAR376G0115 Trochodendron aralioides HOM05D006646 ORTHO05D008279 2.5e-44 183.3 254 51.6
Cfa005079 Carpinus fangiana HOM05D006646 ORTHO05D008279 7.3e-44 181.8 148 66.2
Lsat_1_v5_gn_4_68441 Lactuca sativa HOM05D006646 ORTHO05D008279 7.3e-44 181.8 159 64.2
Nitab4.5_0010034g0020 Nicotiana tabacum HOM05D006646 ORTHO05D008279 1.2e-43 181.0 288 48.6
GSVIVG01024200001 Vitis vinifera HOM05D006646 ORTHO05D008279 1.6e-43 180.6 141 69.5
MSTRG.16840 Avicennia marina HOM05D006646 ORTHO05D008279 2.8e-43 179.9 147 69.4
ECA247G1974 Erigeron canadensis HOM05D006646 ORTHO05D008279 4.7e-43 179.1 126 72.2
Nn6g32216 Nelumbo nucifera HOM05D006646 ORTHO05D008279 4.7e-43 179.1 252 48.8
PGR042G2699 Punica granatum HOM05D006646 ORTHO05D008279 6.2e-43 178.7 165 62.4
Aqoxy6G02397 Aquilegia oxysepala HOM05D006646 ORTHO05D008279 1.1e-42 177.9 171 58.5
MBI05_g30638_MAGBIO Magnolia biondii HOM05D006646 ORTHO05D008279 1.2e-41 174.5 142 70.4
Glyma.11G112300 Glycine max HOM05D006646 ORTHO05D008279 3.4e-41 172.9 239 47.7
MD10G1065400 Malus domestica HOM05D006646 ORTHO05D008279 3.4e-41 172.9 247 47.4
VMungo1127G0939 Vigna mungo HOM05D006646 ORTHO05D008279 4.4e-41 172.6 235 50.2
TWI75G0841 Tripterygium wilfordii HOM05D006646 ORTHO05D008279 7.6e-41 171.8 233 47.6
SGA_v2.0_scaffold58G20474 Striga asiatica HOM05D006646 ORTHO05D008279 9.9e-41 171.4 254 44.9
arahy.Tifrunner.gnm1.ann1.I36BMJ Arachis hypogaea HOM05D006646 ORTHO05D008279 2.2e-40 170.2 269 47.6
THA.LOC104807761 Tarenaya hassleriana HOM05D006646 ORTHO05D008279 2.2e-40 170.2 299 45.5
Cc02_g17030 Coffea canephora HOM05D006646 ORTHO05D008279 2.9e-40 169.9 276 46.4
Prupe.8G087400 Prunus persica HOM05D006646 ORTHO05D008279 2.9e-40 169.9 274 47.8
Phvul.011G040400 Phaseolus vulgaris HOM05D006646 ORTHO05D008279 4.9e-40 169.1 211 50.7
MELO3C013428.2 Cucumis melo HOM05D006646 ORTHO05D008279 6.4e-40 168.7 168 54.2
CsaV3_7G000290 Cucumis sativus L. HOM05D006646 ORTHO05D008279 6.4e-40 168.7 140 63.6
EL10Ac9g21659 Beta vulgaris HOM05D006646 ORTHO05D008279 8.4e-40 168.3 140 62.1
TPR.G16241 Trifolium pratense HOM05D006646 ORTHO05D008279 1.1e-39 167.9 285 48.8
Lalb_Chr01g0002221 Lupinus albus HOM05D006646 ORTHO05D008279 1.4e-39 167.5 254 46.9
SalBow6G1011 Salvia bowleyana HOM05D006646 ORTHO05D008279 1.9e-39 167.2 249 47.8
ATR0661G343 Amborella trichopoda HOM05D006646 ORTHO05D008279 3.2e-39 166.4 153 61.4
CDE09G0634 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 5.4e-39 165.6 164 58.5
Atru.chr5.3116 Acer truncatum HOM05D006646 ORTHO05D008279 7.1e-39 165.2 160 56.2
Sed0001649 Sechium edule HOM05D006646 ORTHO05D008279 9.3e-39 164.9 248 47.2
CDE02G3850 Ceratophyllum demersum HOM05D006646 ORTHO05D008279 1.6e-38 164.1 138 63.8
Sed0000071 Sechium edule HOM05D006646 ORTHO05D008279 2.7e-38 163.3 226 47.8
FvH4_2g10110 Fragaria vesca HOM05D006646 ORTHO05D008279 4.6e-38 162.5 234 46.2
Haze_02302 Corylus avellana HOM05D006646 ORTHO05D008279 6.0e-38 162.2 288 46.2
Sc18g0005310 Simmondsia chinensis HOM05D006646 ORTHO05D008279 6.0e-38 162.2 127 70.9
AUR62016804 Chenopodium quinoa HOM05D006646 ORTHO05D008279 1.0e-37 161.4 169 53.8
FAN24G1192 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.3e-37 161.0 234 46.2
FAN15G0580 Fragaria x ananassa HOM05D006646 ORTHO05D008279 1.7e-37 160.6 223 47.1
PSO541G0619 Papaver somniferum HOM05D006646 ORTHO05D008279 2.3e-37 160.2 246 46.3
Aa31LG6G16210 Aethionema arabicum HOM05D006646 ORTHO05D008279 5.1e-37 159.1 180 55.6
Psat0s2721g0040 Pisum sativum HOM05D006646 ORTHO05D008279 5.1e-37 159.1 247 46.6
unitig_32.g11060 Utricularia gibba HOM05D006646 ORTHO05D008279 5.1e-37 159.1 114 73.7
FAN27G0283 Fragaria x ananassa HOM05D006646 ORTHO05D008279 6.6e-37 158.7 230 47.8
RcHm_v2.0_Chr6g0267071 Rosa chinensis HOM05D006646 ORTHO05D008279 6.6e-37 158.7 233 48.9
Lj3g0021213 Lotus japonicus HOM05D006646 ORTHO05D008279 8.7e-37 158.3 172 56.4
arahy.Tifrunner.gnm1.ann1.RI2JL3 Arachis hypogaea HOM05D006646 ORTHO05D008279 1.5e-36 157.5 254 48.4
Medtr4g071330 Medicago truncatula HOM05D006646 ORTHO05D008279 1.5e-36 157.5 260 48.5
Ca_20923_v3 Cicer arietinum L. HOM05D006646 ORTHO05D008279 5.6e-36 155.6 286 45.8
Sp7g36790 Schrenkiella parvula HOM05D006646 ORTHO05D008279 1.6e-35 154.1 176 54.5
BraA06t27738Z Brassica rapa HOM05D006646 ORTHO05D008279 3.6e-35 152.9 171 54.4
Hund06269 Selenicereus undatus HOM05D006646 ORTHO05D008279 4.8e-35 152.5 262 43.5
A06p48720 Brassica napus HOM05D006646 ORTHO05D008279 6.2e-35 152.1 171 54.4
CARHR247710 Cardamine hirsuta HOM05D006646 ORTHO05D008279 1.1e-34 151.4 299 41.5
ClCG02G004640 Citrullus lanatus HOM05D006646 ORTHO05D008279 1.4e-34 151.0 199 50.3
BcaNung01943 Brassica carinata HOM05D006646 ORTHO05D008279 9.0e-34 148.3 145 57.2
C07p63380 Brassica napus HOM05D006646 ORTHO05D008279 9.0e-34 148.3 145 57.2
BolC7t46749H Brassica oleracea HOM05D006646 ORTHO05D008279 2.0e-33 147.1 176 52.3
AL7G10980 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 9.9e-33 144.8 170 52.9
AT2G21350 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 1.4e-31 141.0 101 70.3
Carub.0007s0091 Capsella rubella HOM05D006646 ORTHO05D008279 1.4e-31 141.0 298 42.6
Thhalv10025960m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.4e-31 141.0 198 45.5
AT4G39040 Arabidopsis thaliana HOM05D006646 ORTHO05D008279 3.2e-31 139.8 120 61.7
CARHR112230 Cardamine hirsuta HOM05D006646 ORTHO05D008279 3.2e-31 139.8 99 72.7
HPP92_007403 Vanilla planifolia HOM05D006646 ORTHO05D008279 1.2e-30 137.9 222 45.0
Carub.0004s0039 Capsella rubella HOM05D006646 ORTHO05D008279 6.0e-30 135.6 216 45.4
AL4G10520 Arabidopsis lyrata HOM05D006646 ORTHO05D008279 7.9e-30 135.2 165 51.5
Os10g0512500 Oryza sativa ssp. japonica HOM05D006646 ORTHO05D008279 1.0e-29 134.8 156 49.4
A04p16110 Brassica napus HOM05D006646 ORTHO05D008279 2.5e-28 130.2 189 47.1
BraA04t17251Z Brassica rapa HOM05D006646 ORTHO05D008279 2.5e-28 130.2 189 47.1
BolC4t26655H Brassica oleracea HOM05D006646 ORTHO05D008279 7.4e-28 128.6 191 47.6
Sp4g00530 Schrenkiella parvula HOM05D006646 ORTHO05D008279 7.4e-28 128.6 112 61.6
BcaC02g08796 Brassica carinata HOM05D006646 ORTHO05D008279 1.3e-27 127.9 190 47.9
C04p50570 Brassica napus HOM05D006646 ORTHO05D008279 1.3e-27 127.9 190 47.9
Nitab4.5_0002723g0110 Nicotiana tabacum HOM05D006646 ORTHO05D008279 2.1e-27 127.1 286 39.9
Thhalv10000312m.g Eutrema salsugineum HOM05D006646 ORTHO05D008279 1.1e-26 124.8 110 61.8
AUR62010412 Chenopodium quinoa HOM05D006646 ORTHO05D008279 5.5e-23 112.5 143 46.9
Mapoly0113s0060 Marchantia polymorpha HOM05D006646 ORTHO05D008279 1.5e-20 104.4 115 47.0
CBR_g11057 Chara braunii HOM05D006646 ORTHO05D008279 1.3e-19 101.3 108 47.2
AagrBONN_evm.TU.Sc2ySwM_344.4239 Anthoceros agrestis HOM05D006646 ORTHO05D008279 1.8e-18 97.4 110 50.0
FAN09G3166 Fragaria x ananassa HOM05D006646 ORTHO05D008279 5.8e-17 92.4 79 59.5
FAN24G0918 Fragaria x ananassa HOM05D001806 ORTHO05D002069 5.8e-17 92.4 78 60.3
Pp3c1_22260 Physcomitrium patens HOM05D006646 ORTHO05D008279 2.2e-16 90.5 147 38.1
FAN05G0067 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-16 90.1 58 74.1
FAN05G1359 Fragaria x ananassa HOM05D006646 ORTHO05D008279 2.9e-16 90.1 58 74.1
arahy.Tifrunner.gnm1.ann1.1G50NI Arachis hypogaea HOM05D006646 ORTHO05D008279 3.8e-16 89.7 54 79.6
FAN19G2814 Fragaria x ananassa HOM05D006646 ORTHO05D008279 3.8e-16 89.7 77 59.7
FAN18G1095 Fragaria x ananassa HOM05D006646 ORTHO05D008279 8.4e-16 88.6 59 71.2
CANSAT11G0453 Cannabis sativa HOM05D006646 ORTHO05D008279 7.1e-15 85.5 60 68.3
Lj5P190T58 Lonicera japonica HOM05D006646 ORTHO05D008279 3.5e-14 83.2 54 74.1
BcaNung01286 Brassica carinata HOM05D006646 ORTHO05D008279 6.0e-14 82.4 112 51.8
Zm00001eb220380 Zea mays HOM05D006646 ORTHO05D008279 9.6e-12 75.1 54 68.5
Haze_22123 Corylus avellana HOM05D006646 ORTHO05D008279 3.1e-10 70.1 52 69.2
SMO367G1025 Selaginella moellendorffii HOM05D006646 ORTHO05D008279 1.5e-09 67.8 92 39.1
Nn3g17015 Nelumbo nucifera HOM05D000793 ORTHO05D000783 6.1e-06 55.8 101 34.7


User provided reference genes

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