Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016051 Camellia sinensis var. sinensis HOM05D001755 ORTHO05D001665 1.4e-56 222.6 106 100.0
arahy.Tifrunner.gnm1.ann1.IVYM6W Arachis hypogaea HOM05D001755 ORTHO05D001665 4.7e-28 127.9 107 67.3
Solyc12g087895.1 Solanum lycopersicum HOM05D001755 ORTHO05D001665 2.9e-25 118.6 116 61.2
ClCG10G009540 Citrullus lanatus HOM05D001755 ORTHO05D001665 1.4e-24 116.3 118 57.6
vmacro04680 Vaccinium macrocarpon HOM05D001755 ORTHO05D001665 5.4e-24 114.4 73 80.8
Nitab4.5_0011953g0010 Nicotiana tabacum HOM05D001755 ORTHO05D001665 7.8e-23 110.5 73 76.7
Sabra05G0120800 Salix brachista HOM05D001755 ORTHO05D001665 7.8e-23 110.5 83 71.1
arahy.Tifrunner.gnm1.ann1.KCV3PX Arachis hypogaea HOM05D001755 ORTHO05D001665 1.0e-22 110.2 106 58.5
vmacro21312 Vaccinium macrocarpon HOM05D001755 ORTHO05D001665 1.0e-22 110.2 75 81.3
Peaxi162Scf00281g00710 Petunia axillaris HOM05D001755 ORTHO05D001665 7.3e-21 104.0 71 74.6
Nn5g29940 Nelumbo nucifera HOM05D001755 ORTHO05D001665 6.2e-20 100.9 66 80.3
Peaxi162Scf00160g01119 Petunia axillaris HOM05D001755 ORTHO05D001665 6.2e-20 100.9 71 74.6
TAR381G0451 Trochodendron aralioides HOM05D001755 ORTHO05D001665 6.2e-20 100.9 66 80.3
MBI02_g18287_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 8.1e-20 100.5 65 80.0
CiPaw.07G168100 Carya illinoinensis HOM05D001755 ORTHO05D001665 1.1e-19 100.1 66 78.8
CiPaw.08G054200 Carya illinoinensis HOM05D001755 ORTHO05D001665 1.1e-19 100.1 66 78.8
CSS0010978 Camellia sinensis var. sinensis HOM05D001755 ORTHO05D001665 1.4e-19 99.8 65 80.0
CSS0046975 Camellia sinensis var. sinensis HOM05D001755 ORTHO05D001665 1.4e-19 99.8 65 80.0
ClCG00G003730 Citrullus lanatus HOM05D001755 ORTHO05D001665 1.4e-19 99.8 66 78.8
ClCG08G011500 Citrullus lanatus HOM05D001755 ORTHO05D001665 1.4e-19 99.8 66 78.8
Dinv44836 Davidia involucrata HOM05D001755 ORTHO05D001665 1.8e-19 99.4 65 78.5
Nitab4.5_0002025g0030 Nicotiana tabacum HOM05D001755 ORTHO05D001665 2.3e-19 99.0 70 74.3
Nitab4.5_0004381g0040 Nicotiana tabacum HOM05D001755 ORTHO05D001665 2.3e-19 99.0 70 74.3
CAN.G1658.7 Capsicum annuum HOM05D001755 ORTHO05D001665 3.1e-19 98.6 66 78.8
CiPaw.06G156900 Carya illinoinensis HOM05D001755 ORTHO05D001665 3.1e-19 98.6 66 78.8
Dinv24160 Davidia involucrata HOM05D001755 ORTHO05D001665 3.1e-19 98.6 65 78.5
Glyma.06G094800 Glycine max HOM05D001755 ORTHO05D001665 3.1e-19 98.6 66 75.8
MD08G1193000 Malus domestica HOM05D001755 ORTHO05D001665 3.1e-19 98.6 66 78.8
Prupe.1G527700 Prunus persica HOM05D001755 ORTHO05D001665 3.1e-19 98.6 66 78.8
Gohir.D05G267450 Gossypium hirsutum HOM05D001755 ORTHO05D001665 4.0e-19 98.2 66 77.3
Solyc04g076033.1 Solanum lycopersicum HOM05D001755 ORTHO05D001665 4.0e-19 98.2 65 78.5
Gorai.010G035900 Gossypium raimondii HOM05D001755 ORTHO05D001665 5.2e-19 97.8 65 76.9
CiPaw.05G031100 Carya illinoinensis HOM05D001755 ORTHO05D001665 6.8e-19 97.4 66 77.3
CsaV3_7G007020 Cucumis sativus L. HOM05D001755 ORTHO05D001665 6.8e-19 97.4 68 75.0
Manes.18G061200 Manihot esculenta HOM05D001755 ORTHO05D001665 8.9e-19 97.1 66 77.3
Potri.002G103400 Populus trichocarpa HOM05D001755 ORTHO05D001665 8.9e-19 97.1 66 77.3
Potri.005G158000 Populus trichocarpa HOM05D001755 ORTHO05D001665 8.9e-19 97.1 66 77.3
ATR0022G040 Amborella trichopoda HOM05D001755 ORTHO05D001665 1.2e-18 96.7 66 77.3
Glyma.04G093000 Glycine max HOM05D001755 ORTHO05D001665 1.2e-18 96.7 66 75.8
Gohir.A05G221300 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.2e-18 96.7 65 75.4
Gohir.A05G265200 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.2e-18 96.7 66 75.8
Gohir.D05G224000 Gossypium hirsutum HOM05D001755 ORTHO05D001665 1.2e-18 96.7 65 75.4
Gorai.009G231400 Gossypium raimondii HOM05D001755 ORTHO05D001665 1.2e-18 96.7 65 75.4
Phvul.008G179600 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 1.2e-18 96.7 66 77.3
Phvul.009G038300 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 1.2e-18 96.7 66 75.8
Sed0017446 Sechium edule HOM05D001755 ORTHO05D001665 1.2e-18 96.7 66 77.3
Nitab4.5_0001264g0230 Nicotiana tabacum HOM05D001755 ORTHO05D001665 1.5e-18 96.3 98 57.1
Nitab4.5_0001507g0060 Nicotiana tabacum HOM05D001755 ORTHO05D001665 1.5e-18 96.3 52 86.5
Oeu049223.1 Olea europaea HOM05D001755 ORTHO05D001665 1.5e-18 96.3 66 75.8
Ah.01g024020 Amaranthus hybridus HOM05D001755 ORTHO05D006340 2.0e-18 95.9 69 73.9
EL10Ac9g22086 Beta vulgaris HOM05D001755 ORTHO05D001665 2.6e-18 95.5 98 55.1
Dinv15987 Davidia involucrata HOM05D001755 ORTHO05D001665 2.6e-18 95.5 72 72.2
Glyma.02G212300 Glycine max HOM05D001755 ORTHO05D001665 2.6e-18 95.5 66 75.8
Glyma.14G180100 Glycine max HOM05D001755 ORTHO05D001665 2.6e-18 95.5 66 75.8
MD15G1381800 Malus domestica HOM05D001755 ORTHO05D001665 2.6e-18 95.5 66 75.8
Prupe.8G067700 Prunus persica HOM05D001755 ORTHO05D001665 2.6e-18 95.5 66 75.8
SGA_v2.0_scaffold219G42570 Striga asiatica HOM05D001755 ORTHO05D001665 2.6e-18 95.5 68 75.0
TPR.G18441 Trifolium pratense HOM05D001755 ORTHO05D001665 2.6e-18 95.5 72 70.8
FAN08G0378 Fragaria x ananassa HOM05D001755 ORTHO05D001665 3.4e-18 95.1 107 54.2
Gohir.A03G175950 Gossypium hirsutum HOM05D001755 ORTHO05D001665 3.4e-18 95.1 66 72.7
Gohir.D02G199750 Gossypium hirsutum HOM05D001755 ORTHO05D001665 3.4e-18 95.1 66 72.7
Gorai.005G224400 Gossypium raimondii HOM05D001755 ORTHO05D001665 3.4e-18 95.1 66 72.7
Manes.02G146800 Manihot esculenta HOM05D001755 ORTHO05D001665 3.4e-18 95.1 66 75.8
Hund27005 Selenicereus undatus HOM05D001755 ORTHO05D001665 3.4e-18 95.1 65 75.4
Actinidia10367 Actinidia chinensis HOM05D001755 ORTHO05D001665 4.4e-18 94.7 63 77.8
SEGI_04003 Sequoiadendron giganteum HOM05D001755 ORTHO05D001665 4.4e-18 94.7 65 73.8
ClCG09G015900 Citrullus lanatus HOM05D001755 ORTHO05D001665 5.8e-18 94.4 66 74.2
Duzib132G0573 Durio zibethinus HOM05D001755 ORTHO05D001665 5.8e-18 94.4 68 70.6
Oeu022087.1 Olea europaea HOM05D001755 ORTHO05D001665 5.8e-18 94.4 66 74.2
Hma1.2p1_0010F.1_g007000 Hydrangea macrophylla HOM05D001755 ORTHO05D001665 7.5e-18 94.0 67 70.1
Potri.007G112900 Populus trichocarpa HOM05D001755 ORTHO05D001665 7.5e-18 94.0 66 74.2
Rhsim05G0102500 Rhododendron simsii HOM05D001755 ORTHO05D001665 7.5e-18 94.0 65 76.9
RcHm_v2.0_Chr7g0237501 Rosa chinensis HOM05D001755 ORTHO05D001665 7.5e-18 94.0 66 74.2
Sed0017055 Sechium edule HOM05D001755 ORTHO05D001665 7.5e-18 94.0 66 74.2
arahy.Tifrunner.gnm1.ann1.KFP2BM Arachis hypogaea HOM05D001755 ORTHO05D001665 9.8e-18 93.6 65 72.3
arahy.Tifrunner.gnm1.ann1.NI9N2T Arachis hypogaea HOM05D001755 ORTHO05D001665 9.8e-18 93.6 65 72.3
Sabra07G0092200 Salix brachista HOM05D001755 ORTHO05D001665 9.8e-18 93.6 65 73.8
Thecc.02G132000 Theobroma cacao HOM05D001755 ORTHO05D001665 9.8e-18 93.6 66 71.2
DCAR_012866 Daucus carota HOM05D001755 ORTHO05D001665 1.3e-17 93.2 65 73.8
Dinv42637 Davidia involucrata HOM05D001755 ORTHO05D001665 1.7e-17 92.8 63 76.2
Glyma.15G056700 Glycine max HOM05D001755 ORTHO05D001665 1.7e-17 92.8 66 74.2
Sc26g0000250 Simmondsia chinensis HOM05D001755 ORTHO05D001665 1.7e-17 92.8 66 72.7
Potri.017G047932 Populus trichocarpa HOM05D001755 ORTHO05D001665 2.2e-17 92.4 66 72.7
Sed0014860 Sechium edule HOM05D001755 ORTHO05D001665 2.2e-17 92.4 66 74.2
Actinidia33109 Actinidia chinensis HOM05D001755 ORTHO05D001665 2.9e-17 92.0 63 77.8
EL10Ac1g01104 Beta vulgaris HOM05D001755 ORTHO05D001665 2.9e-17 92.0 65 72.3
HanXRQChr05g0163291 Helianthus annuus HOM05D001755 ORTHO05D001665 2.9e-17 92.0 66 72.7
HanXRQChr05g0163551 Helianthus annuus HOM05D001755 ORTHO05D001665 2.9e-17 92.0 66 72.7
Phvul.006G203500 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 2.9e-17 92.0 66 72.7
Manes.10G102000 Manihot esculenta HOM05D001755 ORTHO05D001665 3.7e-17 91.7 66 72.7
Manes.07G036900 Manihot esculenta HOM05D001755 ORTHO05D001665 4.9e-17 91.3 66 71.2
Glyma.07G181100 Glycine max HOM05D001755 ORTHO05D001665 6.4e-17 90.9 66 74.2
Migut.L01932 Erythranthe guttata HOM05D001755 ORTHO05D001665 8.3e-17 90.5 66 72.7
Glyma.08G069600 Glycine max HOM05D001755 ORTHO05D001665 8.3e-17 90.5 66 74.2
Phvul.002G211300 Phaseolus vulgaris HOM05D001755 ORTHO05D001665 8.3e-17 90.5 66 74.2
vmacro19953 Vaccinium macrocarpon HOM05D001755 ORTHO05D001665 8.3e-17 90.5 63 76.2
Migut.B00565 Erythranthe guttata HOM05D001755 ORTHO05D001665 1.1e-16 90.1 66 71.2
MD04G1047500 Malus domestica HOM05D001755 ORTHO05D001665 1.4e-16 89.7 66 69.7
arahy.Tifrunner.gnm1.ann1.ZL8253 Arachis hypogaea HOM05D001755 ORTHO05D001665 1.9e-16 89.4 65 69.2
SGA_v2.0_scaffold145G36024 Striga asiatica HOM05D001755 ORTHO05D001665 1.9e-16 89.4 65 69.2
SGA_v2.0_scaffold14G07146 Striga asiatica HOM05D001755 ORTHO05D001665 2.4e-16 89.0 65 70.8
LjContig00408g0004832 Lotus japonicus HOM05D001755 ORTHO05D001665 4.1e-16 88.2 66 69.7
Psat2g065840 Pisum sativum HOM05D001755 ORTHO05D001665 4.1e-16 88.2 66 69.7
CAN.G523.28 Capsicum annuum HOM05D001755 ORTHO05D001665 5.4e-16 87.8 66 71.2
Rhsim06G0074100 Rhododendron simsii HOM05D001755 ORTHO05D001665 5.4e-16 87.8 68 70.6
Lalb_Chr11g0065111 Lupinus albus HOM05D001755 ORTHO05D001665 7.1e-16 87.4 66 69.7
TAR628G0605 Trochodendron aralioides HOM05D001755 ORTHO05D001665 7.1e-16 87.4 54 81.5
Actinidia25389 Actinidia chinensis HOM05D001755 ORTHO05D001665 9.2e-16 87.0 47 87.2
Lj1g0001104 Lotus japonicus HOM05D001755 ORTHO05D001665 9.2e-16 87.0 66 68.2
Lalb_Chr08g0242371 Lupinus albus HOM05D001755 ORTHO05D001665 1.2e-15 86.7 66 68.2
Lalb_Chr04g0252981 Lupinus albus HOM05D001755 ORTHO05D001665 1.6e-15 86.3 66 66.7
Medtr5g065670 Medicago truncatula HOM05D001755 ORTHO05D001665 1.6e-15 86.3 65 69.2
MBI06_g42716_MAGBIO Magnolia biondii HOM05D001755 ORTHO05D001665 2.1e-15 85.9 52 80.8
Ciclev10006528m.g Citrus clementina HOM05D001755 ORTHO05D001665 3.5e-15 85.1 66 66.7
Sed0003373 Sechium edule HOM05D001755 ORTHO05D001665 3.5e-15 85.1 66 68.2
Solyc01g105700.3 Solanum lycopersicum HOM05D001755 ORTHO05D001665 6.0e-15 84.3 66 68.2
COL.COLO4_35196 Corchorus olitorius HOM05D001755 ORTHO05D001665 7.8e-15 84.0 43 90.7
Aqoxy6G01463 Aquilegia oxysepala HOM05D001755 ORTHO05D001665 1.3e-14 83.2 48 83.3
Lalb_Chr17g0344421 Lupinus albus HOM05D001755 ORTHO05D001665 1.3e-14 83.2 66 69.7
Hund16874 Selenicereus undatus HOM05D001755 ORTHO05D001665 1.3e-14 83.2 65 64.6
Lj4g0016585 Lotus japonicus HOM05D001755 ORTHO05D001665 3.0e-14 82.0 66 66.7
Nitab4.5_0002650g0060 Nicotiana tabacum HOM05D001755 ORTHO05D001665 3.9e-14 81.6 55 74.5
Cpa.g.c31184 Carica papaya HOM05D001755 ORTHO05D001665 5.1e-14 81.3 41 92.7
CDE10G0928 Ceratophyllum demersum HOM05D001755 ORTHO05D001665 5.1e-14 81.3 65 63.1
arahy.Tifrunner.gnm1.ann1.0E4ZKW Arachis hypogaea HOM05D001755 ORTHO05D001665 1.1e-13 80.1 45 80.0
Duzib041G0605 Durio zibethinus HOM05D001755 ORTHO05D001665 1.1e-13 80.1 41 90.2
Lalb_Chr05g0217661 Lupinus albus HOM05D001755 ORTHO05D001665 1.1e-13 80.1 66 66.7
VMungo1309G0268 Vigna mungo HOM05D001755 ORTHO05D001665 1.5e-13 79.7 41 90.2
DCAR_029187 Daucus carota HOM05D001755 ORTHO05D001665 1.9e-13 79.3 66 66.7
MELO3C018591.2 Cucumis melo HOM05D001755 ORTHO05D001665 2.5e-13 79.0 61 65.6
FAN13G1260 Fragaria x ananassa HOM05D001755 ORTHO05D001665 2.5e-13 79.0 43 86.0
AUR62019010 Chenopodium quinoa HOM05D001755 ORTHO05D001665 5.6e-13 77.8 41 87.8
VMungo0540G1031 Vigna mungo HOM05D001755 ORTHO05D001665 5.6e-13 77.8 42 85.7
Aa31sc34G40 Aethionema arabicum HOM05D001755 ORTHO05D001665 7.3e-13 77.4 44 77.3
BcaC03g18258 Brassica carinata HOM05D001755 ORTHO05D001665 1.2e-12 76.6 66 60.6
Duzib052G1081 Durio zibethinus HOM05D001755 ORTHO05D001665 1.2e-12 76.6 69 58.0
BraA02t09253Z Brassica rapa HOM05D001755 ORTHO05D001665 1.6e-12 76.3 66 59.1
arahy.Tifrunner.gnm1.ann1.FV0XI2 Arachis hypogaea HOM05D001755 ORTHO05D001665 4.7e-12 74.7 41 82.9
Oeu060039.1 Olea europaea HOM05D001755 ORTHO05D001665 4.7e-12 74.7 64 65.6
Aa31LG1G17560 Aethionema arabicum HOM05D001755 ORTHO05D001665 6.2e-12 74.3 65 58.5
Thhalv10005432m.g Eutrema salsugineum HOM05D001755 ORTHO05D001665 6.2e-12 74.3 66 59.1
Carub.0008s0991 Capsella rubella HOM05D001755 ORTHO05D001665 1.1e-11 73.6 66 63.6
VMungo0251G2544 Vigna mungo HOM05D001755 ORTHO05D001665 1.1e-11 73.6 41 87.8
AUR62027851 Chenopodium quinoa HOM05D001755 ORTHO05D001665 1.4e-11 73.2 44 79.5
Carub.0008s2514 Capsella rubella HOM05D001755 ORTHO05D001665 2.3e-11 72.4 66 56.1
Ciclev10003720m.g Citrus clementina HOM05D001755 ORTHO05D001665 5.2e-11 71.2 41 80.5
CARHR278280 Cardamine hirsuta HOM05D001755 ORTHO05D001665 6.8e-11 70.9 66 54.5
Thhalv10015558m.g Eutrema salsugineum HOM05D001755 ORTHO05D001665 6.8e-11 70.9 67 56.7
FAN18G3889 Fragaria x ananassa HOM05D001755 ORTHO05D001665 6.8e-11 70.9 36 88.9
Carub.0006s0803 Capsella rubella HOM05D001755 ORTHO05D001665 8.9e-11 70.5 67 56.7
CARHR203920 Cardamine hirsuta HOM05D001755 ORTHO05D001665 8.9e-11 70.5 67 56.7
BcaC01g06905 Brassica carinata HOM05D001755 ORTHO05D001665 3.4e-10 68.6 63 55.6
C03p61950 Brassica napus HOM05D001755 ORTHO05D001665 3.4e-10 68.6 63 55.6
BolC3t18454H Brassica oleracea HOM05D001755 ORTHO05D001665 3.4e-10 68.6 63 55.6
Sabra17G0032400 Salix brachista HOM05D001755 ORTHO05D001665 3.8e-09 65.1 41 75.6
BraA10t44831Z Brassica rapa HOM05D001755 ORTHO05D001665 2.4e-08 62.4 66 48.5
BcaB08g37202 Brassica carinata HOM05D001755 ORTHO05D001665 7.1e-08 60.8 65 47.7
BolC9t59551H Brassica oleracea HOM05D001755 ORTHO05D001665 7.1e-08 60.8 65 47.7
Aa31LG3G17530 Aethionema arabicum HOM05D001755 ORTHO05D001665 1.2e-07 60.1 46 58.7
BcaB07g29738 Brassica carinata HOM05D001755 ORTHO05D001665 1.2e-07 60.1 41 63.4
CDE10G0731 Ceratophyllum demersum HOM05D001755 ORTHO05D001665 1.6e-07 59.7 60 46.7
unitig_62.g23628 Utricularia gibba HOM05D001755 ORTHO05D001665 1.7e-06 56.2 41 58.5


User provided reference genes

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