Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015684 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.3e-68 263.5 187 100.0
CSS0043643 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 1.6e-63 246.5 183 91.8
CSS0034401 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.4e-27 125.2 165 60.6
CSS0039341 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 5.4e-27 125.2 165 60.0
GSVIVG01009081001 Vitis vinifera HOM05D008046 ORTHO05D004477 3.3e-16 89.4 152 58.6
Cc10_g06700 Coffea canephora HOM05D008046 ORTHO05D004477 1.2e-15 87.4 150 52.7
TAR625G0942 Trochodendron aralioides HOM05D008046 ORTHO05D004477 1.4e-14 84.0 141 40.4
TAR628G0226 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.3e-14 83.2 137 53.3
CSS0046665 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 6.8e-14 81.6 139 49.6
Manes.02G149300 Manihot esculenta HOM05D008046 ORTHO05D004477 6.8e-14 81.6 153 58.2
QL02p002440 Quercus lobata HOM05D008046 ORTHO05D004477 6.8e-14 81.6 154 50.6
CSS0041686 Camellia sinensis var. sinensis HOM05D008046 ORTHO05D004477 2.0e-13 80.1 139 48.9
TAR381G0533 Trochodendron aralioides HOM05D008046 ORTHO05D004477 2.6e-13 79.7 146 52.7
Haze_18268 Corylus avellana HOM05D008046 ORTHO05D004477 1.4e-11 73.9 154 51.9
Haze_18269 Corylus avellana HOM05D008046 ORTHO05D004477 1.4e-11 73.9 154 51.9
CiPaw.16G033000 Carya illinoinensis HOM05D008046 ORTHO05D004477 2.4e-11 73.2 151 60.3
Potri.002G100500 Populus trichocarpa HOM05D008046 ORTHO05D004477 2.4e-11 73.2 148 45.3
Nn5g30002 Nelumbo nucifera HOM05D008176 ORTHO05D004477 3.2e-11 72.8 139 38.1
Potri.005G161700 Populus trichocarpa HOM05D008046 ORTHO05D004477 7.1e-11 71.6 144 53.5
Nn1g05455 Nelumbo nucifera HOM05D008046 ORTHO05D004477 9.2e-11 71.2 141 57.4
Thecc.08G102400 Theobroma cacao HOM05D008046 ORTHO05D004477 2.1e-10 70.1 155 51.0
CiPaw.15G046100 Carya illinoinensis HOM05D008046 ORTHO05D004477 7.8e-10 68.2 163 57.1
DCAR_019289 Daucus carota HOM05D008046 ORTHO05D004477 1.0e-09 67.8 153 54.9
Prupe.1G522800 Prunus persica HOM05D018381 ORTHO05D004477 1.0e-09 67.8 150 49.3
Oeu048965.1 Olea europaea HOM05D008046 ORTHO05D004477 1.7e-09 67.0 147 45.6
TWI12G0518 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 1.7e-09 67.0 155 41.3
Sabra02G0078700 Salix brachista HOM05D008046 ORTHO05D004477 3.0e-09 66.2 146 50.0
Hma1.2p1_1148F.1_g261600 Hydrangea macrophylla HOM05D008046 ORTHO05D004477 6.6e-09 65.1 161 42.9
Lsat_1_v5_gn_6_104300 Lactuca sativa HOM05D008046 ORTHO05D004477 2.5e-08 63.2 131 51.9
Ciclev10002675m.g Citrus clementina HOM05D008046 ORTHO05D004477 7.3e-08 61.6 156 49.4
Sopen11g005030 Solanum pennellii HOM05D008176 ORTHO05D004477 1.2e-07 60.8 137 33.6
Solyc11g010250.1 Solanum lycopersicum HOM05D008176 ORTHO05D004477 1.6e-07 60.5 138 33.3
unitig_32.g11784 Utricularia gibba HOM05D008046 ORTHO05D004477 2.8e-07 59.7 133 43.6
PGSC0003DMG400016149 Solanum tuberosum HOM05D008176 ORTHO05D004477 4.7e-07 58.9 138 34.1
Duzib041G0197 Durio zibethinus HOM05D008046 ORTHO05D004477 6.2e-07 58.5 171 47.4
Duzib116G0877 Durio zibethinus HOM05D008046 ORTHO05D004477 8.1e-07 58.2 169 40.8
TWI36G0888 Tripterygium wilfordii HOM05D008046 ORTHO05D004477 2.4e-06 56.6 152 47.4
Peaxi162Scf00237g00201 Petunia axillaris HOM05D008176 ORTHO05D004477 4.0e-06 55.8 138 33.3
Atru.chr3.1344 Acer truncatum HOM05D008176 ORTHO05D004477 8.9e-06 54.7 138 34.1


User provided reference genes

Program Settings