Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015692 Camellia sinensis var. sinensis HOM05D007596 ORTHO05D009672 4.0e-153 544.7 264 100.0
Rhsim12G0163300 Rhododendron simsii HOM05D007596 ORTHO05D009672 9.6e-131 470.3 264 83.3
vmacro16599 Vaccinium macrocarpon HOM05D007596 ORTHO05D009672 2.2e-127 459.1 264 81.8
Lj9A451T97 Lonicera japonica HOM05D007596 ORTHO05D009672 4.1e-121 438.3 264 76.9
GSVIVG01007788001 Vitis vinifera HOM05D007596 ORTHO05D009672 2.2e-114 416.0 264 74.2
Hma1.2p1_0701F.1_g205970 Hydrangea macrophylla HOM05D007596 ORTHO05D009672 2.8e-114 415.6 262 74.8
EL10Ac5g10784 Beta vulgaris HOM05D007596 ORTHO05D009672 1.1e-113 413.7 264 72.3
CiPaw.11G029100 Carya illinoinensis HOM05D007596 ORTHO05D009672 1.1e-113 413.7 253 75.1
DCAR_026124 Daucus carota HOM05D007596 ORTHO05D009672 1.4e-113 413.3 262 71.8
Eucgr.K02859 Eucalyptus grandis HOM05D007596 ORTHO05D009672 1.4e-113 413.3 270 72.6
Cc04_g12800 Coffea canephora HOM05D007596 ORTHO05D009672 4.1e-113 411.8 264 73.5
Oeu041561.1 Olea europaea HOM05D007596 ORTHO05D009672 6.9e-113 411.0 264 71.2
SGA_v2.0_scaffold90G27960 Striga asiatica HOM05D007596 ORTHO05D009672 6.9e-113 411.0 264 72.0
TAR374G1438 Trochodendron aralioides HOM05D007596 ORTHO05D009672 5.0e-111 404.8 264 71.2
MSTRG.11436 Avicennia marina HOM05D007596 ORTHO05D009672 1.4e-110 403.3 264 71.2
TWI15G1048 Tripterygium wilfordii HOM05D007596 ORTHO05D009672 3.6e-109 398.7 264 71.2
MBI15_g31109_MAGBIO Magnolia biondii HOM05D007596 ORTHO05D009672 7.9e-109 397.5 265 70.9
Duzib205G0154 Durio zibethinus HOM05D007596 ORTHO05D009672 6.7e-108 394.4 264 69.7
Hund02735 Selenicereus undatus HOM05D007596 ORTHO05D009672 8.8e-108 394.0 263 74.1
Migut.I00032 Erythranthe guttata HOM05D007596 ORTHO05D009672 1.5e-107 393.3 266 70.3
HanXRQChr16g0503661 Helianthus annuus HOM05D007596 ORTHO05D009672 3.3e-107 392.1 250 72.4
Aqoxy3G00967 Aquilegia oxysepala HOM05D007596 ORTHO05D009672 9.7e-107 390.6 262 69.1
SalBow5G3112 Salvia bowleyana HOM05D007596 ORTHO05D009672 9.7e-107 390.6 265 69.8
PSO063G6591 Papaver somniferum HOM05D007596 ORTHO05D009672 1.3e-106 390.2 264 68.6
Thecc.03G008700 Theobroma cacao HOM05D007596 ORTHO05D009672 2.2e-106 389.4 264 68.6
CANSAT80G2510 Cannabis sativa HOM05D007596 ORTHO05D009672 2.8e-106 389.0 264 68.2
Nitab4.5_0000003g0490 Nicotiana tabacum HOM05D007596 ORTHO05D009672 3.7e-106 388.7 253 70.4
Potri.012G078600 Populus trichocarpa HOM05D007596 ORTHO05D009672 8.2e-106 387.5 265 69.8
Nitab4.5_0007803g0020 Nicotiana tabacum HOM05D007596 ORTHO05D009672 1.1e-105 387.1 253 70.4
Ciclev10021737m.g Citrus clementina HOM05D007596 ORTHO05D009672 3.1e-105 385.6 254 71.3
CsaV3_1G008350 Cucumis sativus L. HOM05D007596 ORTHO05D009672 7.0e-105 384.4 264 69.3
PGSC0003DMG400027097 Solanum tuberosum HOM05D007596 ORTHO05D009672 9.1e-105 384.0 253 69.6
Atru.chr9.2439 Acer truncatum HOM05D007596 ORTHO05D009672 1.2e-104 383.6 253 71.5
Dinv20674 Davidia involucrata HOM05D007596 ORTHO05D009672 1.2e-104 383.6 219 81.7
Nn4g22825 Nelumbo nucifera HOM05D007596 ORTHO05D009672 2.0e-104 382.9 257 70.0
Sopen06g027660 Solanum pennellii HOM05D007596 ORTHO05D009672 2.0e-104 382.9 253 70.0
ClCG01G013000 Citrullus lanatus HOM05D007596 ORTHO05D009672 3.5e-104 382.1 253 69.6
Solyc06g071380.3 Solanum lycopersicum HOM05D007596 ORTHO05D009672 4.5e-104 381.7 253 70.4
Manes.06G103100 Manihot esculenta HOM05D007596 ORTHO05D009672 7.7e-104 380.9 265 69.4
PGR044G0668 Punica granatum HOM05D007596 ORTHO05D009672 1.3e-103 380.2 256 69.5
Lj4g0018893 Lotus japonicus HOM05D007596 ORTHO05D009672 8.5e-103 377.5 265 66.4
ECA232G2922 Erigeron canadensis HOM05D007596 ORTHO05D009672 5.5e-102 374.8 253 67.2
HPP92_019181 Vanilla planifolia HOM05D007596 ORTHO05D009672 9.4e-102 374.0 267 68.2
Psat4g056920 Pisum sativum HOM05D007596 ORTHO05D009672 2.1e-101 372.9 267 67.0
RcHm_v2.0_Chr7g0193891 Rosa chinensis HOM05D007596 ORTHO05D009672 3.6e-101 372.1 258 68.2
Gohir.A09G169500 Gossypium hirsutum HOM05D007596 ORTHO05D009672 1.0e-100 370.5 253 67.6
Gorai.006G187000 Gossypium raimondii HOM05D007596 ORTHO05D009672 1.0e-100 370.5 253 67.6
Phvul.003G198900 Phaseolus vulgaris HOM05D007596 ORTHO05D009672 2.0e-99 366.3 265 65.3
FAN13G0067 Fragaria x ananassa HOM05D007596 ORTHO05D009672 4.4e-99 365.2 264 65.9
Sed0010804 Sechium edule HOM05D007596 ORTHO05D009672 7.5e-99 364.4 264 65.2
FAN18G0106 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.3e-98 363.6 264 65.5
FvH4_5g05110 Fragaria vesca HOM05D007596 ORTHO05D009672 1.7e-98 363.2 264 65.2
FAN08G2413 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.7e-98 363.2 264 65.5
Glyma.05G036200 Glycine max HOM05D007596 ORTHO05D009672 2.2e-98 362.8 255 65.5
MD06G1177600 Malus domestica HOM05D007596 ORTHO05D009672 1.1e-97 360.5 253 68.0
Medtr4g106630 Medicago truncatula HOM05D007596 ORTHO05D009672 1.1e-97 360.5 263 64.6
Lalb_Chr13g0297881 Lupinus albus HOM05D007596 ORTHO05D009672 1.2e-96 357.1 269 64.7
Sabra12G0056400 Salix brachista HOM05D007596 ORTHO05D009672 3.5e-96 355.5 307 59.0
arahy.Tifrunner.gnm1.ann1.3E9X4W Arachis hypogaea HOM05D007596 ORTHO05D009672 6.5e-95 351.3 265 63.0
arahy.Tifrunner.gnm1.ann1.8F9XT7 Arachis hypogaea HOM05D007596 ORTHO05D009672 6.5e-95 351.3 265 63.0
FAN18G0038 Fragaria x ananassa HOM05D007596 ORTHO05D009672 8.8e-92 340.9 256 63.7
Cfa019092 Carpinus fangiana HOM05D007596 ORTHO05D009672 4.4e-91 338.6 210 75.2
COL.COLO4_34057 Corchorus olitorius HOM05D007596 ORTHO05D009672 7.5e-91 337.8 268 62.7
Psat4g101560 Pisum sativum HOM05D007596 ORTHO05D009672 1.7e-90 336.7 254 63.0
PSO832G1789 Papaver somniferum HOM05D007596 ORTHO05D009672 4.1e-89 332.0 225 67.6
TPR.G37562 Trifolium pratense HOM05D007596 ORTHO05D009672 1.0e-87 327.4 266 59.0
Lsat_1_v5_gn_4_73100 Lactuca sativa HOM05D007596 ORTHO05D009672 1.7e-87 326.6 250 62.0
Peaxi162Scf00689g00036 Petunia axillaris HOM05D007596 ORTHO05D009672 1.7e-87 326.6 253 62.1
ATR0691G114 Amborella trichopoda HOM05D007596 ORTHO05D009672 1.7e-82 310.1 217 65.9
Gohir.D09G165200 Gossypium hirsutum HOM05D007596 ORTHO05D009672 3.7e-82 308.9 253 59.3
Os04g0465800 Oryza sativa ssp. japonica HOM05D007596 ORTHO05D009672 2.0e-80 303.1 228 64.0
Zm00001eb080350 Zea mays HOM05D007596 ORTHO05D009672 3.5e-80 302.4 219 65.3
VMungo1215G2651 Vigna mungo HOM05D007596 ORTHO05D009672 8.6e-79 297.7 266 56.8
Prupe.5G176300 Prunus persica HOM05D007596 ORTHO05D009672 5.6e-70 268.5 178 70.2
Sc04g0001910 Simmondsia chinensis HOM05D007596 ORTHO05D009672 2.1e-69 266.5 179 68.2
Ca_21906_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 6.8e-60 235.0 211 55.0
Ca_21924_v3 Cicer arietinum L. HOM05D007596 ORTHO05D009672 6.8e-60 235.0 211 55.0
SMO347G0014 Selaginella moellendorffii HOM05D007596 ORTHO05D009672 8.1e-53 211.5 179 55.3
unitig_26.g8797 Utricularia gibba HOM05D007596 ORTHO05D009672 1.4e-52 210.7 283 43.8
CiPaw.11G029000 Carya illinoinensis HOM05D007596 ORTHO05D009672 6.8e-52 208.4 121 80.2
Ah.13g077910 Amaranthus hybridus HOM05D007596 ORTHO05D004562 3.4e-51 206.1 181 56.9
Glyma.17G091200 Glycine max HOM05D007596 ORTHO05D009672 3.4e-51 206.1 203 51.7
QL10p012241 Quercus lobata HOM05D007596 ORTHO05D009672 3.4e-51 206.1 132 68.2
SGA_v2.0_scaffold90G27962 Striga asiatica HOM05D007596 ORTHO05D009672 4.4e-51 205.7 161 60.2
Haze_07490 Corylus avellana HOM05D007596 ORTHO05D009672 8.9e-44 181.4 131 64.9
CBR_g18641 Chara braunii HOM05D007596 ORTHO05D009672 1.7e-42 177.2 144 57.6
AUR62030990 Chenopodium quinoa HOM05D007596 ORTHO05D009672 6.9e-36 155.2 106 69.8
FAN04G0664 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.3e-31 141.0 110 59.1
COL.COLO4_33480 Corchorus olitorius HOM05D007596 ORTHO05D009672 2.3e-31 140.2 106 60.4
FvH4_5g16630 Fragaria vesca HOM05D007596 ORTHO05D009672 4.3e-30 136.0 315 30.2
FAN18G2080 Fragaria x ananassa HOM05D007596 ORTHO05D009672 1.3e-29 134.4 315 30.2
Cpa.g.c40406 Carica papaya HOM05D007596 ORTHO05D009672 2.3e-23 113.6 97 56.7
SGA_v2.0_scaffold90G27974 Striga asiatica HOM05D001155 ORTHO05D001080 1.1e-20 104.8 92 56.5
Sc11g0005570 Simmondsia chinensis HOM05D007596 ORTHO05D009672 1.2e-19 101.3 61 67.2
Sc11g0005890 Simmondsia chinensis HOM05D007596 ORTHO05D009672 3.8e-18 96.3 59 66.1
SGA_v2.0_scaffold90G27967 Striga asiatica HOM05D007596 ORTHO05D009672 1.4e-17 94.4 75 60.0
EL10Ac4g09605 Beta vulgaris HOM05D004918 ORTHO05D005706 7.4e-14 82.0 113 40.7


User provided reference genes

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