Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015728 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 2.6e-59 231.9 121 100.0
Haze_00371 Corylus avellana HOM05D005039 ORTHO05D006145 5.9e-43 177.6 120 80.8
Cfa016075 Carpinus fangiana HOM05D005039 ORTHO05D006145 7.3e-33 144.1 76 96.1
CiPaw.05G212800 Carya illinoinensis HOM05D005039 ORTHO05D006145 7.3e-33 144.1 76 96.1
Dinv29126 Davidia involucrata HOM05D005039 ORTHO05D006145 7.3e-33 144.1 76 96.1
Manes.08G160900 Manihot esculenta HOM05D005039 ORTHO05D006145 7.3e-33 144.1 76 96.1
CSS0032758 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 9.5e-33 143.7 78 94.9
Aqoxy1G03063 Aquilegia oxysepala HOM05D005039 ORTHO05D006145 1.6e-32 142.9 76 94.7
Duzib106G2059 Durio zibethinus HOM05D005039 ORTHO05D006145 1.6e-32 142.9 76 94.7
Nn3g19238 Nelumbo nucifera HOM05D005039 ORTHO05D006145 1.6e-32 142.9 76 94.7
Thecc.05G222600 Theobroma cacao HOM05D005039 ORTHO05D006145 1.6e-32 142.9 76 94.7
EL10Ac3g05043 Beta vulgaris HOM05D005039 ORTHO05D006145 2.1e-32 142.5 76 94.7
MELO3C021899.2 Cucumis melo HOM05D005039 ORTHO05D006145 2.1e-32 142.5 76 93.4
CsaV3_2G014060 Cucumis sativus L. HOM05D005039 ORTHO05D006145 2.1e-32 142.5 76 93.4
Oeu027894.4 Olea europaea HOM05D005039 ORTHO05D006145 2.1e-32 142.5 131 64.1
Rhsim03G0224300 Rhododendron simsii HOM05D005039 ORTHO05D006145 2.1e-32 142.5 76 94.7
vmacro06372 Vaccinium macrocarpon HOM05D005039 ORTHO05D006145 2.1e-32 142.5 76 94.7
Atru.chr12.1876 Acer truncatum HOM05D005039 ORTHO05D006145 2.8e-32 142.1 76 93.4
AUR62002093 Chenopodium quinoa HOM05D005039 ORTHO05D006145 3.6e-32 141.7 76 93.4
ClCG09G017310 Citrullus lanatus HOM05D005039 ORTHO05D006145 3.6e-32 141.7 76 92.1
Gohir.A02G125900 Gossypium hirsutum HOM05D005039 ORTHO05D006145 3.6e-32 141.7 76 92.1
Gohir.D03G054700 Gossypium hirsutum HOM05D005039 ORTHO05D006145 3.6e-32 141.7 76 92.1
Gorai.003G057600 Gossypium raimondii HOM05D005039 ORTHO05D006145 3.6e-32 141.7 76 92.1
Sc13g0011000 Simmondsia chinensis HOM05D005039 ORTHO05D006145 3.6e-32 141.7 100 78.0
TAR629G1612 Trochodendron aralioides HOM05D005039 ORTHO05D006145 3.6e-32 141.7 76 92.1
ATR0829G179 Amborella trichopoda HOM05D005039 ORTHO05D006145 4.7e-32 141.4 76 94.7
AUR62028211 Chenopodium quinoa HOM05D005039 ORTHO05D006145 4.7e-32 141.4 76 93.4
Cc02_g00100 Coffea canephora HOM05D005039 ORTHO05D006145 4.7e-32 141.4 76 93.4
Duzib128G1855 Durio zibethinus HOM05D005039 ORTHO05D006145 4.7e-32 141.4 76 93.4
CANSAT21G2526 Cannabis sativa HOM05D005039 ORTHO05D006145 6.1e-32 141.0 76 93.4
SGA_v2.0_scaffold188G40301 Striga asiatica HOM05D005039 ORTHO05D006145 6.1e-32 141.0 76 92.1
GSVIVG01024328001 Vitis vinifera HOM05D005039 ORTHO05D006145 6.1e-32 141.0 76 92.1
CSS0008859 Camellia sinensis var. sinensis HOM05D005039 ORTHO05D006145 8.0e-32 140.6 76 93.4
Migut.C00159 Erythranthe guttata HOM05D005039 ORTHO05D006145 8.0e-32 140.6 83 85.5
Eucgr.K00067 Eucalyptus grandis HOM05D005039 ORTHO05D006145 8.0e-32 140.6 76 92.1
MBI04_g12218_MAGBIO Magnolia biondii HOM05D005039 ORTHO05D006145 8.0e-32 140.6 76 93.4
Actinidia08765 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.0e-31 140.2 76 93.4
Glyma.11G109900 Glycine max HOM05D005039 ORTHO05D006145 1.0e-31 140.2 76 93.4
Potri.013G077700 Populus trichocarpa HOM05D005039 ORTHO05D006145 1.0e-31 140.2 76 90.8
Sabra13G0066500 Salix brachista HOM05D005039 ORTHO05D006145 1.0e-31 140.2 76 90.8
Ciclev10031435m.g Citrus clementina HOM05D005039 ORTHO05D006145 1.4e-31 139.8 76 92.1
QL09p020758 Quercus lobata HOM05D005039 ORTHO05D006145 1.4e-31 139.8 76 93.4
Sed0001134 Sechium edule HOM05D005039 ORTHO05D006145 1.4e-31 139.8 76 90.8
Hund09811 Selenicereus undatus HOM05D005039 ORTHO05D006145 1.8e-31 139.4 82 87.8
Nn1g02122 Nelumbo nucifera HOM05D005039 ORTHO05D006145 2.3e-31 139.0 76 93.4
PGR142G1194 Punica granatum HOM05D005039 ORTHO05D006145 2.3e-31 139.0 76 90.8
MD07G1310900 Malus domestica HOM05D005039 ORTHO05D006145 3.0e-31 138.7 75 92.0
TWI79G0887 Tripterygium wilfordii HOM05D005039 ORTHO05D006145 3.0e-31 138.7 76 90.8
MSTRG.24939 Avicennia marina HOM05D005039 ORTHO05D006145 4.0e-31 138.3 76 89.5
DCAR_020429 Daucus carota HOM05D005039 ORTHO05D006145 4.0e-31 138.3 76 90.8
FvH4_7g34230 Fragaria vesca HOM05D005039 ORTHO05D006145 4.0e-31 138.3 76 90.8
FAN01G1789 Fragaria x ananassa HOM05D005039 ORTHO05D006145 4.0e-31 138.3 76 90.8
FAN03G0337 Fragaria x ananassa HOM05D005039 ORTHO05D006145 4.0e-31 138.3 76 90.8
RcHm_v2.0_Chr1g0384591 Rosa chinensis HOM05D005039 ORTHO05D006145 4.0e-31 138.3 75 92.0
Ca_26497_v3 Cicer arietinum L. HOM05D005039 ORTHO05D006145 5.2e-31 137.9 83 84.3
HPP92_014410 Vanilla planifolia HOM05D005039 ORTHO05D006145 5.2e-31 137.9 76 90.8
arahy.Tifrunner.gnm1.ann1.GG16T8 Arachis hypogaea HOM05D005039 ORTHO05D006145 6.8e-31 137.5 83 83.1
arahy.Tifrunner.gnm1.ann1.IZT0PT Arachis hypogaea HOM05D005039 ORTHO05D006145 6.8e-31 137.5 83 83.1
Medtr5g005440 Medicago truncatula HOM05D005039 ORTHO05D006145 6.8e-31 137.5 76 89.5
FAN10G2688 Fragaria x ananassa HOM05D005039 ORTHO05D006145 8.9e-31 137.1 76 89.5
Nitab4.5_0006992g0040 Nicotiana tabacum HOM05D005039 ORTHO05D006145 8.9e-31 137.1 76 88.2
Nitab4.5_0009864g0010 Nicotiana tabacum HOM05D005039 ORTHO05D006145 8.9e-31 137.1 76 88.2
Sp5g19320 Schrenkiella parvula HOM05D005039 ORTHO05D006145 8.9e-31 137.1 76 86.8
AT1G64990 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 1.2e-30 136.7 76 86.8
C02p21070 Brassica napus HOM05D005039 ORTHO05D006145 1.5e-30 136.3 76 86.8
BolC2t08248H Brassica oleracea HOM05D005039 ORTHO05D006145 1.5e-30 136.3 76 86.8
BraA02t06350Z Brassica rapa HOM05D005039 ORTHO05D006145 1.5e-30 136.3 76 86.8
Aa31LG2G2190 Aethionema arabicum HOM05D005039 ORTHO05D006145 2.0e-30 136.0 76 86.8
Ah.13g072370 Amaranthus hybridus HOM05D005039 ORTHO05D006145 2.0e-30 136.0 76 92.1
Carub.0002s1015 Capsella rubella HOM05D005039 ORTHO05D006145 2.0e-30 136.0 76 86.8
CARHR056390 Cardamine hirsuta HOM05D005039 ORTHO05D006145 2.0e-30 136.0 76 86.8
Glyma.12G014800 Glycine max HOM05D005039 ORTHO05D006145 2.0e-30 136.0 76 90.8
Lj3g0003232 Lotus japonicus HOM05D005039 ORTHO05D006145 2.0e-30 136.0 76 90.8
Phvul.011G017800 Phaseolus vulgaris HOM05D005039 ORTHO05D006145 2.0e-30 136.0 83 84.3
Psat7g155320 Pisum sativum HOM05D005039 ORTHO05D006145 2.0e-30 136.0 75 89.3
AL2G19600 Arabidopsis lyrata HOM05D005039 ORTHO05D006145 2.6e-30 135.6 76 85.5
Thhalv10025115m.g Eutrema salsugineum HOM05D005039 ORTHO05D006145 3.4e-30 135.2 83 80.7
VMungo1127G0275 Vigna mungo HOM05D005039 ORTHO05D006145 3.4e-30 135.2 83 84.3
BcaNung01651 Brassica carinata HOM05D005039 ORTHO05D006145 4.4e-30 134.8 76 85.5
Peaxi162Scf00802g00029 Petunia axillaris HOM05D005039 ORTHO05D006145 4.4e-30 134.8 76 85.5
THA.LOC104805716 Tarenaya hassleriana HOM05D005039 ORTHO05D006145 4.4e-30 134.8 76 85.5
Lalb_Chr09g0320081 Lupinus albus HOM05D005039 ORTHO05D006145 5.7e-30 134.4 83 81.9
BcaB05g25317 Brassica carinata HOM05D005039 ORTHO05D006145 7.5e-30 134.0 76 85.5
SalBow7G2894 Salvia bowleyana HOM05D005039 ORTHO05D006145 7.5e-30 134.0 83 79.5
Solyc07g045330.3 Solanum lycopersicum HOM05D005039 ORTHO05D006145 7.5e-30 134.0 76 86.8
Sopen07g023860 Solanum pennellii HOM05D005039 ORTHO05D006145 7.5e-30 134.0 76 86.8
CARHR235330 Cardamine hirsuta HOM05D005039 ORTHO05D006145 9.8e-30 133.7 83 78.3
ECA232G0266 Erigeron canadensis HOM05D005039 ORTHO05D006145 9.8e-30 133.7 76 86.8
Lsat_1_v5_gn_9_47921 Lactuca sativa HOM05D005039 ORTHO05D006145 9.8e-30 133.7 100 72.0
Sp7g25580 Schrenkiella parvula HOM05D005039 ORTHO05D006145 9.8e-30 133.7 83 79.5
HanXRQChr16g0512151 Helianthus annuus HOM05D005039 ORTHO05D006145 1.3e-29 133.3 76 86.8
Os04g0600800 Oryza sativa ssp. japonica HOM05D005039 ORTHO05D006145 1.3e-29 133.3 83 83.1
PSO063G4466 Papaver somniferum HOM05D005039 ORTHO05D006145 1.3e-29 133.3 76 90.8
PSO782G0889 Papaver somniferum HOM05D005039 ORTHO05D006145 1.3e-29 133.3 76 90.8
CAN.G437.12 Capsicum annuum HOM05D005039 ORTHO05D006145 1.7e-29 132.9 76 85.5
AT4G27630 Arabidopsis thaliana HOM05D005039 ORTHO05D006145 3.7e-29 131.7 83 80.7
BcaC09g50566 Brassica carinata HOM05D005039 ORTHO05D006145 3.7e-29 131.7 83 77.1
A01p18920 Brassica napus HOM05D005039 ORTHO05D006145 3.7e-29 131.7 83 77.1
A02p12960 Brassica napus HOM05D005039 ORTHO05D006145 3.7e-29 131.7 77 85.7
C01p23870 Brassica napus HOM05D005039 ORTHO05D006145 3.7e-29 131.7 83 77.1
BolC1t02332H Brassica oleracea HOM05D005039 ORTHO05D006145 3.7e-29 131.7 83 77.1
BraA01t01833Z Brassica rapa HOM05D005039 ORTHO05D006145 3.7e-29 131.7 83 77.1
Carub.0007s1322 Capsella rubella HOM05D005039 ORTHO05D006145 6.4e-29 131.0 83 80.7
Zm00001eb430290 Zea mays HOM05D005039 ORTHO05D006145 8.3e-29 130.6 83 80.7
PGSC0003DMG402017405 Solanum tuberosum HOM05D005039 ORTHO05D006145 1.1e-28 130.2 77 84.4
MD01G1239200 Malus domestica HOM05D005039 ORTHO05D006145 1.6e-27 126.3 75 86.7
SMO304G0068 Selaginella moellendorffii HOM05D005039 ORTHO05D006145 1.6e-27 126.3 75 78.7
Actinidia24520 Actinidia chinensis HOM05D005039 ORTHO05D006145 1.7e-26 122.9 67 92.5
Mapoly0094s0006 Marchantia polymorpha HOM05D005039 ORTHO05D006145 3.0e-26 122.1 76 77.6
CBR_g72647 Chara braunii HOM05D005039 ORTHO05D006145 5.0e-26 121.3 100 65.0
AagrBONN_evm.TU.Sc2ySwM_117.727 Anthoceros agrestis HOM05D005039 ORTHO05D006145 8.0e-24 114.0 76 65.8
Prupe.2G329100 Prunus persica HOM05D005039 ORTHO05D006145 2.9e-21 105.5 53 98.1
Carub.0008s0531 Capsella rubella HOM05D005039 ORTHO05D006145 1.5e-14 83.2 47 87.2
Cpa.g.sc43.133 Carica papaya HOM05D005039 ORTHO05D006145 4.4e-14 81.6 42 97.6
EL10Ac7g16242 Beta vulgaris HOM05D005039 ORTHO05D006145 1.7e-13 79.7 41 97.6
unitig_0.g2070 Utricularia gibba HOM05D005039 ORTHO05D006145 1.7e-13 79.7 72 59.7
Cre16.g674739 Chlamydomonas reinhardtii HOM05D005039 ORTHO05D006145 7.1e-12 74.3 101 43.6
AagrBONN_evm.TU.Sc2ySwM_369.165 Anthoceros agrestis HOM05D005039 ORTHO05D006145 9.2e-12 73.9 41 82.9
CDE11G0732 Ceratophyllum demersum HOM05D005039 ORTHO05D006145 1.6e-11 73.2 37 100.0
Lj3A884T54 Lonicera japonica HOM05D005039 ORTHO05D006145 3.5e-11 72.0 37 97.3
COL.COLO4_15139 Corchorus olitorius HOM05D005039 ORTHO05D006145 6.0e-11 71.2 37 94.6
Carub.0008s0533 Capsella rubella HOM05D005039 ORTHO05D006145 3.0e-10 68.9 37 91.9
PRCOL_00000150 Prasinoderma coloniale HOM05D005039 ORTHO05D006145 1.5e-06 56.6 99 42.4


User provided reference genes

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