Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 6.5e-73 277.3 143 100.0
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 5.7e-45 184.5 147 70.7
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 2.0e-34 149.4 141 58.2
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 7.8e-34 147.5 120 70.8
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 7.3e-32 141.0 138 55.8
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 3.6e-31 138.7 143 57.3
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 2.0e-29 132.9 139 51.1
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 2.0e-29 132.9 142 50.7
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.1e-27 127.1 140 50.0
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.4e-27 126.7 137 53.3
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 3.2e-27 125.6 137 52.6
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 2.0e-26 122.9 132 52.3
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 2.7e-26 122.5 139 54.0
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 7.8e-26 120.9 139 51.1
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 7.8e-26 120.9 139 46.8
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 1.2e-23 113.6 133 54.1
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 8.0e-23 110.9 137 49.6
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 8.0e-23 110.9 137 49.6
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 3.1e-22 109.0 112 53.6
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 1.2e-21 107.1 120 51.7
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 2.0e-21 106.3 139 49.6
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 7.5e-21 104.4 135 54.8
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 1.3e-20 103.6 137 48.9
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 2.4e-19 99.4 117 51.3
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 2.4e-19 99.4 133 48.9
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 2.1e-18 96.3 133 48.1
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 2.7e-18 95.9 138 47.1
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 4.6e-18 95.1 140 44.3
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 1.7e-17 93.2 135 39.3
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 9.9e-13 77.4 131 45.0
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 9.9e-13 77.4 132 37.9
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 1.3e-12 77.0 125 39.2
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 2.2e-12 76.3 117 40.2
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 1.9e-11 73.2 137 37.2
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 3.2e-11 72.4 144 40.3
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 4.1e-11 72.0 125 36.8
ECA246G1381 Erigeron canadensis HOM05D009197 ORTHO05D010857 5.4e-11 71.6 128 39.8
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 5.4e-11 71.6 136 38.2
Duzib205G1360 Durio zibethinus HOM05D009197 ORTHO05D010857 3.5e-10 68.9 100 44.0
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 1.0e-09 67.4 152 37.5
QL03p067585 Quercus lobata HOM05D009197 ORTHO05D010857 1.3e-09 67.0 107 38.3
CsaV3_1G008100 Cucumis sativus L. HOM05D022550 ORTHO05D025091 2.3e-09 66.2 150 36.0
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 3.9e-09 65.5 128 35.9
Sed0020424 Sechium edule HOM05D022550 ORTHO05D025091 5.1e-09 65.1 131 41.2
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 8.6e-09 64.3 152 34.9
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 8.6e-09 64.3 130 35.4
VMungo1215G2054 Vigna mungo HOM05D013104 ORTHO05D010857 1.2e-07 60.5 109 34.9
Migut.E00128 Erythranthe guttata HOM05D041172 ORTHO05D035185 1.6e-07 60.1 121 39.7
Nitab4.5_0011499g0020 Nicotiana tabacum HOM05D041172 ORTHO05D035185 2.1e-07 59.7 169 32.5
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 2.8e-07 59.3 137 38.0
Lalb_Chr07g0182451 Lupinus albus HOM05D013104 ORTHO05D010857 3.6e-07 58.9 140 35.0
Manes.06G099001 Manihot esculenta HOM05D009197 ORTHO05D010857 3.6e-07 58.9 89 44.9
PGSC0003DMG400022605 Solanum tuberosum HOM05D041172 ORTHO05D035185 6.2e-07 58.2 134 31.3
arahy.Tifrunner.gnm1.ann1.ABZM2I Arachis hypogaea HOM05D013104 ORTHO05D010857 8.1e-07 57.8 145 33.8
Lalb_Chr12g0201261 Lupinus albus HOM05D013104 ORTHO05D010857 2.4e-06 56.2 134 34.3
Hund05938 Selenicereus undatus HOM05D017674 ORTHO05D019531 3.1e-06 55.8 125 34.4


User provided reference genes

Program Settings