Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016054 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 1.3e-140 503.1 255 100.0
CSS0018736 Camellia sinensis var. sinensis HOM05D006757 ORTHO05D004651 6.5e-116 421.0 214 99.1
Actinidia12418 Actinidia chinensis HOM05D006757 ORTHO05D004651 3.7e-63 245.7 236 59.3
Rhsim09G0078600 Rhododendron simsii HOM05D006757 ORTHO05D004651 2.6e-56 223.0 237 55.7
vmacro10765 Vaccinium macrocarpon HOM05D006757 ORTHO05D004651 1.3e-52 210.7 227 55.5
Dinv02708 Davidia involucrata HOM05D006757 ORTHO05D004651 1.4e-46 190.7 242 51.2
GSVIVG01010290001 Vitis vinifera HOM05D006757 ORTHO05D004651 5.4e-46 188.7 233 50.2
Actinidia37474 Actinidia chinensis HOM05D006757 ORTHO05D004651 2.3e-44 183.3 195 56.4
TAR622G0072 Trochodendron aralioides HOM05D006757 ORTHO05D004651 1.7e-39 167.2 226 48.7
Hma1.2p1_0933F.1_g238400 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.0e-36 156.4 235 46.4
Hma1.2p1_0933F.1_g238410 Hydrangea macrophylla HOM05D006757 ORTHO05D004651 3.0e-36 156.4 235 46.4
CiPaw.05G164400 Carya illinoinensis HOM05D006757 ORTHO05D004651 2.1e-34 150.2 236 44.5
Prupe.1G340900 Prunus persica HOM05D006757 ORTHO05D004651 2.8e-34 149.8 233 45.5
QL03p041041 Quercus lobata HOM05D006757 ORTHO05D004651 4.8e-34 149.1 228 44.7
Potri.010G099300 Populus trichocarpa HOM05D006757 ORTHO05D004651 1.7e-31 140.6 216 42.1
Haze_10724 Corylus avellana HOM05D006757 ORTHO05D004651 4.9e-31 139.0 232 41.8
Sabra10G0071900 Salix brachista HOM05D006757 ORTHO05D004651 6.4e-31 138.7 235 40.9
Atru.chr11.1028 Acer truncatum HOM05D006757 ORTHO05D004651 8.4e-31 138.3 210 43.8
Thecc.02G299300 Theobroma cacao HOM05D006757 ORTHO05D004651 8.4e-31 138.3 205 43.9
Cpa.g.sc2.85 Carica papaya HOM05D006757 ORTHO05D004651 1.1e-30 137.9 226 41.2
DCAR_030323 Daucus carota HOM05D006757 ORTHO05D004651 2.4e-30 136.7 240 39.6
Gohir.D01G136700 Gossypium hirsutum HOM05D006757 ORTHO05D004651 3.5e-29 132.9 230 40.0
Duzib248G0842 Durio zibethinus HOM05D006757 ORTHO05D004651 7.9e-29 131.7 200 43.5
Gohir.A01G144000 Gossypium hirsutum HOM05D006757 ORTHO05D004651 1.7e-28 130.6 230 39.6
COL.COLO4_27539 Corchorus olitorius HOM05D006757 ORTHO05D004651 2.3e-28 130.2 235 42.1
Gorai.002G169200 Gossypium raimondii HOM05D006757 ORTHO05D004651 3.9e-28 129.4 230 39.1
Lj6C727G2 Lonicera japonica HOM05D006757 ORTHO05D004651 6.6e-28 128.6 242 43.4
FAN17G2536 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.1e-27 127.9 237 41.4
MD16G1009700 Malus domestica HOM05D006757 ORTHO05D004651 1.1e-27 127.9 213 44.1
FvH4_4g36030 Fragaria vesca HOM05D006757 ORTHO05D004651 1.5e-27 127.5 232 41.4
FAN22G1875 Fragaria x ananassa HOM05D006757 ORTHO05D004651 3.3e-27 126.3 232 41.4
RcHm_v2.0_Chr4g0445651 Rosa chinensis HOM05D006757 ORTHO05D004651 7.3e-27 125.2 232 39.2
Manes.17G092000 Manihot esculenta HOM05D006757 ORTHO05D004651 6.9e-25 118.6 228 39.9
Hund12802 Selenicereus undatus HOM05D006757 ORTHO05D004651 6.9e-25 118.6 231 35.1
Ciclev10006553m.g Citrus clementina HOM05D006757 ORTHO05D004651 9.0e-25 118.2 226 38.9
Sed0027541 Sechium edule HOM05D006757 ORTHO05D004651 2.0e-24 117.1 222 39.6
Nn4g24781 Nelumbo nucifera HOM05D006757 ORTHO05D004651 4.5e-24 115.9 218 40.4
MELO3C005216.2 Cucumis melo HOM05D006757 ORTHO05D004651 5.8e-24 115.5 223 38.6
FAN12G3615 Fragaria x ananassa HOM05D006757 ORTHO05D004651 5.8e-24 115.5 220 40.0
TWI53G1444 Tripterygium wilfordii HOM05D006757 ORTHO05D004651 2.2e-23 113.6 233 36.9
ClCG01G006950 Citrullus lanatus HOM05D006757 ORTHO05D004651 4.9e-23 112.5 220 39.5
Phvul.007G020500 Phaseolus vulgaris HOM05D006757 ORTHO05D004651 6.4e-23 112.1 217 41.5
Glyma.10G280500 Glycine max HOM05D006757 ORTHO05D004651 8.4e-23 111.7 208 41.8
PGR142G0977 Punica granatum HOM05D006757 ORTHO05D004651 1.9e-22 110.5 231 37.2
Ca_11197_v3 Cicer arietinum L. HOM05D006757 ORTHO05D004651 2.4e-22 110.2 214 41.1
Lj5g0011768 Lotus japonicus HOM05D006757 ORTHO05D004651 4.2e-22 109.4 217 39.6
CsaV3_5G017370 Cucumis sativus L. HOM05D006757 ORTHO05D004651 1.6e-21 107.5 221 38.0
VMungo0720G1053 Vigna mungo HOM05D006757 ORTHO05D004651 4.6e-21 105.9 208 39.9
Aqoxy3G04184 Aquilegia oxysepala HOM05D006757 ORTHO05D004651 1.0e-20 104.8 225 37.3
FAN07G0462 Fragaria x ananassa HOM05D006757 ORTHO05D004651 1.0e-20 104.8 146 47.3
PSO063G3495 Papaver somniferum HOM05D006757 ORTHO05D004651 1.3e-20 104.4 217 35.0
MSTRG.2098 Avicennia marina HOM05D006757 ORTHO05D004651 2.3e-20 103.6 236 34.3
CANSAT78G0289 Cannabis sativa HOM05D006757 ORTHO05D004651 3.9e-20 102.8 236 36.9
Lalb_Chr21g0306871 Lupinus albus HOM05D006757 ORTHO05D004651 1.5e-19 100.9 213 39.9
ECA233G5323 Erigeron canadensis HOM05D006757 ORTHO05D004651 7.4e-19 98.6 231 35.9
CAN.G282.84 Capsicum annuum HOM05D006757 ORTHO05D004651 4.8e-18 95.9 209 32.5
Cc11_g03340 Coffea canephora HOM05D006757 ORTHO05D004651 6.2e-18 95.5 225 35.1
Eucgr.G02041 Eucalyptus grandis HOM05D006757 ORTHO05D004651 6.2e-18 95.5 233 33.9
arahy.Tifrunner.gnm1.ann1.18R96V Arachis hypogaea HOM05D006757 ORTHO05D004651 8.1e-18 95.1 205 36.6
arahy.Tifrunner.gnm1.ann1.CLVE3A Arachis hypogaea HOM05D006757 ORTHO05D004651 8.1e-18 95.1 205 36.6
Migut.E00572 Erythranthe guttata HOM05D006757 ORTHO05D004651 3.1e-17 93.2 204 38.7
HanXRQChr12g0365871 Helianthus annuus HOM05D006757 ORTHO05D004651 6.9e-17 92.0 229 31.9
Sopen01g003410 Solanum pennellii HOM05D006757 ORTHO05D004651 3.4e-16 89.7 209 30.1
Solyc01g007880.4 Solanum lycopersicum HOM05D006757 ORTHO05D004651 5.8e-16 89.0 209 30.6
TPR.G2437 Trifolium pratense HOM05D006757 ORTHO05D004651 3.8e-15 86.3 210 37.1
Peaxi162Scf00097g00232 Petunia axillaris HOM05D006757 ORTHO05D004651 6.5e-15 85.5 212 32.1
SalBow2G2705 Salvia bowleyana HOM05D006757 ORTHO05D004651 8.4e-15 85.1 237 32.9
AUR62017786 Chenopodium quinoa HOM05D006757 ORTHO05D004651 7.1e-14 82.0 147 37.4
Psat6g231440 Pisum sativum HOM05D006757 ORTHO05D004651 2.1e-13 80.5 210 35.2
COL.COLO4_13886 Corchorus olitorius HOM05D003428 ORTHO05D004131 3.5e-13 79.7 242 33.1
Medtr1g112280 Medicago truncatula HOM05D006757 ORTHO05D004651 7.9e-13 78.6 210 35.7
Nitab4.5_0004543g0020 Nicotiana tabacum HOM05D006757 ORTHO05D004651 1.8e-12 77.4 222 29.7
ATR0807G004 Amborella trichopoda HOM05D006757 ORTHO05D004651 3.9e-12 76.3 156 40.4
EL10Ac6g15397 Beta vulgaris HOM05D006757 ORTHO05D004651 1.9e-11 73.9 159 37.1
AUR62003477 Chenopodium quinoa HOM05D006757 ORTHO05D004651 2.5e-11 73.6 166 32.5
Sc17g0005480 Simmondsia chinensis HOM05D006757 ORTHO05D004651 1.8e-09 67.4 106 40.6
SGA_v2.0_scaffold470G52072 Striga asiatica HOM05D006757 ORTHO05D004651 3.4e-08 63.2 225 33.3
Lsat_1_v5_gn_8_33901 Lactuca sativa HOM05D006757 ORTHO05D004651 4.5e-08 62.8 239 28.5


User provided reference genes

Program Settings