Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015794 Camellia sinensis var. sinensis HOM05D008336 ORTHO05D010619 1.0e-103 380.2 204 100.0
Rhsim08G0049800 Rhododendron simsii HOM05D023805 ORTHO05D010384 1.1e-25 120.9 153 40.5
Atru.chr3.2966 Acer truncatum HOM05D008860 ORTHO05D010619 4.4e-22 109.0 133 39.8
Atru.chr12.1651 Acer truncatum HOM05D000096 ORTHO05D000045 9.7e-22 107.8 133 38.3
vmacro17288 Vaccinium macrocarpon HOM05D008860 ORTHO05D010619 2.0e-19 100.1 124 46.8
Atru.chr8.1160 Acer truncatum HOM05D006612 ORTHO05D010384 2.1e-16 90.1 83 50.6
CANSAT35G0072 Cannabis sativa HOM05D006612 ORTHO05D010384 1.0e-15 87.8 142 33.8
Haze_01485 Corylus avellana HOM05D006612 ORTHO05D010384 1.8e-15 87.0 91 44.0
Dinv10520 Davidia involucrata HOM05D000824 ORTHO05D010384 8.8e-15 84.7 132 32.6
Dinv26739 Davidia involucrata HOM05D000824 ORTHO05D010384 2.6e-14 83.2 132 32.6
Dinv08483 Davidia involucrata HOM05D006612 ORTHO05D010384 4.8e-13 79.0 132 31.1
Dinv30925 Davidia involucrata HOM05D000824 ORTHO05D010384 8.2e-13 78.2 132 31.1
Dinv03711 Davidia involucrata HOM05D006612 ORTHO05D010384 1.1e-12 77.8 88 40.9
Dinv41987 Davidia involucrata HOM05D000824 ORTHO05D010384 1.1e-12 77.8 132 30.3
Dinv19531 Davidia involucrata HOM05D000824 ORTHO05D010384 1.8e-12 77.0 132 31.1
Dinv38786 Davidia involucrata HOM05D006409 ORTHO05D008250 4.1e-12 75.9 123 30.9
Oeu035562.1 Olea europaea HOM05D008860 ORTHO05D010619 5.3e-12 75.5 93 43.0
vmacro04464 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 5.3e-12 75.5 184 30.4
Oeu035976.1 Olea europaea HOM05D008860 ORTHO05D010619 7.0e-12 75.1 151 34.4
CANSAT01G1154 Cannabis sativa HOM05D000824 ORTHO05D010619 1.2e-11 74.3 138 31.2
CANSAT01G2695 Cannabis sativa HOM05D008860 ORTHO05D010384 1.2e-11 74.3 83 39.8
Dinv06234 Davidia involucrata HOM05D006612 ORTHO05D010384 1.6e-11 73.9 87 37.9
CANSAT80G1395 Cannabis sativa HOM05D008860 ORTHO05D010619 2.0e-11 73.6 93 39.8
vmacro23315 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 3.5e-11 72.8 175 28.6
CiPaw.01G012000 Carya illinoinensis HOM05D000096 ORTHO05D000045 5.9e-11 72.0 92 37.0
Haze_10826 Corylus avellana HOM05D006612 ORTHO05D010384 7.7e-11 71.6 91 38.5
vmacro21104 Vaccinium macrocarpon HOM05D008336 ORTHO05D008997 1.7e-10 70.5 183 25.7
Oeu031675.3 Olea europaea HOM05D008860 ORTHO05D010619 5.0e-10 68.9 147 30.6
Oeu011439.1 Olea europaea HOM05D008860 ORTHO05D010619 8.5e-10 68.2 133 34.6
Cc10_g10270 Coffea canephora HOM05D017605 ORTHO05D009014 1.1e-09 67.8 91 40.7
TAR369G0863 Trochodendron aralioides HOM05D000674 ORTHO05D001490 7.2e-09 65.1 92 33.7
vmacro10190 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.2e-08 64.3 178 27.5
vmacro23524 Vaccinium macrocarpon HOM05D008336 ORTHO05D011831 1.2e-08 64.3 178 27.5
AUR62040886 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.7e-08 62.4 161 27.3
AUR62022516 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.0e-08 61.6 86 30.2
AUR62044333 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.0e-08 61.6 86 30.2
Cc01_g08090 Coffea canephora HOM05D017605 ORTHO05D025121 1.0e-07 61.2 145 26.9
AUR62022786 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.8e-07 60.5 85 32.9
AUR62036953 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.3e-07 60.1 124 25.0
Atru.chr4.2122 Acer truncatum HOM05D002751 ORTHO05D003005 3.0e-07 59.7 51 47.1
AUR62034168 Chenopodium quinoa HOM05D003315 ORTHO05D003407 5.2e-07 58.9 86 30.2
AUR62040248 Chenopodium quinoa HOM05D001005 ORTHO05D000836 5.2e-07 58.9 161 24.8
CANSAT11G0124 Cannabis sativa HOM05D009267 ORTHO05D010384 6.8e-07 58.5 123 27.6
AUR62028024 Chenopodium quinoa HOM05D003315 ORTHO05D003407 8.8e-07 58.2 77 32.5
EL10Ac7g18197 Beta vulgaris HOM05D003315 ORTHO05D003407 1.2e-06 57.8 92 29.3
AUR62009030 Chenopodium quinoa HOM05D002094 ORTHO05D002113 1.2e-06 57.8 85 30.6
AUR62034102 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.2e-06 57.8 126 31.0
AUR62043068 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.2e-06 57.8 84 32.1
Nitab4.5_0000517g0100 Nicotiana tabacum HOM05D002261 ORTHO05D002334 1.2e-06 57.8 141 24.1
Sp6g34920 Schrenkiella parvula HOM05D000824 ORTHO05D003555 1.2e-06 57.8 136 25.0
AUR62040149 Chenopodium quinoa HOM05D003315 ORTHO05D003407 1.5e-06 57.4 146 27.4
HanXRQChr02g0044771 Helianthus annuus HOM05D000824 ORTHO05D003555 1.5e-06 57.4 137 24.8
Cc07_g18580 Coffea canephora HOM05D006612 ORTHO05D009014 2.0e-06 57.0 175 29.1
Actinidia03272 Actinidia chinensis HOM05D006612 ORTHO05D010619 2.6e-06 56.6 138 26.1
AUR62018076 Chenopodium quinoa HOM05D003315 ORTHO05D003407 2.6e-06 56.6 97 32.0
Nitab4.5_0003673g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 2.6e-06 56.6 118 26.3
SGA_v2.0_scaffold319G48529 Striga asiatica HOM05D006612 ORTHO05D009014 2.6e-06 56.6 96 32.3
AUR62025720 Chenopodium quinoa HOM05D003315 ORTHO05D003407 4.4e-06 55.8 146 25.3
Lsat_1_v5_gn_1_14461 Lactuca sativa HOM05D000824 ORTHO05D003555 4.4e-06 55.8 120 30.0
Nitab4.5_0001280g0040 Nicotiana tabacum HOM05D002261 ORTHO05D002334 4.4e-06 55.8 101 29.7
SGA_v2.0_scaffold135G34887 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-06 55.5 97 29.9
SGA_v2.0_scaffold511G52629 Striga asiatica HOM05D006612 ORTHO05D009014 5.7e-06 55.5 97 29.9
AUR62013260 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.5e-06 55.1 90 28.9
AUR62044123 Chenopodium quinoa HOM05D003315 ORTHO05D003407 7.5e-06 55.1 90 28.9
Cc04_g13910 Coffea canephora HOM05D006612 ORTHO05D009014 7.5e-06 55.1 177 26.6
Nitab4.5_0011520g0010 Nicotiana tabacum HOM05D002261 ORTHO05D002334 7.5e-06 55.1 90 34.4
vmacro21837 Vaccinium macrocarpon HOM05D000894 ORTHO05D002325 7.5e-06 55.1 83 36.1


User provided reference genes

Program Settings