Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015837 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 0.0e+00 1458.0 733 100.0
CSS0022030 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 1.6e-271 939.5 784 67.2
Dinv40921 Davidia involucrata HOM05D005664 ORTHO05D006509 1.5e-269 932.9 740 69.2
Rhsim06G0235600 Rhododendron simsii HOM05D005664 ORTHO05D006509 2.8e-265 918.7 745 67.4
Actinidia30345 Actinidia chinensis HOM05D005664 ORTHO05D006509 8.6e-262 907.1 734 68.5
vmacro11645 Vaccinium macrocarpon HOM05D005664 ORTHO05D006509 3.0e-254 882.1 748 65.9
Dinv19639 Davidia involucrata HOM05D005664 ORTHO05D006509 3.1e-251 872.1 719 68.0
CSS0025023 Camellia sinensis var. sinensis HOM05D005664 ORTHO05D006509 3.2e-216 755.7 697 62.6
Hma1.2p1_0193F.1_g084390 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 1.9e-213 746.5 742 58.2
TAR627G1206 Trochodendron aralioides HOM05D005664 ORTHO05D006509 6.9e-203 711.4 738 56.2
TAR629G3046 Trochodendron aralioides HOM05D005664 ORTHO05D006509 2.5e-197 693.0 734 55.2
Cfa016966 Carpinus fangiana HOM05D005664 ORTHO05D006509 3.8e-185 652.5 752 53.5
Haze_09920 Corylus avellana HOM05D005664 ORTHO05D006509 2.5e-184 649.8 767 52.8
QL08p000429 Quercus lobata HOM05D005664 ORTHO05D006509 7.9e-183 644.8 755 52.6
Nn1g09430 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.8e-177 625.9 866 44.8
Nn7g37452 Nelumbo nucifera HOM05D005664 ORTHO05D006509 3.0e-174 616.3 897 43.5
Atru.chr2.3903 Acer truncatum HOM05D005664 ORTHO05D006509 2.4e-171 606.7 741 50.7
Ciclev10007600m.g Citrus clementina HOM05D005664 ORTHO05D006509 9.1e-171 604.7 741 49.9
Potri.001G472600 Populus trichocarpa HOM05D005664 ORTHO05D006509 5.2e-166 589.0 741 49.7
CiPaw.12G143100 Carya illinoinensis HOM05D005664 ORTHO05D006509 6.3e-164 582.0 752 50.0
Sabra16G0320800 Salix brachista HOM05D005664 ORTHO05D006509 2.4e-163 580.1 739 49.3
Manes.01G007400 Manihot esculenta HOM05D005664 ORTHO05D006509 3.1e-163 579.7 741 50.6
Prupe.6G035900 Prunus persica HOM05D005664 ORTHO05D006509 9.4e-160 568.2 761 48.8
Potri.011G169200 Populus trichocarpa HOM05D005664 ORTHO05D006509 4.7e-159 565.8 739 49.1
Thecc.07G000900 Theobroma cacao HOM05D005664 ORTHO05D006509 4.7e-159 565.8 761 47.7
Manes.01G007300 Manihot esculenta HOM05D005664 ORTHO05D006509 5.2e-158 562.4 743 50.7
MD11G1047100 Malus domestica HOM05D005664 ORTHO05D006509 1.8e-155 553.9 760 48.2
MD03G1043600 Malus domestica HOM05D005664 ORTHO05D006509 2.7e-154 550.1 759 48.2
Sabra11G0137600 Salix brachista HOM05D005664 ORTHO05D006509 2.9e-153 546.6 741 48.6
Cc05_g15770 Coffea canephora HOM05D005664 ORTHO05D006509 8.0e-151 538.5 750 47.9
DCAR_016806 Daucus carota HOM05D005664 ORTHO05D006509 2.6e-149 533.5 746 46.6
Duzib170G1037 Durio zibethinus HOM05D005664 ORTHO05D006509 5.4e-147 525.8 760 45.9
Hma1.2p1_0321F.1_g124370 Hydrangea macrophylla HOM05D005664 ORTHO05D006509 2.7e-146 523.5 743 46.6
Duzib268G0032 Durio zibethinus HOM05D005664 ORTHO05D006509 2.5e-144 516.9 760 45.5
Oeu052022.1 Olea europaea HOM05D005664 ORTHO05D006509 1.2e-143 514.6 740 46.6
Eucgr.F01983 Eucalyptus grandis HOM05D005664 ORTHO05D006509 3.4e-141 506.5 761 42.6
Oeu015275.1 Olea europaea HOM05D005664 ORTHO05D006509 4.4e-141 506.1 740 45.9
COL.COLO4_30921 Corchorus olitorius HOM05D005664 ORTHO05D006509 9.8e-141 505.0 753 45.2
MELO3C013227.2 Cucumis melo HOM05D005664 ORTHO05D006509 2.4e-139 500.4 758 43.9
MSTRG.16129 Avicennia marina HOM05D005664 ORTHO05D006509 4.1e-139 499.6 738 44.6
PGSC0003DMG400011270 Solanum tuberosum HOM05D005664 ORTHO05D006509 2.0e-138 497.3 747 44.7
Cpa.g.sc12.60 Carica papaya HOM05D005664 ORTHO05D006509 4.6e-138 496.1 804 44.3
TWI39G0285 Tripterygium wilfordii HOM05D005664 ORTHO05D006509 1.3e-137 494.6 788 43.9
CsaV3_7G021290 Cucumis sativus L. HOM05D005664 ORTHO05D006509 1.7e-137 494.2 756 43.3
ClCG09G021770 Citrullus lanatus HOM05D005664 ORTHO05D006509 3.9e-137 493.0 763 43.6
CAN.G492.59 Capsicum annuum HOM05D005664 ORTHO05D006509 6.6e-137 492.3 733 44.6
SalBow8G4453 Salvia bowleyana HOM05D005664 ORTHO05D006509 1.9e-136 490.7 726 44.4
Gorai.013G147600 Gossypium raimondii HOM05D005664 ORTHO05D006509 4.7e-135 486.1 762 44.4
Gohir.A13G128200 Gossypium hirsutum HOM05D005664 ORTHO05D006509 3.1e-134 483.4 761 44.3
Gohir.D13G131600 Gossypium hirsutum HOM05D005664 ORTHO05D006509 5.2e-134 482.6 762 43.8
Solyc10g005700.3 Solanum lycopersicum HOM05D005664 ORTHO05D006509 5.2e-134 482.6 747 44.4
Sopen10g001670 Solanum pennellii HOM05D005664 ORTHO05D006509 6.8e-134 482.3 747 44.2
MBI14_g10255_MAGBIO Magnolia biondii HOM05D005664 ORTHO05D006509 2.9e-132 476.9 745 42.6
FvH4_3g41520 Fragaria vesca HOM05D005664 ORTHO05D006509 1.9e-131 474.2 751 43.0
FAN16G2562 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.1e-128 464.9 754 42.6
FAN11G0133 Fragaria x ananassa HOM05D005664 ORTHO05D006509 4.3e-128 463.0 756 42.3
Nitab4.5_0000611g0180 Nicotiana tabacum HOM05D005664 ORTHO05D006509 2.8e-127 460.3 748 41.7
FAN25G3031 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.4e-126 458.0 754 42.3
FAN21G3314 Fragaria x ananassa HOM05D005664 ORTHO05D006509 1.8e-126 457.6 759 42.3
Sed0014853 Sechium edule HOM05D005664 ORTHO05D006509 5.8e-125 452.6 757 41.6
PGSC0003DMG400002313 Solanum tuberosum HOM05D005664 ORTHO05D006509 5.8e-125 452.6 740 42.2
RcHm_v2.0_Chr5g0074471 Rosa chinensis HOM05D005664 ORTHO05D006509 1.3e-121 441.4 755 42.5
Nitab4.5_0001622g0140 Nicotiana tabacum HOM05D005664 ORTHO05D006509 5.1e-121 439.5 739 40.7
PSO782G2174 Papaver somniferum HOM05D005664 ORTHO05D006509 1.5e-120 438.0 741 39.9
CAN.G8.46 Capsicum annuum HOM05D005664 ORTHO05D006509 4.3e-120 436.4 759 41.2
PSO063G4895 Papaver somniferum HOM05D005664 ORTHO05D006509 1.6e-119 434.5 741 39.7
Sed0021044 Sechium edule HOM05D005664 ORTHO05D006509 6.8e-118 429.1 732 41.4
Aqoxy1G04294 Aquilegia oxysepala HOM05D005664 ORTHO05D006509 4.4e-117 426.4 759 40.1
Peaxi162Scf00006g00092 Petunia axillaris HOM05D005664 ORTHO05D006509 1.3e-116 424.9 754 40.7
Sopen12g008050 Solanum pennellii HOM05D005664 ORTHO05D006509 6.0e-114 416.0 749 40.1
Solyc12g017230.2 Solanum lycopersicum HOM05D005664 ORTHO05D006509 7.8e-114 415.6 751 40.7
Migut.M01578 Erythranthe guttata HOM05D005664 ORTHO05D006509 5.4e-107 392.9 734 39.2
Lsat_1_v5_gn_7_115861 Lactuca sativa HOM05D005664 ORTHO05D006509 2.2e-100 370.9 734 38.8
SGA_v2.0_scaffold186G40232 Striga asiatica HOM05D005664 ORTHO05D006509 6.4e-100 369.4 747 38.8
Oeu062669.1 Olea europaea HOM05D005664 ORTHO05D006509 3.2e-99 367.1 736 39.7
Lalb_Chr18g0048701 Lupinus albus HOM05D005664 ORTHO05D006509 3.5e-98 363.6 754 38.5
arahy.Tifrunner.gnm1.ann1.GFW533 Arachis hypogaea HOM05D005664 ORTHO05D006509 4.3e-96 356.7 750 38.3
arahy.Tifrunner.gnm1.ann1.C46LV5 Arachis hypogaea HOM05D005664 ORTHO05D006509 5.6e-96 356.3 750 38.3
THA.LOC104813471 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 6.2e-95 352.8 770 37.3
Lj3g0022247 Lotus japonicus HOM05D005664 ORTHO05D006509 5.8e-93 346.3 748 37.8
Glyma.04G114300 Glycine max HOM05D005664 ORTHO05D006509 8.4e-92 342.4 730 38.5
HanXRQChr17g0546881 Helianthus annuus HOM05D005664 ORTHO05D006509 9.3e-91 339.0 744 37.2
Glyma.06G321000 Glycine max HOM05D005664 ORTHO05D006509 1.2e-90 338.6 731 38.4
THA.LOC104813465 Tarenaya hassleriana HOM05D005664 ORTHO05D006509 1.2e-90 338.6 764 35.7
VMungo1080G0452 Vigna mungo HOM05D005664 ORTHO05D006509 1.0e-89 335.5 746 37.5
Phvul.005G005100 Phaseolus vulgaris HOM05D005664 ORTHO05D006509 1.1e-88 332.0 737 37.2
unitig_37.g12212 Utricularia gibba HOM05D005664 ORTHO05D006509 1.1e-88 332.0 744 35.5
TPR.G16700 Trifolium pratense HOM05D005664 ORTHO05D006509 1.3e-87 328.6 780 37.7
Medtr3g009540 Medicago truncatula HOM05D005664 ORTHO05D006509 2.0e-85 321.2 733 37.4
Lalb_Chr15g0079911 Lupinus albus HOM05D005664 ORTHO05D006509 1.7e-84 318.2 694 35.4
CDE11G0421 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.9e-84 317.4 766 35.4
Hund01929 Selenicereus undatus HOM05D005664 ORTHO05D006509 1.9e-83 314.7 711 35.3
AUR62015929 Chenopodium quinoa HOM05D005664 ORTHO05D006509 2.5e-83 314.3 715 36.9
Ca_14130_v3 Cicer arietinum L. HOM05D005664 ORTHO05D006509 9.3e-83 312.4 710 36.8
Psat5g231360 Pisum sativum HOM05D005664 ORTHO05D006509 4.6e-82 310.1 812 36.1
Aa31LG5G11790 Aethionema arabicum HOM05D005664 ORTHO05D006509 3.0e-81 307.4 768 32.2
Hund01927 Selenicereus undatus HOM05D005664 ORTHO05D006509 7.4e-80 302.8 693 34.5
Carub.0007s1448 Capsella rubella HOM05D005664 ORTHO05D006509 1.6e-79 301.6 777 33.6
AUR62040680 Chenopodium quinoa HOM05D005664 ORTHO05D006509 4.8e-79 300.1 711 35.3
ECA236G2587 Erigeron canadensis HOM05D005664 ORTHO05D006509 1.4e-78 298.5 740 33.8
AL7G26500 Arabidopsis lyrata HOM05D005664 ORTHO05D006509 4.1e-78 297.0 783 33.3
Sp7g24360 Schrenkiella parvula HOM05D005664 ORTHO05D006509 5.9e-77 293.1 771 34.1
AT4G26450 Arabidopsis thaliana HOM05D005664 ORTHO05D006509 1.0e-76 292.4 775 33.8
CARHR234010 Cardamine hirsuta HOM05D005664 ORTHO05D006509 1.4e-75 288.5 785 33.2
Lj1A901T36 Lonicera japonica HOM05D005664 ORTHO05D006509 2.5e-75 287.7 297 57.6
Thhalv10024531m.g Eutrema salsugineum HOM05D005664 ORTHO05D006509 3.3e-72 277.3 791 31.2
EL10Ac4g07635 Beta vulgaris HOM05D005664 ORTHO05D006509 4.3e-72 276.9 708 33.5
Sc03g0011800 Simmondsia chinensis HOM05D005664 ORTHO05D006509 3.7e-71 273.9 744 34.0
CDE05G2921 Ceratophyllum demersum HOM05D005664 ORTHO05D006509 2.4e-70 271.2 757 31.7
CANSAT11G1251 Cannabis sativa HOM05D005664 ORTHO05D006509 5.5e-67 260.0 732 33.3
A03p56710 Brassica napus HOM05D005664 ORTHO05D006509 1.8e-65 255.0 786 31.9
BraA03t14741Z Brassica rapa HOM05D005664 ORTHO05D006509 1.8e-65 255.0 786 31.9
Ah.04g166380 Amaranthus hybridus HOM05D005664 ORTHO05D006509 2.8e-63 247.7 706 30.6
BcaC06g32747 Brassica carinata HOM05D005664 ORTHO05D006509 1.2e-61 242.3 799 31.5
C07p54910 Brassica napus HOM05D005664 ORTHO05D006509 5.0e-60 236.9 789 31.4
BolC7t45979H Brassica oleracea HOM05D005664 ORTHO05D006509 5.0e-60 236.9 789 31.4
BcaC09g50709 Brassica carinata HOM05D005664 ORTHO05D006509 2.5e-59 234.6 763 31.5
A01p17690 Brassica napus HOM05D005664 ORTHO05D006509 4.2e-59 233.8 774 31.0
BraA01t01725Z Brassica rapa HOM05D005664 ORTHO05D006509 7.2e-59 233.0 773 31.3
MSTRG.13052 Avicennia marina HOM05D005664 ORTHO05D006509 1.2e-58 232.3 566 36.0
C01p22360 Brassica napus HOM05D005664 ORTHO05D006509 6.1e-58 229.9 765 31.1
BolC1t02167H Brassica oleracea HOM05D005664 ORTHO05D006509 2.3e-57 228.0 772 31.5
unitig_46.g18526 Utricularia gibba HOM05D005664 ORTHO05D006509 4.4e-56 223.8 664 32.4
Ah.06g181030 Amaranthus hybridus HOM05D000037 ORTHO05D006509 3.6e-50 204.1 724 28.5
GSVIVG01014850001 Vitis vinifera HOM05D005664 ORTHO05D006509 3.6e-50 204.1 156 69.2
ATR0021G035 Amborella trichopoda HOM05D005664 ORTHO05D006509 1.3e-47 195.7 862 29.9
Lj1A901G38 Lonicera japonica HOM05D005664 ORTHO05D006509 4.1e-46 190.7 130 72.3
Migut.H01706 Erythranthe guttata HOM05D005664 ORTHO05D006509 2.3e-41 174.9 756 29.1
HPP92_019365 Vanilla planifolia HOM05D005664 ORTHO05D006509 9.8e-40 169.5 719 27.0
SEGI_32826 Sequoiadendron giganteum HOM05D005664 ORTHO05D006509 1.2e-24 119.4 688 27.2
Zm00001eb082760 Zea mays HOM05D019841 ORTHO05D006509 1.7e-23 115.5 820 23.8
Zm00001eb422560 Zea mays HOM05D019841 ORTHO05D006509 3.0e-20 104.8 772 23.4
MSTRG.7045 Avicennia marina HOM05D005664 ORTHO05D006509 3.9e-20 104.4 95 55.8
Psat6g196680 Pisum sativum HOM05D005664 ORTHO05D006509 1.7e-12 79.0 115 42.6
Actinidia33104 Actinidia chinensis HOM05D005664 ORTHO05D006509 3.9e-12 77.8 43 86.0
Os04g0431000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D006509 6.6e-12 77.0 205 30.7
HPP92_028056 Vanilla planifolia HOM05D005664 ORTHO05D006509 3.6e-10 71.2 232 32.8
Os02g0550000 Oryza sativa ssp. japonica HOM05D019841 ORTHO05D037008 1.4e-09 69.3 774 22.0


User provided reference genes

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