Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0016033 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.1e-59 233.0 117 100.0
CSS0017802 Camellia sinensis var. sinensis HOM05D006413 ORTHO05D007722 1.1e-59 233.0 117 100.0
Dinv34265 Davidia involucrata HOM05D006413 ORTHO05D007722 3.5e-24 115.2 63 90.5
Rhsim01G0182400 Rhododendron simsii HOM05D006413 ORTHO05D007722 6.0e-24 114.4 63 88.9
Actinidia28080 Actinidia chinensis HOM05D006413 ORTHO05D007722 1.3e-23 113.2 62 90.3
Atru.chr5.817 Acer truncatum HOM05D006413 ORTHO05D007722 1.7e-23 112.8 63 87.3
TWI14G0709 Tripterygium wilfordii HOM05D006413 ORTHO05D007722 1.7e-23 112.8 62 90.3
vmacro12628 Vaccinium macrocarpon HOM05D006413 ORTHO05D007722 1.7e-23 112.8 63 88.9
FvH4_6g36970 Fragaria vesca HOM05D006413 ORTHO05D007722 3.9e-23 111.7 68 80.9
FAN02G2312 Fragaria x ananassa HOM05D006413 ORTHO05D007722 3.9e-23 111.7 68 80.9
FAN09G4880 Fragaria x ananassa HOM05D006413 ORTHO05D007722 3.9e-23 111.7 68 80.9
GSVIVG01027488001 Vitis vinifera HOM05D006413 ORTHO05D007722 6.6e-23 110.9 62 87.1
FAN14G2652 Fragaria x ananassa HOM05D006413 ORTHO05D007722 8.6e-23 110.5 68 79.4
RcHm_v2.0_Chr2g0149491 Rosa chinensis HOM05D006413 ORTHO05D007722 1.5e-22 109.8 68 79.4
ClCG09G001640 Citrullus lanatus HOM05D006413 ORTHO05D007722 1.9e-22 109.4 67 79.1
Manes.01G237000 Manihot esculenta HOM05D006413 ORTHO05D007722 1.9e-22 109.4 62 87.1
QL05p084380 Quercus lobata HOM05D006413 ORTHO05D007722 1.9e-22 109.4 61 88.5
MELO3C024283.2 Cucumis melo HOM05D006413 ORTHO05D007722 3.3e-22 108.6 67 79.1
CsaV3_7G033700 Cucumis sativus L. HOM05D006413 ORTHO05D007722 3.3e-22 108.6 67 79.1
CANSAT01G2278 Cannabis sativa HOM05D006413 ORTHO05D007722 5.6e-22 107.8 64 84.4
CiPaw.02G050700 Carya illinoinensis HOM05D006413 ORTHO05D007722 5.6e-22 107.8 61 85.2
Lj3g0007654 Lotus japonicus HOM05D006413 ORTHO05D007722 5.6e-22 107.8 61 88.5
Lj5g0015604 Lotus japonicus HOM05D006413 ORTHO05D007722 5.6e-22 107.8 61 88.5
Sed0002155 Sechium edule HOM05D006413 ORTHO05D007722 9.5e-22 107.1 69 75.4
TAR629G2159 Trochodendron aralioides HOM05D006413 ORTHO05D007722 9.5e-22 107.1 64 79.7
Cfa002153 Carpinus fangiana HOM05D006413 ORTHO05D007722 1.2e-21 106.7 61 85.2
MD05G1207200 Malus domestica HOM05D006413 ORTHO05D007722 1.6e-21 106.3 73 74.0
Glyma.13G372900 Glycine max HOM05D006413 ORTHO05D007722 2.1e-21 105.9 61 85.2
THA.LOC104802107 Tarenaya hassleriana HOM05D006413 ORTHO05D007722 2.1e-21 105.9 74 74.3
Thecc.01G329000 Theobroma cacao HOM05D006413 ORTHO05D007722 2.1e-21 105.9 62 83.9
Glyma.19G019600 Glycine max HOM05D006413 ORTHO05D007722 2.8e-21 105.5 61 83.6
Prupe.3G022900 Prunus persica HOM05D006413 ORTHO05D007722 2.8e-21 105.5 68 75.0
Lj9A544G35 Lonicera japonica HOM05D006413 ORTHO05D007722 3.6e-21 105.1 60 88.3
Duzib138G1460 Durio zibethinus HOM05D006413 ORTHO05D007722 6.2e-21 104.4 62 82.3
MD17G1162400 Malus domestica HOM05D006413 ORTHO05D007722 6.2e-21 104.4 68 76.5
Sabra02G0131800 Salix brachista HOM05D006413 ORTHO05D007722 6.2e-21 104.4 62 83.9
DCAR_001546 Daucus carota HOM05D006413 ORTHO05D007722 8.0e-21 104.0 62 79.0
Gohir.D12G122400 Gossypium hirsutum HOM05D006413 ORTHO05D007722 8.0e-21 104.0 66 77.3
Gorai.008G133200 Gossypium raimondii HOM05D006413 ORTHO05D007722 8.0e-21 104.0 66 77.3
Potri.002G183900 Populus trichocarpa HOM05D006413 ORTHO05D007722 8.0e-21 104.0 62 82.3
arahy.Tifrunner.gnm1.ann1.JWHJ24 Arachis hypogaea HOM05D006413 ORTHO05D007722 1.1e-20 103.6 63 82.5
EL10Ac1g00655 Beta vulgaris HOM05D006413 ORTHO05D007722 1.1e-20 103.6 61 83.6
CDE12G0027 Ceratophyllum demersum HOM05D006413 ORTHO05D007722 1.1e-20 103.6 63 81.0
MBI12_g23070_MAGBIO Magnolia biondii HOM05D006413 ORTHO05D007722 1.1e-20 103.6 76 69.7
Thhalv10001331m.g Eutrema salsugineum HOM05D006413 ORTHO05D007722 1.4e-20 103.2 74 70.3
COL.COLO4_23085 Corchorus olitorius HOM05D006413 ORTHO05D007722 1.8e-20 102.8 62 80.6
HanXRQChr12g0379901 Helianthus annuus HOM05D006413 ORTHO05D007722 1.8e-20 102.8 66 78.8
Lsat_1_v5_gn_5_42660 Lactuca sativa HOM05D006413 ORTHO05D007722 1.8e-20 102.8 61 80.3
Eucgr.E00011 Eucalyptus grandis HOM05D006413 ORTHO05D007722 2.3e-20 102.4 61 82.0
Medtr2g101420 Medicago truncatula HOM05D006413 ORTHO05D007722 2.3e-20 102.4 61 82.0
Ah.05g177080 Amaranthus hybridus HOM05D006413 ORTHO05D007722 3.1e-20 102.1 60 83.3
Ca_00994_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 3.1e-20 102.1 63 81.0
Ca_30995_v3 Cicer arietinum L. HOM05D006413 ORTHO05D007722 3.1e-20 102.1 63 81.0
Aqoxy5G04399 Aquilegia oxysepala HOM05D006413 ORTHO05D007722 4.0e-20 101.7 61 78.7
AT2G46915 Arabidopsis thaliana HOM05D006413 ORTHO05D007722 5.2e-20 101.3 74 68.9
AUR62014504 Chenopodium quinoa HOM05D006413 ORTHO05D007722 5.2e-20 101.3 61 82.0
AUR62038031 Chenopodium quinoa HOM05D006413 ORTHO05D007722 5.2e-20 101.3 61 82.0
Gohir.A12G118600 Gossypium hirsutum HOM05D006413 ORTHO05D007722 5.2e-20 101.3 66 75.8
PSO782G4045 Papaver somniferum HOM05D006413 ORTHO05D007722 5.2e-20 101.3 63 74.6
Sc26g0002030 Simmondsia chinensis HOM05D006413 ORTHO05D007722 5.2e-20 101.3 61 75.4
Cpa.g.sc57.58 Carica papaya HOM05D006413 ORTHO05D007722 6.8e-20 100.9 62 80.6
ECA246G2509 Erigeron canadensis HOM05D006413 ORTHO05D007722 6.8e-20 100.9 60 81.7
Sp4g28940 Schrenkiella parvula HOM05D006413 ORTHO05D007722 6.8e-20 100.9 74 68.9
AL4G46380 Arabidopsis lyrata HOM05D006413 ORTHO05D007722 8.9e-20 100.5 74 68.9
Phvul.005G185400 Phaseolus vulgaris HOM05D006413 ORTHO05D007722 8.9e-20 100.5 61 80.3
Psat5g305280 Pisum sativum HOM05D006413 ORTHO05D007722 8.9e-20 100.5 63 76.2
TPR.G31784 Trifolium pratense HOM05D006413 ORTHO05D007722 1.2e-19 100.1 61 78.7
VMungo1080G0934 Vigna mungo HOM05D006413 ORTHO05D007722 1.2e-19 100.1 61 80.3
ATR0579G084 Amborella trichopoda HOM05D006413 ORTHO05D007722 1.5e-19 99.8 62 79.0
CARHR142270 Cardamine hirsuta HOM05D006413 ORTHO05D007722 1.5e-19 99.8 59 81.4
Cc11_g00050 Coffea canephora HOM05D006413 ORTHO05D007722 1.5e-19 99.8 60 80.0
Aa31LG1G28280 Aethionema arabicum HOM05D006413 ORTHO05D007722 2.0e-19 99.4 59 81.4
Carub.0004s2964 Capsella rubella HOM05D006413 ORTHO05D007722 2.0e-19 99.4 74 67.6
Oeu059793.1 Olea europaea HOM05D006413 ORTHO05D007722 2.0e-19 99.4 63 76.2
Os06g0104000 Oryza sativa ssp. japonica HOM05D006413 ORTHO05D007722 2.6e-19 99.0 61 77.0
PSO063G3388 Papaver somniferum HOM05D006413 ORTHO05D007722 3.4e-19 98.6 61 77.0
Psat2g176480 Pisum sativum HOM05D006413 ORTHO05D007722 3.4e-19 98.6 63 76.2
BcaC02g12635 Brassica carinata HOM05D006413 ORTHO05D007722 7.5e-19 97.4 74 66.2
C04p01070 Brassica napus HOM05D006413 ORTHO05D007722 9.8e-19 97.1 74 66.2
BolC4t21760H Brassica oleracea HOM05D006413 ORTHO05D007722 9.8e-19 97.1 74 66.2
Hund26914 Selenicereus undatus HOM05D006413 ORTHO05D007722 9.8e-19 97.1 63 74.6
Zm00001eb268520 Zea mays HOM05D006413 ORTHO05D007722 1.3e-18 96.7 62 74.2
Migut.G00788 Erythranthe guttata HOM05D006413 ORTHO05D007722 1.7e-18 96.3 61 75.4
A05p00920 Brassica napus HOM05D006413 ORTHO05D007722 2.2e-18 95.9 74 64.9
BraA05t19093Z Brassica rapa HOM05D006413 ORTHO05D007722 2.2e-18 95.9 74 64.9
SGA_v2.0_scaffold12G06253 Striga asiatica HOM05D006413 ORTHO05D007722 2.2e-18 95.9 59 78.0
Sopen03g012060 Solanum pennellii HOM05D006413 ORTHO05D007722 6.4e-18 94.4 62 74.2
Nn1g00502 Nelumbo nucifera HOM05D006413 ORTHO05D007722 8.3e-18 94.0 61 72.1
PGR042G2300 Punica granatum HOM05D006413 ORTHO05D007722 8.3e-18 94.0 104 51.9
Lalb_Chr24g0392741 Lupinus albus HOM05D006413 ORTHO05D007722 1.1e-17 93.6 57 80.7
CAN.G317.7 Capsicum annuum HOM05D006413 ORTHO05D007722 3.2e-17 92.0 62 74.2
MSTRG.12126 Avicennia marina HOM05D006413 ORTHO05D007722 7.0e-17 90.9 65 67.7
HPP92_025405 Vanilla planifolia HOM05D006413 ORTHO05D007722 7.0e-17 90.9 72 65.3
Psat5g292640 Pisum sativum HOM05D006413 ORTHO05D007722 1.0e-15 87.0 58 69.0
Nitab4.5_0000911g0040 Nicotiana tabacum HOM05D006413 ORTHO05D007722 1.7e-15 86.3 56 76.8
Mapoly0083s0051 Marchantia polymorpha HOM05D006413 ORTHO05D007722 3.9e-15 85.1 62 67.7
Glyma.15G001000 Glycine max HOM05D006413 ORTHO05D007722 5.1e-15 84.7 48 87.5
SEGI_13405 Sequoiadendron giganteum HOM05D006413 ORTHO05D007722 1.1e-14 83.6 60 66.7
Solyc03g058437.1 Solanum lycopersicum HOM05D006413 ORTHO05D007722 5.2e-12 74.7 46 80.4
SMO358G0223 Selaginella moellendorffii HOM05D006413 ORTHO05D007722 7.5e-11 70.9 53 66.0
Pp3c4_17360 Physcomitrium patens HOM05D006413 ORTHO05D007722 1.7e-10 69.7 54 63.0


User provided reference genes

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