Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016052 Camellia sinensis var. sinensis HOM05D000590 ORTHO05D006825 3.5e-64 248.1 119 100.0
Actinidia28121 Actinidia chinensis HOM05D000590 ORTHO05D006825 4.9e-58 227.6 117 92.3
Rhsim01G0172200 Rhododendron simsii HOM05D000590 ORTHO05D006825 4.8e-53 211.1 117 84.6
GSVIVG01027095001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.8e-53 211.1 117 81.2
GSVIVG01027098001 Vitis vinifera HOM05D000590 ORTHO05D006825 4.8e-53 211.1 117 81.2
Lj7A501T47 Lonicera japonica HOM05D000590 ORTHO05D006825 3.1e-52 208.4 117 82.1
vmacro12678 Vaccinium macrocarpon HOM05D000590 ORTHO05D001713 9.0e-52 206.8 117 83.8
Oeu015362.1 Olea europaea HOM05D000590 ORTHO05D006825 3.4e-51 204.9 117 80.3
MSTRG.17339 Avicennia marina HOM05D000590 ORTHO05D006825 9.9e-51 203.4 117 80.3
SGA_v2.0_scaffold5G03015 Striga asiatica HOM05D000590 ORTHO05D006825 6.4e-50 200.7 117 76.9
TAR375G0589 Trochodendron aralioides HOM05D000590 ORTHO05D006825 1.1e-49 199.9 117 76.9
SalBow3G4091 Salvia bowleyana HOM05D000590 ORTHO05D006825 1.4e-49 199.5 117 80.3
Phvul.010G113800 Phaseolus vulgaris HOM05D000590 ORTHO05D006825 2.4e-49 198.7 117 78.6
arahy.Tifrunner.gnm1.ann1.0G81PD Arachis hypogaea HOM05D000590 ORTHO05D006825 3.2e-49 198.4 117 77.8
Migut.B01870 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.2e-49 198.0 117 76.1
Glyma.16G025000 Glycine max HOM05D000590 ORTHO05D006825 4.2e-49 198.0 117 77.8
CANSAT56G2355 Cannabis sativa HOM05D000590 ORTHO05D006825 9.3e-49 196.8 117 76.1
VMungo0331G1406 Vigna mungo HOM05D000590 ORTHO05D000717 1.2e-48 196.4 117 76.9
Aqoxy5G04231 Aquilegia oxysepala HOM05D000590 ORTHO05D006825 1.6e-48 196.1 117 76.1
PGSC0003DMG400000222 Solanum tuberosum HOM05D000590 ORTHO05D006825 1.6e-48 196.1 119 75.6
RcHm_v2.0_Chr1g0359371 Rosa chinensis HOM05D000590 ORTHO05D006825 2.1e-48 195.7 117 75.2
Solyc01g095870.3 Solanum lycopersicum HOM05D000590 ORTHO05D006825 2.1e-48 195.7 119 75.6
Sopen01g039610 Solanum pennellii HOM05D000590 ORTHO05D006825 2.1e-48 195.7 119 75.6
Nitab4.5_0000838g0230 Nicotiana tabacum HOM05D000590 ORTHO05D006825 6.0e-48 194.1 117 74.4
Nitab4.5_0004999g0020 Nicotiana tabacum HOM05D000590 ORTHO05D006825 6.0e-48 194.1 117 74.4
Peaxi162Scf00786g00323 Petunia axillaris HOM05D000590 ORTHO05D006825 6.0e-48 194.1 117 74.4
Lalb_Chr10g0100491 Lupinus albus HOM05D000590 ORTHO05D006825 1.0e-47 193.4 117 75.2
PGR031G1800 Punica granatum HOM05D000590 ORTHO05D006825 1.0e-47 193.4 117 72.6
FAN06G0495 Fragaria x ananassa HOM05D000590 ORTHO05D006825 1.3e-47 193.0 117 74.4
CAN.G986.8 Capsicum annuum HOM05D000590 ORTHO05D006825 2.3e-47 192.2 118 74.6
Prupe.2G187500 Prunus persica HOM05D000590 ORTHO05D006825 2.3e-47 192.2 117 76.1
FAN10G1076 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.0e-47 191.8 117 74.4
MD01G1080100 Malus domestica HOM05D000590 ORTHO05D006825 3.0e-47 191.8 117 73.5
FAN01G2486 Fragaria x ananassa HOM05D000590 ORTHO05D006825 3.9e-47 191.4 117 73.5
FAN06G0513 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.1e-47 191.0 117 73.5
FAN10G3131 Fragaria x ananassa HOM05D000590 ORTHO05D006825 5.1e-47 191.0 117 73.5
TPR.G15352 Trifolium pratense HOM05D000590 ORTHO05D006825 1.1e-46 189.9 117 74.4
Psat4g160760 Pisum sativum HOM05D000590 ORTHO05D006825 1.5e-46 189.5 117 74.4
Lsat_1_v5_gn_7_1240 Lactuca sativa HOM05D000590 ORTHO05D006825 1.9e-46 189.1 117 70.1
FvH4_7g16360 Fragaria vesca HOM05D000590 ORTHO05D006825 2.5e-46 188.7 117 74.4
Dinv35112 Davidia involucrata HOM05D000590 ORTHO05D006825 3.3e-46 188.3 117 76.9
Lj3g0003332 Lotus japonicus HOM05D000590 ORTHO05D006825 7.3e-46 187.2 117 72.6
Haze_15659 Corylus avellana HOM05D000590 ORTHO05D006825 1.6e-45 186.0 117 74.4
MELO3C022415.2 Cucumis melo HOM05D000590 ORTHO05D006825 3.6e-45 184.9 117 72.6
CsaV3_6G007130 Cucumis sativus L. HOM05D000590 ORTHO05D006825 3.6e-45 184.9 117 72.6
Cc02_g39290 Coffea canephora HOM05D000590 ORTHO05D006825 4.8e-45 184.5 117 71.8
TWI59G0780 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 1.4e-44 183.0 117 69.2
EL10Ac1g00275 Beta vulgaris HOM05D000590 ORTHO05D006825 4.0e-44 181.4 117 67.5
AUR62004487 Chenopodium quinoa HOM05D000590 ORTHO05D006825 4.0e-44 181.4 117 65.0
AUR62023466 Chenopodium quinoa HOM05D000590 ORTHO05D006825 4.0e-44 181.4 117 65.0
Cfa003800 Carpinus fangiana HOM05D000590 ORTHO05D001713 2.0e-43 179.1 117 70.1
Sed0003230 Sechium edule HOM05D000590 ORTHO05D006825 3.4e-43 178.3 117 70.1
Migut.N01547 Erythranthe guttata HOM05D000590 ORTHO05D006825 4.5e-43 177.9 117 71.8
Gohir.A08G034400 Gossypium hirsutum HOM05D000590 ORTHO05D006825 5.8e-43 177.6 117 70.1
Gohir.D08G044900 Gossypium hirsutum HOM05D000590 ORTHO05D006825 5.8e-43 177.6 117 70.1
Oeu004946.1 Olea europaea HOM05D000590 ORTHO05D006825 5.8e-43 177.6 117 70.1
Gorai.004G043900 Gossypium raimondii HOM05D000590 ORTHO05D006825 7.6e-43 177.2 117 70.1
CiPaw.02G040500 Carya illinoinensis HOM05D000590 ORTHO05D006825 3.8e-42 174.9 117 70.1
FAN03G1068 Fragaria x ananassa HOM05D000590 ORTHO05D006825 4.9e-42 174.5 108 71.3
QL04p061137 Quercus lobata HOM05D000590 ORTHO05D006825 4.9e-42 174.5 117 66.7
Sc26g0000670 Simmondsia chinensis HOM05D000590 ORTHO05D006825 4.9e-42 174.5 117 66.7
TWI14G0815 Tripterygium wilfordii HOM05D000590 ORTHO05D006825 6.4e-42 174.1 117 62.4
Nn2g14772 Nelumbo nucifera HOM05D000590 ORTHO05D006825 1.1e-41 173.3 118 70.3
Duzib133G1228 Durio zibethinus HOM05D000590 ORTHO05D006825 1.9e-41 172.6 117 70.9
PSO782G3674 Papaver somniferum HOM05D000590 ORTHO05D006825 3.2e-41 171.8 119 67.2
PSO478G0645 Papaver somniferum HOM05D000590 ORTHO05D006825 4.2e-41 171.4 119 67.2
Sp5g01640 Schrenkiella parvula HOM05D000590 ORTHO05D006825 5.4e-41 171.0 117 65.8
CDE02G3030 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 7.1e-41 170.6 117 64.1
HanXRQChr04g0120221 Helianthus annuus HOM05D000590 ORTHO05D006825 7.1e-41 170.6 117 63.2
AL5G44280 Arabidopsis lyrata HOM05D000590 ORTHO05D006825 1.2e-40 169.9 117 65.0
AT3G61730 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 1.2e-40 169.9 117 65.0
CARHR172060 Cardamine hirsuta HOM05D000590 ORTHO05D006825 1.2e-40 169.9 117 65.8
Duzib138G1692 Durio zibethinus HOM05D000590 ORTHO05D006825 1.6e-40 169.5 118 70.3
Eucgr.D02371 Eucalyptus grandis HOM05D000590 ORTHO05D006825 1.6e-40 169.5 117 65.8
THA.LOC104817360 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.1e-40 169.1 117 66.7
MBI06_g08454_MAGBIO Magnolia biondii HOM05D000590 ORTHO05D006825 2.7e-40 168.7 117 65.0
Thhalv10006430m.g Eutrema salsugineum HOM05D000590 ORTHO05D006825 4.6e-40 167.9 117 64.1
ATR0602G065 Amborella trichopoda HOM05D000590 ORTHO05D006825 6.0e-40 167.5 117 62.4
Cpa.g.sc96.9 Carica papaya HOM05D000590 ORTHO05D006825 6.0e-40 167.5 117 65.0
PSO063G6641 Papaver somniferum HOM05D000590 ORTHO05D006825 7.9e-40 167.2 119 63.9
Potri.014G098300 Populus trichocarpa HOM05D000590 ORTHO05D006825 1.0e-39 166.8 118 66.9
AT5G36000 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 2.3e-39 165.6 117 63.2
BcaB02g08143 Brassica carinata HOM05D000590 ORTHO05D006825 3.0e-39 165.2 117 63.2
Manes.01G246600 Manihot esculenta HOM05D000590 ORTHO05D006825 6.7e-39 164.1 117 63.2
Ciclev10023676m.g Citrus clementina HOM05D000590 ORTHO05D006825 1.9e-38 162.5 117 60.7
DCAR_006973 Daucus carota HOM05D000590 ORTHO05D006825 1.9e-38 162.5 91 78.0
Aa31LG10G15730 Aethionema arabicum HOM05D000590 ORTHO05D001713 4.3e-38 161.4 117 63.2
BolC6t37952H Brassica oleracea HOM05D000590 ORTHO05D006825 2.8e-37 158.7 117 59.8
Sabra14G0072100 Salix brachista HOM05D000590 ORTHO05D001713 2.8e-37 158.7 137 59.1
CDE02G2715 Ceratophyllum demersum HOM05D000590 ORTHO05D006825 8.1e-37 157.1 117 60.7
BraA04t15812Z Brassica rapa HOM05D000590 ORTHO05D006825 1.8e-36 156.0 117 61.5
THA.LOC104802069 Tarenaya hassleriana HOM05D000590 ORTHO05D006825 2.4e-36 155.6 117 61.5
SEGI_01413 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 5.3e-36 154.5 117 58.1
SEGI_08329 Sequoiadendron giganteum HOM05D000590 ORTHO05D006825 9.0e-36 153.7 117 58.1
Ca_23539_v3 Cicer arietinum L. HOM05D000590 ORTHO05D006825 3.8e-34 148.3 97 69.1
Ah.05g179600 Amaranthus hybridus HOM05D000590 ORTHO05D006825 6.5e-34 147.5 95 66.3
Medtr8g027735 Medicago truncatula HOM05D000590 ORTHO05D006825 6.5e-34 147.5 92 71.7
ECA236G1053 Erigeron canadensis HOM05D000590 ORTHO05D001713 6.7e-31 137.5 91 63.7
Thecc.01G343200 Theobroma cacao HOM05D000590 ORTHO05D006825 2.1e-29 132.5 91 65.9
BcaC02g10247 Brassica carinata HOM05D000590 ORTHO05D006825 2.8e-29 132.1 117 54.7
C04p31120 Brassica napus HOM05D000590 ORTHO05D006825 2.8e-29 132.1 117 54.7
Atru.chr5.661 Acer truncatum HOM05D000590 ORTHO05D006825 6.9e-28 127.5 118 52.5
AT3G62500 Arabidopsis thaliana HOM05D000590 ORTHO05D006825 9.0e-28 127.1 96 60.4
COL.COLO4_06291 Corchorus olitorius HOM05D000590 ORTHO05D000717 1.2e-27 126.7 91 63.7
C06p27850 Brassica napus HOM05D004730 ORTHO05D006825 1.3e-26 123.2 91 59.3
C06p27910 Brassica napus HOM05D000590 ORTHO05D006825 1.3e-26 123.2 91 59.3
Pp3c6_8570 Physcomitrium patens HOM05D000590 ORTHO05D006825 8.4e-26 120.6 117 47.9
A04p00950 Brassica napus HOM05D000590 ORTHO05D006825 3.2e-25 118.6 101 53.5
A07p25690 Brassica napus HOM05D004730 ORTHO05D005705 4.2e-25 118.2 91 57.1
BraA07t30209Z Brassica rapa HOM05D004730 ORTHO05D005705 4.2e-25 118.2 91 57.1
arahy.Tifrunner.gnm1.ann1.06LZL4 Arachis hypogaea HOM05D000590 ORTHO05D006825 4.6e-24 114.8 61 85.2
ClCG06G001200 Citrullus lanatus HOM05D000590 ORTHO05D006825 1.3e-23 113.2 117 50.4
SMO164G0232 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 1.5e-22 109.8 119 42.0
SMO200G0118 Selaginella moellendorffii HOM05D000590 ORTHO05D006825 9.7e-22 107.1 119 42.0
CBR_g71803 Chara braunii HOM05D000590 ORTHO05D006825 8.2e-21 104.0 122 45.9
CBR_g49078 Chara braunii HOM05D000590 ORTHO05D006825 9.0e-20 100.5 122 43.4
SHI13291 Sapria himalayana HOM05D000590 ORTHO05D006825 1.4e-17 93.2 61 73.8
SMO338G0043 Selaginella moellendorffii HOM05D004142 ORTHO05D005411 3.2e-17 92.0 111 38.7
HPP92_002828 Vanilla planifolia HOM05D000590 ORTHO05D006825 3.2e-17 92.0 145 37.2
Mapoly0251s0003 Marchantia polymorpha HOM05D000590 ORTHO05D006825 1.6e-16 89.7 119 37.8
AagrBONN_evm.TU.Sc2ySwM_344.2724 Anthoceros agrestis HOM05D000590 ORTHO05D006825 2.7e-16 89.0 91 46.2
arahy.Tifrunner.gnm1.ann1.AM6JUY Arachis hypogaea HOM05D000590 ORTHO05D006825 4.6e-16 88.2 55 70.9
Os01g0219200 Oryza sativa ssp. japonica HOM05D000590 ORTHO05D006825 1.4e-15 86.7 120 41.7
Glyma.07G056100 Glycine max HOM05D000590 ORTHO05D006825 1.1e-14 83.6 55 65.5
Carub.0005s2847 Capsella rubella HOM05D000590 ORTHO05D006825 4.3e-14 81.6 55 61.8
Rhsim02G0230200 Rhododendron simsii HOM05D000590 ORTHO05D006825 2.8e-13 79.0 64 57.8
TPR.G3009 Trifolium pratense HOM05D000590 ORTHO05D006825 1.5e-11 73.2 50 62.0
Zm00001eb197190 Zea mays HOM05D002169 ORTHO05D023180 5.9e-11 71.2 109 37.6
HanXRQChr09g0243571 Helianthus annuus HOM05D000590 ORTHO05D006825 2.5e-09 65.9 54 50.0
TWI23G0685 Tripterygium wilfordii HOM05D000354 ORTHO05D000717 7.4e-06 54.3 31 67.7


User provided reference genes

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