Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015805 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 2.4e-270 934.9 455 100.0
CSS0043108 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D012209 1.4e-145 520.4 417 66.2
CSS0040956 Camellia sinensis var. sinensis HOM05D035337 ORTHO05D000116 4.7e-85 319.3 250 64.8
CSS0037614 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 3.4e-67 260.0 311 50.2
CSS0036274 Camellia sinensis var. sinensis HOM05D010739 ORTHO05D012209 1.9e-57 227.6 318 45.9
Rhsim08G0029200 Rhododendron simsii HOM05D009413 ORTHO05D000116 2.4e-20 104.4 163 36.8
CSS0005680 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.4e-15 88.6 74 59.5
CSS0014704 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-15 88.2 74 59.5
CSS0015075 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-15 88.2 74 59.5
CSS0024057 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-15 88.2 74 59.5
CSS0050094 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-15 88.2 74 59.5
MBI11_g42047_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 2.6e-14 84.3 154 34.4
CSS0013348 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.8e-12 78.2 76 47.4
Haze_12632 Corylus avellana HOM05D000001 ORTHO05D000003 1.6e-11 75.1 159 32.1
CSS0038001 Camellia sinensis var. sinensis HOM05D004978 ORTHO05D005621 2.7e-11 74.3 47 72.3
QL05p071009 Quercus lobata HOM05D013248 ORTHO05D000116 4.5e-11 73.6 133 31.6
QL08p019411 Quercus lobata HOM05D000965 ORTHO05D000842 5.9e-11 73.2 360 21.4
Gohir.A12G182300 Gossypium hirsutum HOM05D004287 ORTHO05D004569 7.7e-11 72.8 191 30.9
Gohir.D12G185200 Gossypium hirsutum HOM05D004287 ORTHO05D004569 1.7e-10 71.6 165 32.1
Gorai.008G198600 Gossypium raimondii HOM05D004287 ORTHO05D004569 1.7e-10 71.6 165 32.1
MBI03_g00028_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.7e-10 71.6 188 29.8
Rhsim02G0240900 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-10 71.2 102 42.2
Rhsim03G0048400 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.2e-10 71.2 102 41.2
Rhsim13G0157600 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.9e-10 70.9 102 42.2
Rhsim01G0089000 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.8e-10 70.5 102 41.2
Rhsim04G0145300 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.8e-10 70.5 102 42.2
Haze_22203 Corylus avellana HOM05D022083 ORTHO05D000116 5.0e-10 70.1 132 34.8
TWI36G1199 Tripterygium wilfordii HOM05D012521 ORTHO05D000116 5.0e-10 70.1 116 35.3
Atru.chr6.434_Atru.chr6.435 Acer truncatum HOM05D000706 ORTHO05D001554 8.5e-10 69.3 229 26.6
QL08p058446 Quercus lobata HOM05D012835 ORTHO05D018094 8.5e-10 69.3 117 30.8
Rhsim05G0083000 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.5e-10 69.3 92 44.6
Rhsim08G0093200 Rhododendron simsii HOM05D000034 ORTHO05D000037 8.5e-10 69.3 102 41.2
TWI59G0099 Tripterygium wilfordii HOM05D011150 ORTHO05D011451 8.5e-10 69.3 116 34.5
RhsimUnG0152200 Rhododendron simsii HOM05D000034 ORTHO05D000037 1.5e-09 68.6 102 41.2
Atru.chr6.385 Acer truncatum HOM05D000706 ORTHO05D000116 1.9e-09 68.2 234 26.5
CANSAT35G1012 Cannabis sativa HOM05D027150 ORTHO05D028423 1.9e-09 68.2 109 35.8
MBI05_g14943_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.9e-09 68.2 125 33.6
MBI04_g39792_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 3.2e-09 67.4 149 28.2
Rhsim09G0055100 Rhododendron simsii HOM05D000034 ORTHO05D000037 3.2e-09 67.4 102 40.2
MBI08_g10608_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 4.2e-09 67.0 142 32.4
MBI16_g34672_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 5.5e-09 66.6 110 33.6
QL05p031643 Quercus lobata HOM05D009413 ORTHO05D000116 5.5e-09 66.6 163 25.2
QL10p041460 Quercus lobata HOM05D009413 ORTHO05D000116 5.5e-09 66.6 163 25.2
QL11p005301 Quercus lobata HOM05D009413 ORTHO05D000116 5.5e-09 66.6 163 25.2
CSS0019129 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 7.2e-09 66.2 76 44.7
Rhsim09G0200000 Rhododendron simsii HOM05D000034 ORTHO05D000037 9.4e-09 65.9 102 40.2
MBI04_g07086_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 1.6e-08 65.1 135 30.4
Rhsim02G0038000 Rhododendron simsii HOM05D000034 ORTHO05D000037 2.7e-08 64.3 102 39.2
MBI16_g42111_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 3.6e-08 63.9 131 36.6
CSS0038533 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.7e-08 63.5 59 50.8
Cfa021302 Carpinus fangiana HOM05D026864 ORTHO05D000116 6.1e-08 63.2 124 30.6
Oeu006317.1 Olea europaea HOM05D002774 ORTHO05D000116 6.1e-08 63.2 175 29.1
vmacro01452 Vaccinium macrocarpon HOM05D000034 ORTHO05D000037 6.1e-08 63.2 71 43.7
CSS0019987 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 8.0e-08 62.8 59 50.8
MBI10_g21035_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 8.0e-08 62.8 133 28.6
MBI19_g36755_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 8.0e-08 62.8 87 39.1
QL03p072853 Quercus lobata HOM05D009413 ORTHO05D000116 1.0e-07 62.4 118 27.1
QL03p072862 Quercus lobata HOM05D009413 ORTHO05D000116 1.0e-07 62.4 118 27.1
QL04p089085 Quercus lobata HOM05D009413 ORTHO05D000116 1.0e-07 62.4 118 27.1
Duzib084G0708 Durio zibethinus HOM05D004287 ORTHO05D000116 1.4e-07 62.0 163 30.1
MBI12_g04512_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 1.4e-07 62.0 86 37.2
Oeu003150.1 Olea europaea HOM05D000396 ORTHO05D000116 3.0e-07 60.8 145 27.6
CANSAT35G0823 Cannabis sativa HOM05D014149 ORTHO05D004930 4.0e-07 60.5 109 33.9
Cfa010421 Carpinus fangiana HOM05D026864 ORTHO05D000116 4.0e-07 60.5 90 34.4
QL02p021994 Quercus lobata HOM05D009413 ORTHO05D000116 5.2e-07 60.1 108 33.3
QL11p042019 Quercus lobata HOM05D003372 ORTHO05D000116 6.8e-07 59.7 110 33.6
BcaC03g16751 Brassica carinata HOM05D003835 ORTHO05D004930 8.8e-07 59.3 134 29.1
Oeu052701.1 Olea europaea HOM05D002774 ORTHO05D000116 8.8e-07 59.3 150 29.3
QL04p004305 Quercus lobata HOM05D000311 ORTHO05D000183 8.8e-07 59.3 110 33.6
CANSAT25G0896 Cannabis sativa HOM05D012521 ORTHO05D011451 1.2e-06 58.9 90 34.4
Haze_18454 Corylus avellana HOM05D053650 ORTHO05D000116 1.2e-06 58.9 75 36.0
Oeu037847.1 Olea europaea HOM05D002774 ORTHO05D000116 1.2e-06 58.9 124 28.2
Oeu057510.1 Olea europaea HOM05D000784 ORTHO05D000116 1.2e-06 58.9 119 31.9
QL11p013781 Quercus lobata HOM05D001062 ORTHO05D018094 1.2e-06 58.9 104 27.9
CSS0008009 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-06 58.5 59 49.2
CSS0011309 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.5e-06 58.5 59 49.2
CANSAT54G2560 Cannabis sativa HOM05D012521 ORTHO05D011451 1.5e-06 58.5 90 34.4
BcaC08g44357 Brassica carinata HOM05D003835 ORTHO05D004930 2.0e-06 58.2 83 30.1
Oeu054768.1 Olea europaea HOM05D001586 ORTHO05D001543 2.0e-06 58.2 103 31.1
CSS0041359 Camellia sinensis var. sinensis HOM05D001381 ORTHO05D001230 3.4e-06 57.4 45 60.0
Hund29188 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 81 32.1
Hund29240 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 81 32.1
Hund30129 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 81 32.1
Hund30241 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 81 32.1
Hund30717 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 81 32.1
Hund30912 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 112 29.5
Hund31186 Selenicereus undatus HOM05D004287 ORTHO05D004569 3.4e-06 57.4 81 32.1
BcaC09g48541 Brassica carinata HOM05D003835 ORTHO05D004930 4.4e-06 57.0 109 30.3
CSS0026360 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-06 57.0 59 49.2
CSS0036579 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-06 57.0 59 49.2
CSS0036963 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 4.4e-06 57.0 59 49.2
MBI03_g13093_MAGBIO Magnolia biondii HOM05D009404 ORTHO05D000116 4.4e-06 57.0 143 29.4
Oeu014696.1 Olea europaea HOM05D000396 ORTHO05D000116 4.4e-06 57.0 162 25.9
Oeu022696.1 Olea europaea HOM05D002774 ORTHO05D000116 4.4e-06 57.0 90 34.4
Oeu049204.1 Olea europaea HOM05D002774 ORTHO05D000116 4.4e-06 57.0 143 30.8
Oeu039817.1 Olea europaea HOM05D000396 ORTHO05D000116 5.7e-06 56.6 138 28.3
Hund07973 Selenicereus undatus HOM05D004287 ORTHO05D004569 5.7e-06 56.6 81 32.1
Hund29780 Selenicereus undatus HOM05D004287 ORTHO05D004569 5.7e-06 56.6 92 31.5
CANSAT01G2537 Cannabis sativa HOM05D000034 ORTHO05D000037 7.5e-06 56.2 81 40.7
MBI08_g25565_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 7.5e-06 56.2 86 38.4
MBI16_g25249_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 7.5e-06 56.2 105 34.3
BcaB06g26790 Brassica carinata HOM05D003835 ORTHO05D004930 9.8e-06 55.8 138 28.3
MBI03_g30480_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 9.8e-06 55.8 140 32.9
MBI15_g23591_MAGBIO Magnolia biondii HOM05D008186 ORTHO05D000116 9.8e-06 55.8 63 44.4
Oeu028351.1 Olea europaea HOM05D002774 ORTHO05D000116 9.8e-06 55.8 95 32.6


User provided reference genes

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