Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015929 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 1.3e-66 256.5 155 100.0
CSS0009612 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 9.2e-49 197.2 168 80.4
CSS0005297 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.3e-47 192.6 169 80.5
vmacro15245 Vaccinium macrocarpon HOM05D006881 ORTHO05D008423 9.3e-33 144.1 168 57.7
Actinidia00041 Actinidia chinensis HOM05D006881 ORTHO05D008423 1.3e-31 140.2 168 56.5
CSS0034417 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 2.6e-27 125.9 168 50.6
Ciclev10005896m.g Citrus clementina HOM05D006881 ORTHO05D008423 8.4e-26 120.9 171 54.4
CSS0002463 Camellia sinensis var. sinensis HOM05D006881 ORTHO05D008423 4.2e-25 118.6 153 51.6
GSVIVG01017769001 Vitis vinifera HOM05D006881 ORTHO05D008423 6.0e-24 114.8 168 54.8
Prupe.1G139200 Prunus persica HOM05D006881 ORTHO05D008423 3.9e-23 112.1 167 58.1
Dinv38306 Davidia involucrata HOM05D006881 ORTHO05D008423 5.1e-23 111.7 180 52.2
PGSC0003DMG400010658 Solanum tuberosum HOM05D006881 ORTHO05D008423 8.7e-23 110.9 168 51.8
Aa31LG11G11080 Aethionema arabicum HOM05D006881 ORTHO05D008423 1.5e-22 110.2 174 54.0
MSTRG.10082 Avicennia marina HOM05D006881 ORTHO05D008423 1.9e-22 109.8 172 54.1
Solyc01g067580.4 Solanum lycopersicum HOM05D006881 ORTHO05D008423 1.9e-22 109.8 168 51.8
Thecc.04G282000 Theobroma cacao HOM05D006881 ORTHO05D008423 1.9e-22 109.8 176 56.2
TAR636G2672 Trochodendron aralioides HOM05D006881 ORTHO05D008423 1.9e-22 109.8 118 56.8
Sopen01g029530 Solanum pennellii HOM05D006881 ORTHO05D008423 2.5e-22 109.4 168 51.2
Gohir.A02G048200 Gossypium hirsutum HOM05D006881 ORTHO05D008423 1.3e-21 107.1 170 56.5
Duzib212G0198 Durio zibethinus HOM05D006881 ORTHO05D008423 3.7e-21 105.5 172 55.2
Potri.008G216700 Populus trichocarpa HOM05D006881 ORTHO05D008423 3.7e-21 105.5 169 49.1
Gohir.D02G053300 Gossypium hirsutum HOM05D006881 ORTHO05D008423 4.8e-21 105.1 170 56.5
Sabra08G0154800 Salix brachista HOM05D006881 ORTHO05D008423 4.8e-21 105.1 170 50.6
Cc03_g02070 Coffea canephora HOM05D006881 ORTHO05D008423 1.4e-20 103.6 166 54.2
MBI19_g24002_MAGBIO Magnolia biondii HOM05D006881 ORTHO05D008423 1.8e-20 103.2 131 54.2
Manes.03G192600 Manihot esculenta HOM05D006881 ORTHO05D008423 3.1e-20 102.4 121 51.2
SalBow2G0124 Salvia bowleyana HOM05D006881 ORTHO05D008423 3.1e-20 102.4 170 52.9
Lsat_1_v5_gn_3_24181 Lactuca sativa HOM05D006881 ORTHO05D008423 4.0e-20 102.1 124 50.0
Carub.0006s1681 Capsella rubella HOM05D006881 ORTHO05D008423 6.9e-20 101.3 173 56.1
SGA_v2.0_scaffold86G26903 Striga asiatica HOM05D006881 ORTHO05D008423 6.9e-20 101.3 173 51.4
PSO210G1559 Papaver somniferum HOM05D006881 ORTHO05D008423 9.0e-20 100.9 131 48.9
Psat1g151960 Pisum sativum HOM05D006881 ORTHO05D008423 9.0e-20 100.9 161 50.3
Cpa.g.sc16.153 Carica papaya HOM05D006881 ORTHO05D008423 1.2e-19 100.5 118 52.5
TPR.G23710 Trifolium pratense HOM05D006881 ORTHO05D008423 1.2e-19 100.5 121 52.1
AT5G18540 Arabidopsis thaliana HOM05D006881 ORTHO05D008423 1.5e-19 100.1 177 53.7
BcaB05g23335 Brassica carinata HOM05D006881 ORTHO05D008423 2.0e-19 99.8 176 52.3
Atru.chr4.2800 Acer truncatum HOM05D006881 ORTHO05D008423 2.6e-19 99.4 168 53.0
AL6G29810 Arabidopsis lyrata HOM05D006881 ORTHO05D008423 3.4e-19 99.0 173 56.6
Gorai.005G059100 Gossypium raimondii HOM05D006881 ORTHO05D008423 4.5e-19 98.6 129 52.7
Lalb_Chr18g0051811 Lupinus albus HOM05D006881 ORTHO05D008423 4.5e-19 98.6 164 55.5
Peaxi162Scf00386g00414 Petunia axillaris HOM05D006881 ORTHO05D008423 4.5e-19 98.6 121 51.2
Phvul.009G245900 Phaseolus vulgaris HOM05D006881 ORTHO05D008423 4.5e-19 98.6 170 52.9
BcaC03g13606 Brassica carinata HOM05D006881 ORTHO05D008423 5.8e-19 98.2 176 51.7
C02p10000 Brassica napus HOM05D006881 ORTHO05D008423 5.8e-19 98.2 176 51.7
PSO170G5464 Papaver somniferum HOM05D006881 ORTHO05D008423 5.8e-19 98.2 131 48.9
TWI09G1277 Tripterygium wilfordii HOM05D006881 ORTHO05D008423 1.0e-18 97.4 171 50.9
CiPaw.01G150600 Carya illinoinensis HOM05D006881 ORTHO05D008423 1.3e-18 97.1 130 47.7
Thhalv10014829m.g Eutrema salsugineum HOM05D006881 ORTHO05D008423 1.7e-18 96.7 176 51.1
SalBow2G2956 Salvia bowleyana HOM05D006881 ORTHO05D008423 1.7e-18 96.7 117 50.4
CANSAT78G0809 Cannabis sativa HOM05D006881 ORTHO05D008423 2.2e-18 96.3 168 50.6
DCAR_024558 Daucus carota HOM05D006881 ORTHO05D008423 2.2e-18 96.3 134 48.5
Sp6g25790 Schrenkiella parvula HOM05D006881 ORTHO05D008423 2.2e-18 96.3 173 52.0
CARHR194480 Cardamine hirsuta HOM05D006881 ORTHO05D008423 2.9e-18 95.9 175 51.4
Oeu021111.1 Olea europaea HOM05D006881 ORTHO05D008423 3.8e-18 95.5 125 52.0
Migut.G00182 Erythranthe guttata HOM05D006881 ORTHO05D008423 5.0e-18 95.1 168 48.8
ECA246G4172 Erigeron canadensis HOM05D006881 ORTHO05D008423 6.5e-18 94.7 123 50.4
A02p04970 Brassica napus HOM05D006881 ORTHO05D008423 1.1e-17 94.0 122 50.8
CAN.G223.19 Capsicum annuum HOM05D006881 ORTHO05D008423 1.1e-17 94.0 130 45.4
QL06p008283 Quercus lobata HOM05D006881 ORTHO05D008423 1.1e-17 94.0 121 49.6
Glyma.15G154400 Glycine max HOM05D006881 ORTHO05D008423 1.4e-17 93.6 169 53.3
Rhsim02G0011900 Rhododendron simsii HOM05D006881 ORTHO05D008423 2.5e-17 92.8 102 57.8
arahy.Tifrunner.gnm1.ann1.E8HU74 Arachis hypogaea HOM05D006881 ORTHO05D008423 4.2e-17 92.0 115 53.9
HanXRQChr17g0536111 Helianthus annuus HOM05D006881 ORTHO05D008423 7.1e-17 91.3 119 48.7
BraA02t05456Z Brassica rapa HOM05D006881 ORTHO05D008423 9.3e-17 90.9 119 51.3
EL10Ac3g06585 Beta vulgaris HOM05D006881 ORTHO05D008423 1.2e-16 90.5 131 45.8
Glyma.09G046900 Glycine max HOM05D006881 ORTHO05D008423 1.2e-16 90.5 114 53.5
Os07g0669600 Oryza sativa ssp. japonica HOM05D006881 ORTHO05D008423 2.1e-16 89.7 111 52.3
unitig_748.g8741 Utricularia gibba HOM05D006881 ORTHO05D008423 2.1e-16 89.7 121 50.4
VMungo1309G2079 Vigna mungo HOM05D006881 ORTHO05D008423 2.1e-16 89.7 114 50.9
arahy.Tifrunner.gnm1.ann1.NXX1KJ Arachis hypogaea HOM05D006881 ORTHO05D008423 2.7e-16 89.4 124 50.0
Hund20570 Selenicereus undatus HOM05D006881 ORTHO05D008423 2.7e-16 89.4 131 45.8
THA.LOC104818851 Tarenaya hassleriana HOM05D006881 ORTHO05D008423 6.1e-16 88.2 119 47.1
Ca_02413_v3 Cicer arietinum L. HOM05D002802 ORTHO05D003166 1.0e-15 87.4 129 45.7
ClCG05G005980 Citrullus lanatus HOM05D006881 ORTHO05D008423 1.0e-15 87.4 130 45.4
Zm00001eb330210 Zea mays HOM05D006881 ORTHO05D008423 1.3e-15 87.0 121 45.5
Aqoxy2G03052 Aquilegia oxysepala HOM05D006881 ORTHO05D008423 2.3e-15 86.3 131 45.0
Eucgr.B01283 Eucalyptus grandis HOM05D006881 ORTHO05D008423 2.3e-15 86.3 114 50.0
Nn3g21363 Nelumbo nucifera HOM05D006881 ORTHO05D008423 6.7e-15 84.7 89 56.2
Lj6g0021421 Lotus japonicus HOM05D006881 ORTHO05D008423 8.7e-15 84.3 169 52.1
PGR031G0133 Punica granatum HOM05D006881 ORTHO05D008423 1.1e-14 84.0 181 50.3
Sed0007304 Sechium edule HOM05D006881 ORTHO05D008423 1.1e-14 84.0 131 44.3
Ah.13g074590 Amaranthus hybridus HOM05D006881 ORTHO05D008423 3.3e-14 82.4 125 44.8
BolC2t06902H Brassica oleracea HOM05D006881 ORTHO05D008423 3.3e-14 82.4 115 47.8
CsaV3_3G014430 Cucumis sativus L. HOM05D006881 ORTHO05D008423 3.3e-14 82.4 172 46.5
Medtr2g437470 Medicago truncatula HOM05D006881 ORTHO05D008423 5.7e-14 81.6 118 46.6
Hma1.2p1_0698F.1_g205340 Hydrangea macrophylla HOM05D006881 ORTHO05D008423 7.4e-14 81.3 85 56.5
CDE09G1155 Ceratophyllum demersum HOM05D006881 ORTHO05D008423 1.3e-13 80.5 111 46.8
RcHm_v2.0_Chr4g0421611 Rosa chinensis HOM05D006881 ORTHO05D008423 1.3e-13 80.5 168 50.0
Nitab4.5_0013689g0020 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.6e-13 80.1 87 52.9
MD13G1170800 Malus domestica HOM05D006881 ORTHO05D008423 2.2e-13 79.7 126 46.0
MELO3C006643.2 Cucumis melo HOM05D006881 ORTHO05D008423 4.8e-13 78.6 130 42.3
HPP92_025214 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.1e-12 77.4 118 44.9
HPP92_025226 Vanilla planifolia HOM05D006881 ORTHO05D008423 1.1e-12 77.4 118 44.9
FvH4_4g17670 Fragaria vesca HOM05D006881 ORTHO05D008423 2.4e-12 76.3 127 44.9
FAN12G2006 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.4e-12 76.3 127 44.9
FAN12G2996 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.4e-12 76.3 127 44.9
FAN17G1543 Fragaria x ananassa HOM05D006881 ORTHO05D008423 2.4e-12 76.3 127 44.9
BcaB08g36664 Brassica carinata HOM05D006881 ORTHO05D008423 4.1e-12 75.5 161 48.4
Sc19g0005040 Simmondsia chinensis HOM05D006881 ORTHO05D008423 4.1e-12 75.5 133 43.6
FAN07G1171 Fragaria x ananassa HOM05D006881 ORTHO05D008423 9.0e-12 74.3 127 44.1
SHI00284 Sapria himalayana HOM05D006881 ORTHO05D008423 2.6e-11 72.8 87 48.3
BraA10t44166Z Brassica rapa HOM05D006881 ORTHO05D008423 4.5e-11 72.0 175 50.3
A10p21020 Brassica napus HOM05D006881 ORTHO05D008423 2.9e-10 69.3 180 46.7
SMO367G0816 Selaginella moellendorffii HOM05D006881 ORTHO05D008423 3.8e-10 68.9 118 43.2
ATR0706G047 Amborella trichopoda HOM05D006881 ORTHO05D008423 1.9e-09 66.6 124 39.5
Pp3c15_10020 Physcomitrium patens HOM05D006881 ORTHO05D008423 1.6e-08 63.5 119 40.3
Mapoly0010s0048 Marchantia polymorpha HOM05D006881 ORTHO05D008423 2.1e-08 63.2 128 38.3
SEGI_11441 Sequoiadendron giganteum HOM05D006881 ORTHO05D008423 7.9e-08 61.2 127 37.8
Haze_01236 Corylus avellana HOM05D006881 ORTHO05D008423 1.0e-07 60.8 84 47.6
Nitab4.5_0000784g0080 Nicotiana tabacum HOM05D006881 ORTHO05D008423 1.5e-06 57.0 161 41.0


User provided reference genes

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