Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015635 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 1.4e-114 416.4 224 100.0
CSS0045800 Camellia sinensis var. sinensis HOM05D007451 ORTHO05D009399 4.9e-67 258.5 184 80.4
Actinidia07699 Actinidia chinensis HOM05D007451 ORTHO05D009399 5.1e-48 195.3 217 56.7
Rhsim02G0158600 Rhododendron simsii HOM05D007451 ORTHO05D009399 4.3e-47 192.2 239 51.0
GSVIVG01021497001 Vitis vinifera HOM05D007451 ORTHO05D009399 5.8e-44 181.8 218 52.8
Lj1C1189G10 Lonicera japonica HOM05D007451 ORTHO05D009399 8.4e-43 177.9 213 51.6
TAR624G0819 Trochodendron aralioides HOM05D007451 ORTHO05D009399 6.0e-41 171.8 218 50.0
Manes.17G070400 Manihot esculenta HOM05D007451 ORTHO05D009399 6.6e-40 168.3 225 47.1
Potri.004G132600 Populus trichocarpa HOM05D007451 ORTHO05D009399 1.1e-39 167.5 218 48.6
Oeu031273.1 Olea europaea HOM05D007451 ORTHO05D009399 4.3e-39 165.6 218 50.9
CiPaw.10G091600 Carya illinoinensis HOM05D007451 ORTHO05D009399 5.3e-37 158.7 213 48.4
HanXRQChr04g0114281 Helianthus annuus HOM05D007451 ORTHO05D009399 2.6e-36 156.4 217 45.6
Lsat_1_v5_gn_7_28421 Lactuca sativa HOM05D007451 ORTHO05D009399 4.5e-36 155.6 217 46.5
Atru.chr10.1223 Acer truncatum HOM05D005618 ORTHO05D007278 1.7e-35 153.7 208 48.1
Thecc.06G150100 Theobroma cacao HOM05D007451 ORTHO05D009399 1.7e-35 153.7 213 47.4
Nitab4.5_0003044g0100 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.2e-35 153.3 213 46.0
ECA246G3905 Erigeron canadensis HOM05D007451 ORTHO05D009399 8.4e-35 151.4 218 45.4
RcHm_v2.0_Chr5g0014241 Rosa chinensis HOM05D007451 ORTHO05D009399 2.4e-34 149.8 213 45.1
arahy.Tifrunner.gnm1.ann1.Z8IVUX Arachis hypogaea HOM05D007451 ORTHO05D009399 4.2e-34 149.1 218 44.5
MBI07_g23439_MAGBIO Magnolia biondii HOM05D007451 ORTHO05D009399 7.1e-34 148.3 218 47.2
MD05G1283500 Malus domestica HOM05D007451 ORTHO05D009399 1.0e-32 144.4 207 48.3
vmacro10960 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 1.0e-32 144.4 138 58.7
Cfa000938 Carpinus fangiana HOM05D007451 ORTHO05D009399 2.3e-32 143.3 208 46.2
Hma1.2p1_0286F.1_g114180 Hydrangea macrophylla HOM05D007451 ORTHO05D009399 2.3e-32 143.3 220 46.4
Ciclev10018276m.g Citrus clementina HOM05D007451 ORTHO05D009399 5.1e-32 142.1 212 44.3
arahy.Tifrunner.gnm1.ann1.ZU2BT9 Arachis hypogaea HOM05D007451 ORTHO05D009399 8.7e-32 141.4 218 43.6
CANSAT35G1195 Cannabis sativa HOM05D007451 ORTHO05D009399 1.5e-31 140.6 208 43.8
TWI73G0492 Tripterygium wilfordii HOM05D007451 ORTHO05D009399 1.9e-31 140.2 212 43.9
Prupe.4G081100 Prunus persica HOM05D007451 ORTHO05D009399 3.3e-31 139.4 212 45.3
VMungo0251G0908 Vigna mungo HOM05D007451 ORTHO05D009399 4.3e-31 139.0 217 43.8
Medtr4g084470 Medicago truncatula HOM05D007451 ORTHO05D009399 1.3e-30 137.5 212 42.9
FAN21G0862 Fragaria x ananassa HOM05D007451 ORTHO05D009399 3.7e-30 136.0 232 42.7
Sc17g0004890 Simmondsia chinensis HOM05D007451 ORTHO05D009399 3.7e-30 136.0 211 43.1
Psat7g130000 Pisum sativum HOM05D007451 ORTHO05D009399 1.4e-29 134.0 212 43.4
QL05p057933 Quercus lobata HOM05D007451 ORTHO05D009399 2.4e-29 133.3 212 44.3
PSO675G9053 Papaver somniferum HOM05D007451 ORTHO05D009399 4.0e-29 132.5 216 42.6
Phvul.002G096800 Phaseolus vulgaris HOM05D007451 ORTHO05D009399 4.0e-29 132.5 217 42.4
PSO541G4911 Papaver somniferum HOM05D007451 ORTHO05D009399 5.3e-29 132.1 218 42.2
Gohir.D10G042000 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.5e-28 130.6 216 42.1
Gorai.011G044600 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.5e-28 130.6 216 42.1
CAN.G65.121 Capsicum annuum HOM05D007451 ORTHO05D009399 1.0e-27 127.9 218 40.4
Nn4g26566 Nelumbo nucifera HOM05D007451 ORTHO05D009399 2.2e-27 126.7 218 40.8
Nitab4.5_0003838g0080 Nicotiana tabacum HOM05D007451 ORTHO05D009399 2.2e-27 126.7 213 40.8
Lj4g0011610 Lotus japonicus HOM05D007451 ORTHO05D009399 2.9e-27 126.3 183 43.2
Glyma.07G220100 Glycine max HOM05D007451 ORTHO05D009399 6.0e-25 118.6 217 39.2
Aqoxy1G01697 Aquilegia oxysepala HOM05D007451 ORTHO05D009399 2.3e-24 116.7 213 39.9
Gohir.A10G041200 Gossypium hirsutum HOM05D007451 ORTHO05D009399 5.1e-24 115.5 199 41.2
FAN11G0575 Fragaria x ananassa HOM05D007451 ORTHO05D009399 1.9e-23 113.6 211 40.3
Lalb_Chr16g0385141 Lupinus albus HOM05D007451 ORTHO05D009399 4.3e-23 112.5 218 38.5
EL10Ac8g19670 Beta vulgaris HOM05D007451 ORTHO05D009399 7.4e-23 111.7 211 38.9
Dinv32247 Davidia involucrata HOM05D007451 ORTHO05D009399 7.4e-23 111.7 130 54.6
Sabra04G0085400 Salix brachista HOM05D007451 ORTHO05D009399 7.4e-23 111.7 210 40.5
EL10Ac8g19669 Beta vulgaris HOM05D007451 ORTHO05D009399 3.7e-22 109.4 211 38.4
Haze_05609 Corylus avellana HOM05D007451 ORTHO05D009399 6.3e-22 108.6 131 49.6
Thhalv10017344m.g Eutrema salsugineum HOM05D007451 ORTHO05D009399 2.0e-20 103.6 170 40.6
Peaxi162Scf00443g00210 Petunia axillaris HOM05D007451 ORTHO05D009399 7.6e-20 101.7 138 46.4
AL4G30550 Arabidopsis lyrata HOM05D007451 ORTHO05D009399 1.0e-19 101.3 131 44.3
AT2G34580 Arabidopsis thaliana HOM05D007451 ORTHO05D009399 1.0e-19 101.3 131 44.3
FvH4_3g05500 Fragaria vesca HOM05D007451 ORTHO05D009399 1.0e-19 101.3 213 36.6
Sp4g16840 Schrenkiella parvula HOM05D007451 ORTHO05D009399 1.3e-19 100.9 169 40.2
Cc10_g10170 Coffea canephora HOM05D007451 ORTHO05D009399 5.0e-19 99.0 133 46.6
Eucgr.E03355 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.5e-19 98.6 138 42.8
BcaB02g09525 Brassica carinata HOM05D007451 ORTHO05D009399 8.5e-19 98.2 131 45.8
BcaC02g11529 Brassica carinata HOM05D007451 ORTHO05D009399 1.1e-18 97.8 131 46.6
Gorai.008G053800 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.1e-18 97.8 216 36.1
TPR.G38261 Trifolium pratense HOM05D007451 ORTHO05D009399 1.4e-18 97.4 131 45.0
Carub.0004s1625 Capsella rubella HOM05D007451 ORTHO05D009399 1.9e-18 97.1 131 44.3
CARHR128670 Cardamine hirsuta HOM05D007451 ORTHO05D009399 9.3e-18 94.7 134 42.5
FAN25G1374 Fragaria x ananassa HOM05D005618 ORTHO05D007278 1.8e-16 90.5 217 33.6
Eucgr.B02066 Eucalyptus grandis HOM05D007451 ORTHO05D009399 6.7e-16 88.6 134 40.3
Glyma.20G018400 Glycine max HOM05D007451 ORTHO05D009399 3.3e-15 86.3 131 42.7
BolC4t23021H Brassica oleracea HOM05D005261 ORTHO05D006180 7.4e-15 85.1 118 44.1
A05p11060 Brassica napus HOM05D005261 ORTHO05D006180 1.3e-14 84.3 155 38.1
BraA05t20052Z Brassica rapa HOM05D007451 ORTHO05D009399 3.7e-14 82.8 188 33.0
THA.LOC104814695 Tarenaya hassleriana HOM05D007451 ORTHO05D009399 3.1e-13 79.7 140 40.0
AUR62002741 Chenopodium quinoa HOM05D007451 ORTHO05D009399 5.3e-13 79.0 211 32.7
AUR62002733 Chenopodium quinoa HOM05D007451 ORTHO05D009399 6.9e-13 78.6 211 32.7
AUR62030193 Chenopodium quinoa HOM05D007451 ORTHO05D009399 2.6e-12 76.6 211 32.7
Gohir.D12G050550 Gossypium hirsutum HOM05D007451 ORTHO05D009399 5.9e-12 75.5 167 35.9
Gorai.004G185100 Gossypium raimondii HOM05D007451 ORTHO05D009399 2.2e-11 73.6 167 36.5
CDE02G3067 Ceratophyllum demersum HOM05D007451 ORTHO05D009399 3.8e-11 72.8 144 38.9
Gohir.D12G174800 Gossypium hirsutum HOM05D007451 ORTHO05D009399 1.9e-10 70.5 130 40.0
Eucgr.I02284 Eucalyptus grandis HOM05D007451 ORTHO05D009399 4.2e-10 69.3 117 40.2
DCAR_003911 Daucus carota HOM05D007451 ORTHO05D009399 2.7e-09 66.6 96 43.8
arahy.Tifrunner.gnm1.ann1.WBAN0Y Arachis hypogaea HOM05D007451 ORTHO05D009399 1.4e-08 64.3 119 39.5
Gorai.010G163100 Gossypium raimondii HOM05D007451 ORTHO05D009399 1.8e-08 63.9 50 62.0
C04p14410 Brassica napus HOM05D007451 ORTHO05D009399 3.0e-08 63.2 103 40.8
vmacro10959 Vaccinium macrocarpon HOM05D007451 ORTHO05D009399 6.7e-08 62.0 90 47.8
Zm00001eb204550 Zea mays HOM05D007451 ORTHO05D009399 1.5e-07 60.8 205 30.2
Eucgr.J01485 Eucalyptus grandis HOM05D007451 ORTHO05D009399 7.4e-07 58.5 99 35.4
BolC4t27857H Brassica oleracea HOM05D007451 ORTHO05D009399 9.7e-07 58.2 85 45.9


User provided reference genes

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