Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015867 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 8.0e-120 433.7 212 100.0
CSS0030364 Camellia sinensis var. sinensis HOM05D006668 ORTHO05D008252 8.9e-111 403.7 213 95.8
Rhsim06G0136200 Rhododendron simsii HOM05D006668 ORTHO05D008252 7.9e-43 177.9 130 74.6
Actinidia10993 Actinidia chinensis HOM05D006668 ORTHO05D008252 1.8e-42 176.8 130 73.8
vmacro12351 Vaccinium macrocarpon HOM05D006668 ORTHO05D008252 8.2e-40 167.9 131 72.5
Hma1.2p1_0002F.1_g002320 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.2e-37 159.8 131 66.4
Hma1.2p1_0002F.1_g002330 Hydrangea macrophylla HOM05D006668 ORTHO05D008252 2.2e-37 159.8 131 66.4
GSVIVG01020613001 Vitis vinifera HOM05D006668 ORTHO05D008252 2.4e-31 139.8 119 65.5
Nn1g06398 Nelumbo nucifera HOM05D006668 ORTHO05D008252 3.1e-31 139.4 130 63.8
Thecc.02G187500 Theobroma cacao HOM05D006668 ORTHO05D008252 1.2e-30 137.5 119 63.9
TAR627G0647 Trochodendron aralioides HOM05D006668 ORTHO05D008252 1.2e-30 137.5 132 60.6
Oeu036086.1 Olea europaea HOM05D006668 ORTHO05D008252 2.7e-30 136.3 130 58.5
QL08p040692 Quercus lobata HOM05D006668 ORTHO05D008252 2.7e-30 136.3 133 61.7
COL.COLO4_07343 Corchorus olitorius HOM05D006668 ORTHO05D008252 1.3e-29 134.0 129 60.5
Prupe.2G094200 Prunus persica HOM05D006668 ORTHO05D008252 1.2e-27 127.5 132 56.8
Duzib132G0616 Durio zibethinus HOM05D006668 ORTHO05D008252 6.1e-27 125.2 121 57.9
MD15G1126800 Malus domestica HOM05D006668 ORTHO05D008252 8.8e-26 121.3 126 58.7
CANSAT54G0862 Cannabis sativa HOM05D006668 ORTHO05D008252 1.5e-25 120.6 119 62.2
Gohir.A08G243900 Gossypium hirsutum HOM05D006668 ORTHO05D008252 2.6e-25 119.8 119 58.8
Cpa.g.sc165.1 Carica papaya HOM05D006668 ORTHO05D008252 4.4e-25 119.0 132 52.3
Gohir.D08G264800 Gossypium hirsutum HOM05D006668 ORTHO05D008252 5.7e-25 118.6 119 58.0
Gorai.004G282700 Gossypium raimondii HOM05D006668 ORTHO05D008252 5.7e-25 118.6 119 58.0
Manes.12G086300 Manihot esculenta HOM05D006668 ORTHO05D008252 4.8e-24 115.5 129 54.3
Aqoxy1G02297 Aquilegia oxysepala HOM05D006668 ORTHO05D008252 6.3e-24 115.2 133 56.4
Ciclev10015198m.g Citrus clementina HOM05D006668 ORTHO05D008252 3.1e-23 112.8 131 52.7
Nitab4.5_0000621g0040 Nicotiana tabacum HOM05D006668 ORTHO05D008252 9.1e-23 111.3 130 55.4
Cc05_g07800 Coffea canephora HOM05D006668 ORTHO05D008252 1.6e-22 110.5 129 54.3
Nitab4.5_0006091g0020 Nicotiana tabacum HOM05D006668 ORTHO05D008252 2.7e-22 109.8 130 53.1
SalBow7G4646 Salvia bowleyana HOM05D006668 ORTHO05D008252 2.7e-22 109.8 126 52.4
Cfa014669 Carpinus fangiana HOM05D006668 ORTHO05D008252 3.5e-22 109.4 133 54.1
Haze_13261 Corylus avellana HOM05D006668 ORTHO05D008252 3.5e-22 109.4 133 54.1
Migut.M00152 Erythranthe guttata HOM05D006668 ORTHO05D008252 4.5e-22 109.0 127 54.3
Peaxi162Scf00189g00018 Petunia axillaris HOM05D006668 ORTHO05D008252 5.0e-21 105.5 130 51.5
SGA_v2.0_scaffold70G23480 Striga asiatica HOM05D006668 ORTHO05D008252 8.5e-21 104.8 131 51.1
DCAR_009761 Daucus carota HOM05D006668 ORTHO05D008252 1.5e-20 104.0 129 52.7
Atru.chr6.2861 Acer truncatum HOM05D006668 ORTHO05D008252 2.5e-20 103.2 113 53.1
Lalb_Chr03g0029681 Lupinus albus HOM05D006668 ORTHO05D008252 1.2e-19 100.9 136 50.7
Lsat_1_v5_gn_8_69500 Lactuca sativa HOM05D006668 ORTHO05D008252 2.1e-19 100.1 167 46.1
BolC9t55549H Brassica oleracea HOM05D006668 ORTHO05D008252 2.7e-19 99.8 132 48.5
Carub.0008s0437 Capsella rubella HOM05D006668 ORTHO05D008252 4.7e-19 99.0 132 46.2
Sp2g08980 Schrenkiella parvula HOM05D006668 ORTHO05D008252 6.1e-19 98.6 136 45.6
C09p26530 Brassica napus HOM05D006668 ORTHO05D008252 1.0e-18 97.8 132 47.7
BcaC04g21861 Brassica carinata HOM05D006668 ORTHO05D008252 1.4e-18 97.4 132 48.5
PSO675G8266 Papaver somniferum HOM05D006668 ORTHO05D008252 1.4e-18 97.4 131 48.1
BcaC04g21859 Brassica carinata HOM05D006668 ORTHO05D008252 1.8e-18 97.1 129 49.6
Thhalv10003234m.g Eutrema salsugineum HOM05D006668 ORTHO05D008252 4.0e-18 95.9 135 45.2
THA.LOC104801157 Tarenaya hassleriana HOM05D006668 ORTHO05D008252 4.0e-18 95.9 137 45.3
PGR142G0029 Punica granatum HOM05D006668 ORTHO05D008252 5.2e-18 95.5 131 45.8
FvH4_5g30510 Fragaria vesca HOM05D006668 ORTHO05D008252 6.8e-18 95.1 125 50.4
FAN08G3049 Fragaria x ananassa HOM05D006668 ORTHO05D008252 6.8e-18 95.1 125 50.4
AL8G15870 Arabidopsis lyrata HOM05D006668 ORTHO05D008252 1.2e-17 94.4 132 47.0
Duzib248G1400 Durio zibethinus HOM05D006668 ORTHO05D008252 1.2e-17 94.4 87 60.9
FAN18G2410 Fragaria x ananassa HOM05D006668 ORTHO05D008252 1.5e-17 94.0 125 49.6
PSO541G3384 Papaver somniferum HOM05D006668 ORTHO05D008252 1.5e-17 94.0 137 49.6
FAN13G2061 Fragaria x ananassa HOM05D006668 ORTHO05D008252 3.4e-17 92.8 125 49.6
Glyma.12G119000 Glycine max HOM05D006668 ORTHO05D008252 5.7e-17 92.0 137 49.6
HanXRQChr17g0555041 Helianthus annuus HOM05D006668 ORTHO05D008252 5.7e-17 92.0 118 53.4
CiPaw.03G182600 Carya illinoinensis HOM05D006668 ORTHO05D008252 7.5e-17 91.7 133 46.6
Sopen07g027510 Solanum pennellii HOM05D006668 ORTHO05D008252 7.5e-17 91.7 122 51.6
BcaC06g31649 Brassica carinata HOM05D006668 ORTHO05D008252 1.3e-16 90.9 122 50.0
A09p20930 Brassica napus HOM05D006668 ORTHO05D008252 1.3e-16 90.9 132 46.2
BraA09t37693Z Brassica rapa HOM05D006668 ORTHO05D008252 1.3e-16 90.9 132 46.2
AT5G44150 Arabidopsis thaliana HOM05D006668 ORTHO05D008252 1.7e-16 90.5 131 44.3
Solyc07g053560.3 Solanum lycopersicum HOM05D006668 ORTHO05D008252 1.7e-16 90.5 122 50.8
PGSC0003DMG400009383 Solanum tuberosum HOM05D006668 ORTHO05D008252 1.7e-16 90.5 122 51.6
RcHm_v2.0_Chr7g0225261 Rosa chinensis HOM05D006668 ORTHO05D008252 4.9e-16 89.0 131 45.8
TPR.G14253 Trifolium pratense HOM05D006668 ORTHO05D008252 1.1e-15 87.8 135 43.7
CAN.G1808.7 Capsicum annuum HOM05D006668 ORTHO05D008252 1.4e-15 87.4 143 46.2
Lj3g0004052 Lotus japonicus HOM05D006668 ORTHO05D008252 1.4e-15 87.4 141 46.1
MSTRG.5024 Avicennia marina HOM05D006668 ORTHO05D008252 3.1e-15 86.3 118 47.5
CARHR179120 Cardamine hirsuta HOM05D006668 ORTHO05D008252 3.1e-15 86.3 120 53.3
SGA_v2.0_scaffold58G20553 Striga asiatica HOM05D006668 ORTHO05D008252 5.4e-15 85.5 120 47.5
Ca_18916_v3 Cicer arietinum L. HOM05D006668 ORTHO05D008252 9.2e-15 84.7 132 45.5
TWI59G1373 Tripterygium wilfordii HOM05D006668 ORTHO05D008252 9.2e-15 84.7 129 46.5
Glyma.06G287100 Glycine max HOM05D006668 ORTHO05D008252 2.0e-14 83.6 140 47.1
Medtr4g079100 Medicago truncatula HOM05D006668 ORTHO05D008252 3.5e-14 82.8 131 44.3
Psat7g136840 Pisum sativum HOM05D006668 ORTHO05D008252 3.5e-14 82.8 135 41.5
Aa31LG5G3090 Aethionema arabicum HOM05D006668 ORTHO05D008252 4.5e-14 82.4 141 43.3
Phvul.010G089800 Phaseolus vulgaris HOM05D006668 ORTHO05D008252 4.5e-14 82.4 131 45.0
Sed0009608 Sechium edule HOM05D006668 ORTHO05D008252 1.1e-12 77.8 130 45.4
CDE10G0622 Ceratophyllum demersum HOM05D006668 ORTHO05D008252 1.5e-12 77.4 129 44.2
ClCG03G006150 Citrullus lanatus HOM05D006668 ORTHO05D008252 1.9e-12 77.0 139 42.4
VMungo0037G0001 Vigna mungo HOM05D006668 ORTHO05D008252 1.9e-12 77.0 132 44.7
ClCG00G003780 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.3e-12 75.9 129 44.2
ClCG02G002300 Citrullus lanatus HOM05D006668 ORTHO05D008252 4.3e-12 75.9 129 44.2
MBI06_g42697_MAGBIO Magnolia biondii HOM05D006668 ORTHO05D008252 7.3e-12 75.1 133 41.4
arahy.Tifrunner.gnm1.ann1.Y4MWM5 Arachis hypogaea HOM05D006668 ORTHO05D008252 1.2e-11 74.3 142 37.3
Oeu016899.1 Olea europaea HOM05D006668 ORTHO05D008252 4.7e-11 72.4 73 56.2
ECA232G0319 Erigeron canadensis HOM05D006668 ORTHO05D008252 1.0e-10 71.2 210 32.9
Potri.017G017200 Populus trichocarpa HOM05D006668 ORTHO05D008252 2.3e-10 70.1 145 39.3
BcaB07g30967 Brassica carinata HOM05D006668 ORTHO05D008252 8.9e-10 68.2 144 39.6
MELO3C018863.2 Cucumis melo HOM05D006668 ORTHO05D008252 1.5e-09 67.4 127 40.9
ATR0602G285 Amborella trichopoda HOM05D006668 ORTHO05D008252 2.6e-09 66.6 118 39.8
Hund01006 Selenicereus undatus HOM05D006668 ORTHO05D008252 2.6e-09 66.6 147 35.4
HPP92_023281 Vanilla planifolia HOM05D006668 ORTHO05D008252 9.8e-09 64.7 115 40.0
CsaV3_7G003140 Cucumis sativus L. HOM05D006668 ORTHO05D008252 1.4e-07 60.8 138 37.0


User provided reference genes

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