Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015996 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 4.6e-74 281.2 146 100.0
vmacro20696 Vaccinium macrocarpon HOM05D007950 ORTHO05D009951 3.9e-25 118.6 79 74.7
MD15G1186200 Malus domestica HOM05D007950 ORTHO05D009951 1.5e-24 116.7 68 83.8
GSVIVG01015395001 Vitis vinifera HOM05D007950 ORTHO05D009951 2.0e-24 116.3 138 55.1
Thecc.09G111000 Theobroma cacao HOM05D007950 ORTHO05D009951 3.3e-24 115.5 68 85.3
Eucgr.C01044 Eucalyptus grandis HOM05D007950 ORTHO05D009951 9.7e-24 114.0 71 76.1
RcHm_v2.0_Chr2g0090511 Rosa chinensis HOM05D007950 ORTHO05D009951 2.2e-23 112.8 68 80.9
FAN19G2230 Fragaria x ananassa HOM05D007950 ORTHO05D009951 2.8e-23 112.5 101 64.4
QL02p085472 Quercus lobata HOM05D007950 ORTHO05D009951 2.8e-23 112.5 68 76.5
FvH4_1g04841 Fragaria vesca HOM05D007950 ORTHO05D009951 1.1e-22 110.5 68 77.9
MD02G1047700 Malus domestica HOM05D007950 ORTHO05D009951 1.1e-22 110.5 68 79.4
FAN26G3407 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-22 110.2 68 77.9
FAN23G0617 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.8e-22 109.8 86 69.8
Actinidia20354 Actinidia chinensis HOM05D007950 ORTHO05D009951 5.3e-22 108.2 67 77.6
Manes.16G116501 Manihot esculenta HOM05D007950 ORTHO05D009951 5.3e-22 108.2 67 76.1
Prupe.7G230500 Prunus persica HOM05D007950 ORTHO05D009951 7.0e-22 107.8 60 85.0
Gohir.D06G060600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.5e-21 106.7 67 79.1
Gorai.010G070600 Gossypium raimondii HOM05D007950 ORTHO05D009951 1.5e-21 106.7 67 79.1
CsaV3_1G030490 Cucumis sativus L. HOM05D007950 ORTHO05D009951 2.0e-21 106.3 68 70.6
Gohir.A06G062300 Gossypium hirsutum HOM05D007950 ORTHO05D009951 2.0e-21 106.3 67 77.6
CiPaw.03G232500 Carya illinoinensis HOM05D007950 ORTHO05D009951 2.6e-21 105.9 68 77.9
arahy.Tifrunner.gnm1.ann1.7G47EE Arachis hypogaea HOM05D007950 ORTHO05D009951 3.4e-21 105.5 66 77.3
arahy.Tifrunner.gnm1.ann1.U6R6BR Arachis hypogaea HOM05D007950 ORTHO05D009951 3.4e-21 105.5 66 77.3
TAR636G2963 Trochodendron aralioides HOM05D007950 ORTHO05D009951 3.4e-21 105.5 100 62.0
CiPaw.04G164400 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.3e-20 103.6 60 81.7
Phvul.003G020900 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 1.3e-20 103.6 68 75.0
ClCG06G008510 Citrullus lanatus HOM05D007950 ORTHO05D009951 1.7e-20 103.2 70 67.1
Ciclev10010772m.g Citrus clementina HOM05D007950 ORTHO05D009951 5.0e-20 101.7 77 64.9
Psat1g042280 Pisum sativum HOM05D007950 ORTHO05D009951 1.1e-19 100.5 68 72.1
PGR102G0372 Punica granatum HOM05D007950 ORTHO05D009951 5.5e-19 98.2 86 59.3
Nn8g39199 Nelumbo nucifera HOM05D007950 ORTHO05D009951 4.7e-18 95.1 68 67.6
QL05p023317 Quercus lobata HOM05D007950 ORTHO05D009951 6.1e-18 94.7 68 64.7
TPR.G35274 Trifolium pratense HOM05D007950 ORTHO05D009951 6.1e-18 94.7 68 69.1
Potri.001G181701 Populus trichocarpa HOM05D007950 ORTHO05D009951 1.8e-17 93.2 66 69.7
CSS0032282 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 3.0e-17 92.4 67 70.1
CSS0048253 Camellia sinensis var. sinensis HOM05D007950 ORTHO05D009951 3.0e-17 92.4 66 71.2
Thecc.06G089600 Theobroma cacao HOM05D007950 ORTHO05D009951 6.7e-17 91.3 67 68.7
Glyma.09G123700 Glycine max HOM05D007950 ORTHO05D009951 8.8e-17 90.9 68 72.1
CiPaw.02G150700 Carya illinoinensis HOM05D007950 ORTHO05D009951 1.1e-16 90.5 62 71.0
Gohir.D05G129500 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.1e-16 90.5 67 68.7
Manes.03G020101 Manihot esculenta HOM05D007950 ORTHO05D009951 2.0e-16 89.7 67 70.1
Medtr6g086645 Medicago truncatula HOM05D007950 ORTHO05D009951 2.0e-16 89.7 67 68.7
Nn2g11757 Nelumbo nucifera HOM05D007950 ORTHO05D009951 2.6e-16 89.4 67 62.7
Gohir.A05G130600 Gossypium hirsutum HOM05D007950 ORTHO05D009951 3.3e-16 89.0 67 67.2
Eucgr.J02984 Eucalyptus grandis HOM05D007950 ORTHO05D009951 5.7e-16 88.2 60 66.7
Manes.11G045700 Manihot esculenta HOM05D007950 ORTHO05D009951 1.3e-15 87.0 100 51.0
Gohir.D03G063400 Gossypium hirsutum HOM05D007950 ORTHO05D009951 4.8e-15 85.1 68 61.8
Gorai.002G059800 Gossypium raimondii HOM05D007950 ORTHO05D009951 4.8e-15 85.1 68 61.8
Sc10g0007380 Simmondsia chinensis HOM05D007950 ORTHO05D009951 4.8e-15 85.1 67 62.7
ATR0980G014 Amborella trichopoda HOM05D007950 ORTHO05D009951 8.2e-15 84.3 68 58.8
Gohir.1Z049586 Gossypium hirsutum HOM05D007950 ORTHO05D009951 1.8e-14 83.2 68 60.3
Cc06_g09630 Coffea canephora HOM05D007950 ORTHO05D009951 7.0e-14 81.3 61 67.2
Potri.003G054001 Populus trichocarpa HOM05D007950 ORTHO05D009951 5.9e-13 78.2 61 65.6
Haze_16407 Corylus avellana HOM05D007950 ORTHO05D009951 7.7e-13 77.8 64 57.8
Haze_16408 Corylus avellana HOM05D007950 ORTHO05D009951 7.7e-13 77.8 64 57.8
Medtr4g012610 Medicago truncatula HOM05D007950 ORTHO05D009951 7.7e-13 77.8 67 56.7
Lj3g0016273 Lotus japonicus HOM05D007950 ORTHO05D009951 1.3e-12 77.0 64 57.8
TPR.G24171 Trifolium pratense HOM05D007950 ORTHO05D009951 3.8e-12 75.5 64 57.8
Sc08g0007460 Simmondsia chinensis HOM05D007950 ORTHO05D009951 5.0e-12 75.1 71 54.9
SalBow2G2396 Salvia bowleyana HOM05D007950 ORTHO05D009951 6.5e-12 74.7 52 63.5
Medtr4g012580 Medicago truncatula HOM05D007950 ORTHO05D009951 8.5e-12 74.3 64 56.2
Psat7g251240 Pisum sativum HOM05D007950 ORTHO05D009951 1.1e-11 73.9 67 53.7
Lalb_Chr04g0262731 Lupinus albus HOM05D007950 ORTHO05D009951 1.5e-11 73.6 63 54.0
Prupe.3G070100 Prunus persica HOM05D007950 ORTHO05D009951 1.9e-11 73.2 72 61.1
Lsat_1_v5_gn_5_103401 Lactuca sativa HOM05D007950 ORTHO05D009951 9.4e-11 70.9 90 44.4
Cc04_g03310 Coffea canephora HOM05D007950 ORTHO05D009951 2.1e-10 69.7 85 45.9
Glyma.08G206200 Glycine max HOM05D007950 ORTHO05D009951 2.7e-10 69.3 64 54.7
Sed0000041 Sechium edule HOM05D007950 ORTHO05D009951 2.7e-10 69.3 59 50.8
arahy.Tifrunner.gnm1.ann1.6Z76EK Arachis hypogaea HOM05D007950 ORTHO05D009951 4.7e-10 68.6 69 53.6
Migut.D01581 Erythranthe guttata HOM05D007950 ORTHO05D009951 6.1e-10 68.2 64 48.4
CDE06G0019 Ceratophyllum demersum HOM05D007950 ORTHO05D009951 8.0e-10 67.8 65 49.2
Dinv36624 Davidia involucrata HOM05D007950 ORTHO05D009951 1.0e-09 67.4 67 55.2
FAN05G0591 Fragaria x ananassa HOM05D007950 ORTHO05D009951 1.4e-09 67.0 70 48.6
FAN14G2438 Fragaria x ananassa HOM05D007950 ORTHO05D009951 3.0e-09 65.9 70 48.6
Glyma.07G005901 Glycine max HOM05D000325 ORTHO05D002025 4.0e-09 65.5 63 54.0
TPR.G8534 Trifolium pratense HOM05D007950 ORTHO05D009951 5.2e-09 65.1 64 48.4
Medtr6g086730 Medicago truncatula HOM05D007950 ORTHO05D009951 6.7e-09 64.7 50 66.0
Phvul.010G150100 Phaseolus vulgaris HOM05D007950 ORTHO05D009951 4.4e-08 62.0 63 46.0
Thhalv10012203m.g Eutrema salsugineum HOM05D007950 ORTHO05D009951 1.4e-06 57.0 62 41.9
HanXRQChr09g0275201 Helianthus annuus HOM05D007950 ORTHO05D009951 3.1e-06 55.8 68 36.8


User provided reference genes

Program Settings