Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015882 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 9.8e-195 683.3 318 100.0
CSS0001088 Camellia sinensis var. sinensis HOM05D012885 ORTHO05D010877 7.9e-128 461.1 333 70.9
Rhsim05G0013500 Rhododendron simsii HOM05D012885 ORTHO05D010877 4.8e-40 169.5 345 35.9
Rhsim05G0014400 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.7e-37 161.0 379 34.6
Rhsim10G0205000 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.4e-31 141.4 310 34.2
Rhsim10G0208600 Rhododendron simsii HOM05D012885 ORTHO05D010877 1.8e-31 141.0 315 32.4
Rhsim10G0208800 Rhododendron simsii HOM05D012885 ORTHO05D010877 5.3e-31 139.4 315 32.4
Rhsim10G0205100 Rhododendron simsii HOM05D012885 ORTHO05D010877 9.0e-31 138.7 300 34.3
vmacro21156 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 4.6e-27 126.3 265 32.8
vmacro21157 Vaccinium macrocarpon HOM05D004925 ORTHO05D005643 8.4e-21 105.5 282 30.1
CSS0033575 Camellia sinensis var. sinensis HOM05D013111 ORTHO05D010877 7.6e-14 82.4 281 27.8
CSS0026782 Camellia sinensis var. sinensis HOM05D025100 ORTHO05D013046 3.2e-12 77.0 178 30.3
CSS0022125 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 1.6e-11 74.7 234 28.2
CSS0046102 Camellia sinensis var. sinensis HOM05D025536 ORTHO05D010877 7.9e-11 72.4 244 27.0
Dinv34884 Davidia involucrata HOM05D010628 ORTHO05D010877 1.1e-09 68.6 189 30.2
Aqoxy2G03423 Aquilegia oxysepala HOM05D011324 ORTHO05D013448 3.3e-09 67.0 158 31.6
Dinv25052 Davidia involucrata HOM05D011324 ORTHO05D013448 5.7e-09 66.2 142 30.3
Dinv01717 Davidia involucrata HOM05D011324 ORTHO05D013448 7.4e-09 65.9 225 26.7
C05p04170 Brassica napus HOM05D000249 ORTHO05D000206 2.2e-08 64.3 163 30.1
BolC5t29192H Brassica oleracea HOM05D000249 ORTHO05D000206 2.2e-08 64.3 163 30.1
Dinv28167 Davidia involucrata HOM05D011324 ORTHO05D013448 6.3e-08 62.8 201 26.4
C02p09060 Brassica napus HOM05D000249 ORTHO05D000206 1.1e-07 62.0 190 27.4
Carub.0001s1903 Capsella rubella HOM05D000249 ORTHO05D000206 1.8e-07 61.2 153 31.4
Dinv25049 Davidia involucrata HOM05D011324 ORTHO05D013448 1.8e-07 61.2 90 37.8
Dinv28170 Davidia involucrata HOM05D011324 ORTHO05D013448 2.4e-07 60.8 118 32.2
QL11p036944 Quercus lobata HOM05D010066 ORTHO05D009743 2.4e-07 60.8 241 27.8
Rhsim12G0051600 Rhododendron simsii HOM05D010628 ORTHO05D016249 4.1e-07 60.1 107 35.5
Dinv28162 Davidia involucrata HOM05D011324 ORTHO05D013448 6.9e-07 59.3 118 30.5
C07p63080 Brassica napus HOM05D000249 ORTHO05D000206 1.5e-06 58.2 134 30.6
CARHR095200 Cardamine hirsuta HOM05D000249 ORTHO05D000206 2.0e-06 57.8 113 31.9
Dinv28172 Davidia involucrata HOM05D011324 ORTHO05D013448 2.0e-06 57.8 94 33.0
Dinv28164 Davidia involucrata HOM05D011324 ORTHO05D013448 3.4e-06 57.0 225 25.8
Dinv28165 Davidia involucrata HOM05D011324 ORTHO05D013448 3.4e-06 57.0 118 30.5
Gohir.A06G047400 Gossypium hirsutum HOM05D009781 ORTHO05D011819 5.9e-06 56.2 147 27.2
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 5.9e-06 56.2 167 28.1


User provided reference genes

Program Settings