Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015714 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 7.3e-36 153.7 96 100.0
Dinv30037 Davidia involucrata HOM05D008343 ORTHO05D009841 7.3e-12 73.9 65 58.5
CSS0026698 Camellia sinensis var. sinensis HOM05D008343 ORTHO05D009841 1.6e-11 72.8 74 58.1
Potri.007G049500 Populus trichocarpa HOM05D008343 ORTHO05D009841 4.7e-11 71.2 71 57.7
Eucgr.H02229 Eucalyptus grandis HOM05D008343 ORTHO05D009841 6.2e-11 70.9 89 59.6
MD02G1179300 Malus domestica HOM05D008343 ORTHO05D009841 8.1e-11 70.5 65 60.0
Prupe.6G228500 Prunus persica HOM05D008343 ORTHO05D009841 8.1e-11 70.5 64 60.9
Eucgr.H02234 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.1e-10 70.1 65 53.8
Eucgr.H02237 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.1e-10 70.1 65 53.8
Eucgr.H01292 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.4e-10 69.7 65 53.8
Eucgr.H02236 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.8e-10 69.3 68 51.5
Eucgr.H02240 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.8e-10 69.3 65 53.8
Potri.007G049400 Populus trichocarpa HOM05D008343 ORTHO05D009841 1.8e-10 69.3 71 60.6
Potri.016G015600 Populus trichocarpa HOM05D008343 ORTHO05D009841 3.1e-10 68.6 71 52.1
Potri.005G142900 Populus trichocarpa HOM05D008343 ORTHO05D009841 5.2e-10 67.8 70 52.9
Dinv26871 Davidia involucrata HOM05D008343 ORTHO05D009841 8.9e-10 67.0 66 57.6
Eucgr.H02233 Eucalyptus grandis HOM05D008343 ORTHO05D009841 8.9e-10 67.0 68 50.0
Potri.006G008066 Populus trichocarpa HOM05D008343 ORTHO05D009841 8.9e-10 67.0 71 53.5
MD15G1289400 Malus domestica HOM05D014781 ORTHO05D009841 1.2e-09 66.6 64 53.1
Eucgr.H01293 Eucalyptus grandis HOM05D008343 ORTHO05D009841 1.5e-09 66.2 68 50.0
TAR376G0584 Trochodendron aralioides HOM05D008343 ORTHO05D009841 2.0e-09 65.9 68 54.4
GSVIVG01000214001 Vitis vinifera HOM05D008343 ORTHO05D009841 2.0e-09 65.9 64 54.7
Nn1g04695 Nelumbo nucifera HOM05D008343 ORTHO05D009841 2.6e-09 65.5 68 54.4
Hma1.2p1_0239F.1_g099990 Hydrangea macrophylla HOM05D008343 ORTHO05D009841 4.4e-09 64.7 55 60.0
Manes.12G110633 Manihot esculenta HOM05D008343 ORTHO05D009841 4.4e-09 64.7 59 61.0
Haze_15346 Corylus avellana HOM05D008343 ORTHO05D009841 5.8e-09 64.3 57 63.2
Eucgr.H02243 Eucalyptus grandis HOM05D008343 ORTHO05D009841 5.8e-09 64.3 65 50.8
TAR376G0451 Trochodendron aralioides HOM05D008343 ORTHO05D009841 5.8e-09 64.3 57 57.9
CiPaw.02G005800 Carya illinoinensis HOM05D008343 ORTHO05D009841 7.6e-09 63.9 61 50.8
QL06p040048 Quercus lobata HOM05D008343 ORTHO05D009841 9.9e-09 63.5 80 48.8
Sabra06G0006300 Salix brachista HOM05D008343 ORTHO05D009841 2.9e-08 62.0 70 51.4
Thecc.01G063900 Theobroma cacao HOM05D018273 ORTHO05D009841 4.9e-08 61.2 72 54.2
Aqoxy6G02858 Aquilegia oxysepala HOM05D008343 ORTHO05D009841 8.4e-08 60.5 75 42.7
FAN28G1184 Fragaria x ananassa HOM05D014781 ORTHO05D009841 8.4e-08 60.5 70 45.7
Cfa004065 Carpinus fangiana HOM05D008343 ORTHO05D009841 1.1e-07 60.1 63 54.0
FAN28G2323 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.1e-07 60.1 70 45.7
Cpa.g.sc6.93 Carica papaya HOM05D008343 ORTHO05D009841 1.4e-07 59.7 65 50.8
Dinv30038 Davidia involucrata HOM05D008343 ORTHO05D009841 1.9e-07 59.3 61 57.4
Nn1g04691 Nelumbo nucifera HOM05D008343 ORTHO05D009841 2.4e-07 58.9 65 52.3
VMungo0251G2240 Vigna mungo HOM05D008343 ORTHO05D009841 3.2e-07 58.5 74 44.6
Nn1g04690 Nelumbo nucifera HOM05D008343 ORTHO05D271030 4.2e-07 58.2 76 51.3
Phvul.003G239800 Phaseolus vulgaris HOM05D008343 ORTHO05D009841 4.2e-07 58.2 69 47.8
QL06p040052 Quercus lobata HOM05D008343 ORTHO05D009841 5.4e-07 57.8 61 50.8
GSVIVG01032935001 Vitis vinifera HOM05D000114 ORTHO05D000075 1.2e-06 56.6 63 55.6
FvH4_1g16830 Fragaria vesca HOM05D014781 ORTHO05D009841 1.6e-06 56.2 66 45.5
FAN19G0512 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.6e-06 56.2 66 45.5
FAN26G0261 Fragaria x ananassa HOM05D014781 ORTHO05D009841 1.6e-06 56.2 66 45.5
RcHm_v2.0_Chr1g0340091 Rosa chinensis HOM05D014781 ORTHO05D009841 1.6e-06 56.2 60 53.3
Glyma.17G166600 Glycine max HOM05D008343 ORTHO05D009841 2.1e-06 55.8 75 48.0
Peaxi162Scf00365g00064 Petunia axillaris HOM05D011430 ORTHO05D009841 2.1e-06 55.8 89 52.8
Gorai.011G257600 Gossypium raimondii HOM05D018273 ORTHO05D009841 2.7e-06 55.5 68 51.5
Peaxi162Scf00365g00065 Petunia axillaris HOM05D011430 ORTHO05D009841 2.7e-06 55.5 89 53.9
Lalb_Chr16g0388911 Lupinus albus HOM05D008343 ORTHO05D009841 4.6e-06 54.7 71 40.8
BcaC01g00413 Brassica carinata HOM05D008734 ORTHO05D010780 7.8e-06 53.9 63 44.4
C03p79450 Brassica napus HOM05D008734 ORTHO05D010780 7.8e-06 53.9 63 44.4
BraA08t34221Z Brassica rapa HOM05D008734 ORTHO05D010780 7.8e-06 53.9 63 44.4
RcHm_v2.0_Chr2g0106731 Rosa chinensis HOM05D014781 ORTHO05D009841 7.8e-06 53.9 62 50.0
TAR376G0088 Trochodendron aralioides HOM05D008343 ORTHO05D009841 7.8e-06 53.9 50 56.0


User provided reference genes

Program Settings