Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015985 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.1e-85 318.9 155 100.0
CSS0029311 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.1e-85 318.9 155 100.0
CSS0046301 Camellia sinensis var. sinensis HOM05D005753 ORTHO05D007034 2.8e-53 212.2 162 72.2
Dinv22267 Davidia involucrata HOM05D005753 ORTHO05D007034 1.7e-50 203.0 147 72.1
RhsimUnG0251100 Rhododendron simsii HOM05D005753 ORTHO05D007034 7.8e-48 194.1 149 70.5
Actinidia35339 Actinidia chinensis HOM05D005753 ORTHO05D007034 3.0e-47 192.2 151 66.9
vmacro09719 Vaccinium macrocarpon HOM05D005753 ORTHO05D007034 2.1e-45 186.0 149 67.1
TAR629G3535 Trochodendron aralioides HOM05D005753 ORTHO05D007034 4.0e-44 181.8 152 65.1
Actinidia10731 Actinidia chinensis HOM05D005753 ORTHO05D007034 9.0e-44 180.6 128 72.7
GSVIVG01037637001 Vitis vinifera HOM05D005753 ORTHO05D007034 4.2e-41 171.8 151 60.9
Nn1g03551 Nelumbo nucifera HOM05D005753 ORTHO05D007034 2.5e-38 162.5 152 57.9
QL08p010535 Quercus lobata HOM05D005753 ORTHO05D007034 7.3e-38 161.0 148 56.8
Dinv40749 Davidia involucrata HOM05D005753 ORTHO05D007034 8.1e-37 157.5 148 61.5
Potri.001G423200 Populus trichocarpa HOM05D005753 ORTHO05D007034 5.3e-36 154.8 151 54.3
Thecc.07G038900 Theobroma cacao HOM05D005753 ORTHO05D007034 1.5e-35 153.3 148 58.8
Duzib213G1063 Durio zibethinus HOM05D005753 ORTHO05D007034 4.5e-35 151.8 151 57.6
Peaxi162Scf00964g00029 Petunia axillaris HOM05D005753 ORTHO05D007034 5.8e-35 151.4 146 57.5
TWI38G0917 Tripterygium wilfordii HOM05D005753 ORTHO05D007034 9.9e-35 150.6 148 53.4
Potri.011G138600 Populus trichocarpa HOM05D005753 ORTHO05D007034 4.9e-34 148.3 150 53.3
PGSC0003DMG400022322 Solanum tuberosum HOM05D005753 ORTHO05D007034 8.4e-34 147.5 151 53.6
Haze_09667 Corylus avellana HOM05D005753 ORTHO05D007034 2.4e-33 146.0 148 55.4
Nitab4.5_0001913g0030 Nicotiana tabacum HOM05D005753 ORTHO05D007034 4.2e-33 145.2 144 55.6
Manes.15G072600 Manihot esculenta HOM05D005753 ORTHO05D007034 7.1e-33 144.4 143 54.5
Migut.M01771 Erythranthe guttata HOM05D005753 ORTHO05D007034 1.0e-31 140.6 146 50.0
TWI38G1056 Tripterygium wilfordii HOM05D005753 ORTHO05D007034 1.3e-31 140.2 148 50.7
Sopen07g032730 Solanum pennellii HOM05D005753 ORTHO05D007034 2.3e-31 139.4 152 52.0
Solyc07g064550.3 Solanum lycopersicum HOM05D005753 ORTHO05D007034 5.1e-31 138.3 152 51.3
Ciclev10007877m.g Citrus clementina HOM05D005753 ORTHO05D007034 6.7e-31 137.9 152 54.6
COL.COLO4_09655 Corchorus olitorius HOM05D005753 ORTHO05D007034 8.7e-31 137.5 146 54.8
Gohir.D05G369100 Gossypium hirsutum HOM05D005753 ORTHO05D007034 8.7e-31 137.5 151 52.3
Gorai.009G437800 Gossypium raimondii HOM05D005753 ORTHO05D007034 8.7e-31 137.5 151 52.3
Sabra16G0289400 Salix brachista HOM05D005753 ORTHO05D007034 2.5e-30 136.0 153 48.4
Atru.chr2.3344 Acer truncatum HOM05D005753 ORTHO05D007034 5.6e-30 134.8 150 50.0
Cc05_g13740 Coffea canephora HOM05D005753 ORTHO05D007034 9.6e-30 134.0 146 52.7
DCAR_022557 Daucus carota HOM05D005753 ORTHO05D007034 9.6e-30 134.0 149 52.3
Cfa020355 Carpinus fangiana HOM05D005753 ORTHO05D007034 1.3e-29 133.7 148 52.7
ECA236G0832 Erigeron canadensis HOM05D005753 ORTHO05D007034 1.3e-29 133.7 152 47.4
Gohir.A04G017100 Gossypium hirsutum HOM05D005753 ORTHO05D007034 1.3e-29 133.7 152 50.7
Lsat_1_v5_gn_7_108641 Lactuca sativa HOM05D005753 ORTHO05D007034 2.1e-29 132.9 151 45.7
Manes.03G128700 Manihot esculenta HOM05D005753 ORTHO05D007034 6.2e-29 131.3 144 50.7
CsaV3_3G005190 Cucumis sativus L. HOM05D005753 ORTHO05D007034 1.1e-28 130.6 148 48.0
Oeu007583.4 Olea europaea HOM05D005753 ORTHO05D007034 1.4e-28 130.2 146 54.1
ClCG10G005460 Citrullus lanatus HOM05D005753 ORTHO05D007034 1.8e-28 129.8 148 48.0
Aqoxy4G01822 Aquilegia oxysepala HOM05D005753 ORTHO05D007034 2.4e-28 129.4 146 50.7
MSTRG.15152 Avicennia marina HOM05D005753 ORTHO05D007034 6.9e-28 127.9 145 46.9
CANSAT78G0206 Cannabis sativa HOM05D005753 ORTHO05D007034 5.8e-27 124.8 146 50.0
MBI02_g22112_MAGBIO Magnolia biondii HOM05D005753 ORTHO05D007034 1.7e-26 123.2 121 52.1
Duzib170G0684 Durio zibethinus HOM05D005753 ORTHO05D007034 8.4e-26 120.9 151 49.0
CiPaw.11G188600 Carya illinoinensis HOM05D005753 ORTHO05D007034 1.4e-25 120.2 148 48.6
Prupe.4G211900 Prunus persica HOM05D005753 ORTHO05D007034 1.9e-25 119.8 130 51.5
MD03G1202100 Malus domestica HOM05D005753 ORTHO05D007034 4.2e-25 118.6 130 50.8
RcHm_v2.0_Chr5g0039281 Rosa chinensis HOM05D005753 ORTHO05D007034 4.2e-25 118.6 130 49.2
Sed0020363 Sechium edule HOM05D005753 ORTHO05D007034 7.1e-25 117.9 153 46.4
CAN.G337.126 Capsicum annuum HOM05D005753 ORTHO05D007034 1.2e-24 117.1 151 46.4
PSO832G3698 Papaver somniferum HOM05D005753 ORTHO05D007034 1.2e-24 117.1 138 47.8
Lj1A871G90 Lonicera japonica HOM05D005753 ORTHO05D007034 4.6e-24 115.2 88 64.8
FAN16G1141 Fragaria x ananassa HOM05D005753 ORTHO05D007034 3.9e-23 112.1 130 48.5
Glyma.18G099000 Glycine max HOM05D005753 ORTHO05D007034 3.9e-23 112.1 148 44.6
HanXRQChr16g0515041 Helianthus annuus HOM05D005753 ORTHO05D007034 3.9e-23 112.1 146 44.5
Ca_14723_v3 Cicer arietinum L. HOM05D005753 ORTHO05D007034 5.1e-23 111.7 148 46.6
Sabra11G0124200 Salix brachista HOM05D005753 ORTHO05D007034 8.7e-23 110.9 130 46.2
FvH4_3g22540 Fragaria vesca HOM05D005753 ORTHO05D007034 2.5e-22 109.4 130 47.7
FAN11G3996 Fragaria x ananassa HOM05D005753 ORTHO05D007034 2.5e-22 109.4 130 47.7
FAN21G2493 Fragaria x ananassa HOM05D005753 ORTHO05D007034 2.5e-22 109.4 130 47.7
FAN25G0533 Fragaria x ananassa HOM05D005753 ORTHO05D007034 3.3e-22 109.0 130 46.9
HanXRQChr15g0494351 Helianthus annuus HOM05D005753 ORTHO05D007034 3.3e-22 109.0 151 42.4
Nitab4.5_0003812g0080 Nicotiana tabacum HOM05D005753 ORTHO05D004173 9.6e-22 107.5 94 57.4
Sc07g0002780 Simmondsia chinensis HOM05D005753 ORTHO05D007034 1.3e-21 107.1 132 50.8
MELO3C025386.2 Cucumis melo HOM05D005753 ORTHO05D007034 4.8e-21 105.1 194 36.6
Lalb_Chr15g0081011 Lupinus albus HOM05D005753 ORTHO05D007034 2.4e-20 102.8 148 41.9
arahy.Tifrunner.gnm1.ann1.2B36BL Arachis hypogaea HOM05D005753 ORTHO05D007034 1.2e-19 100.5 149 40.9
arahy.Tifrunner.gnm1.ann1.F03U7D Arachis hypogaea HOM05D005753 ORTHO05D007034 1.2e-19 100.5 149 40.9
AUR62015759 Chenopodium quinoa HOM05D005753 ORTHO05D007034 1.2e-19 100.5 149 40.3
THA.LOC104818102 Tarenaya hassleriana HOM05D005753 ORTHO05D007034 1.2e-19 100.5 151 41.1
Aa31LG5G10420 Aethionema arabicum HOM05D005753 ORTHO05D007034 2.6e-19 99.4 142 43.0
ATR0752G139 Amborella trichopoda HOM05D005753 ORTHO05D007034 4.5e-19 98.6 134 45.5
Cpa.g.sc97.11 Carica papaya HOM05D005753 ORTHO05D007034 2.2e-18 96.3 153 39.9
AL8G30390 Arabidopsis lyrata HOM05D005753 ORTHO05D007034 8.4e-18 94.4 139 41.7
CDE02G1816 Ceratophyllum demersum HOM05D005753 ORTHO05D007034 7.1e-17 91.3 146 39.0
CARHR234600 Cardamine hirsuta HOM05D005753 ORTHO05D007034 9.3e-17 90.9 142 41.5
PSO210G3457 Papaver somniferum HOM05D005753 ORTHO05D007034 1.2e-16 90.5 109 46.8
Thhalv10025144m.g Eutrema salsugineum HOM05D005753 ORTHO05D007034 7.9e-16 87.8 142 39.4
AT5G54920 Arabidopsis thaliana HOM05D005753 ORTHO05D007034 1.3e-15 87.0 139 38.8
BcaNung03572 Brassica carinata HOM05D005753 ORTHO05D007034 1.3e-15 87.0 138 38.4
CARHR268260 Cardamine hirsuta HOM05D005753 ORTHO05D007034 2.3e-15 86.3 142 40.1
Lj6g0004879 Lotus japonicus HOM05D005753 ORTHO05D007034 2.3e-15 86.3 138 42.8
Carub.0008s1522 Capsella rubella HOM05D005753 ORTHO05D007034 3.0e-15 85.9 139 38.8
EL10Ac4g07817 Beta vulgaris HOM05D005753 ORTHO05D007034 5.1e-15 85.1 148 37.8
Eucgr.F00770 Eucalyptus grandis HOM05D005753 ORTHO05D007034 8.7e-15 84.3 147 40.8
Medtr3g051270 Medicago truncatula HOM05D005753 ORTHO05D007034 8.7e-15 84.3 147 42.2
C07p55070 Brassica napus HOM05D005753 ORTHO05D007034 1.5e-14 83.6 152 36.8
Sp7g24940 Schrenkiella parvula HOM05D005753 ORTHO05D007034 1.5e-14 83.6 136 38.2
A01p18150 Brassica napus HOM05D005753 ORTHO05D007034 1.9e-14 83.2 139 36.7
BraA01t01770Z Brassica rapa HOM05D005753 ORTHO05D007034 1.9e-14 83.2 139 36.7
PGR083G0792 Punica granatum HOM05D005753 ORTHO05D007034 1.9e-14 83.2 139 39.6
AT4G26990 Arabidopsis thaliana HOM05D005753 ORTHO05D007034 4.3e-14 82.0 142 39.4
C01p23110 Brassica napus HOM05D005753 ORTHO05D007034 7.4e-14 81.3 139 36.0
Carub.0007s1385 Capsella rubella HOM05D005753 ORTHO05D007034 9.7e-14 80.9 142 40.1
Ah.06g186160 Amaranthus hybridus HOM05D005753 ORTHO05D007034 1.3e-13 80.5 138 36.2
BolC1t02245H Brassica oleracea HOM05D005753 ORTHO05D007034 1.3e-13 80.5 148 35.8
AL7G25840 Arabidopsis lyrata HOM05D005753 ORTHO05D007034 2.8e-13 79.3 142 36.6
Oeu062590.1 Olea europaea HOM05D005753 ORTHO05D007034 8.2e-13 77.8 86 47.7
unitig_8.g4619 Utricularia gibba HOM05D005753 ORTHO05D007034 8.2e-13 77.8 144 36.1
Psat0s6641g0040 Pisum sativum HOM05D005753 ORTHO05D007034 1.8e-12 76.6 115 41.7
Thhalv10015348m.g Eutrema salsugineum HOM05D005753 ORTHO05D007034 5.9e-11 71.6 133 35.3
BcaC06g32718 Brassica carinata HOM05D005753 ORTHO05D007034 1.3e-10 70.5 142 35.9
AUR62020456 Chenopodium quinoa HOM05D005753 ORTHO05D007034 2.5e-09 66.2 149 33.6
SGA_v2.0_scaffold74G24678 Striga asiatica HOM05D005753 ORTHO05D007034 4.3e-06 55.5 114 34.2
Phvul.006G042100 Phaseolus vulgaris HOM05D005753 ORTHO05D007034 5.7e-06 55.1 54 50.0
SEGI_12050 Sequoiadendron giganteum HOM05D003244 ORTHO05D003645 5.7e-06 55.1 147 29.9


User provided reference genes

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