Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015629 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 4.5e-211 737.6 369 100.0
Actinidia17791 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.9e-181 638.6 366 83.1
Dinv25868 Davidia involucrata HOM05D007327 ORTHO05D009342 3.7e-173 611.7 360 83.1
Hma1.2p1_0105F.1_g050650 Hydrangea macrophylla HOM05D007327 ORTHO05D009342 1.9e-164 582.8 353 78.2
Prupe.8G031100 Prunus persica HOM05D007327 ORTHO05D009342 1.2e-163 580.1 366 76.0
GSVIVG01034535001 Vitis vinifera HOM05D007327 ORTHO05D009342 2.7e-163 578.9 357 80.1
Manes.18G092400 Manihot esculenta HOM05D007327 ORTHO05D009342 3.0e-162 575.5 353 77.1
Cfa018321 Carpinus fangiana HOM05D007327 ORTHO05D009342 1.9e-161 572.8 360 75.0
Ciclev10001558m.g Citrus clementina HOM05D007327 ORTHO05D009342 1.9e-161 572.8 367 77.7
Thecc.08G153100 Theobroma cacao HOM05D007327 ORTHO05D009342 8.1e-160 567.4 355 76.9
COL.COLO4_08563 Corchorus olitorius HOM05D007327 ORTHO05D009342 1.4e-159 566.6 349 78.2
TAR628G0726 Trochodendron aralioides HOM05D007327 ORTHO05D009342 6.9e-159 564.3 359 76.6
Gorai.002G114900 Gossypium raimondii HOM05D007327 ORTHO05D009342 1.9e-156 556.2 350 76.9
TWI60G1090 Tripterygium wilfordii HOM05D007327 ORTHO05D009342 1.9e-156 556.2 357 72.5
Gohir.D01G089200 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.2e-156 555.4 350 76.9
Atru.chr13.2102 Acer truncatum HOM05D007327 ORTHO05D009342 9.3e-156 553.9 355 76.1
Nn5g28751 Nelumbo nucifera HOM05D007327 ORTHO05D009342 2.1e-155 552.7 357 72.8
Gohir.A01G103900 Gossypium hirsutum HOM05D007327 ORTHO05D009342 3.5e-155 552.0 350 76.3
HanXRQChr04g0108941 Helianthus annuus HOM05D007327 ORTHO05D009342 6.0e-155 551.2 351 72.9
Peaxi162Scf00599g00511 Petunia axillaris HOM05D007327 ORTHO05D009342 1.3e-154 550.1 361 71.7
Oeu051268.1 Olea europaea HOM05D007327 ORTHO05D009342 3.0e-154 548.9 388 69.3
ECA247G1449 Erigeron canadensis HOM05D007327 ORTHO05D009342 5.1e-154 548.1 362 70.4
FvH4_2g13700 Fragaria vesca HOM05D007327 ORTHO05D009342 2.5e-153 545.8 351 73.5
MD05G1026600 Malus domestica HOM05D007327 ORTHO05D009342 3.3e-153 545.4 360 72.5
Potri.002G067900 Populus trichocarpa HOM05D007327 ORTHO05D009342 6.2e-152 541.2 351 75.8
Eucgr.F04237 Eucalyptus grandis HOM05D007327 ORTHO05D009342 2.4e-151 539.3 353 71.4
arahy.Tifrunner.gnm1.ann1.S2I56E Arachis hypogaea HOM05D007327 ORTHO05D009342 3.1e-151 538.9 353 74.2
arahy.Tifrunner.gnm1.ann1.LUB646 Arachis hypogaea HOM05D007327 ORTHO05D009342 5.3e-151 538.1 353 74.2
CiPaw.15G016000 Carya illinoinensis HOM05D007327 ORTHO05D009342 5.3e-151 538.1 330 76.7
RcHm_v2.0_Chr6g0275381 Rosa chinensis HOM05D007327 ORTHO05D009342 5.3e-151 538.1 354 72.0
CANSAT25G1895 Cannabis sativa HOM05D007327 ORTHO05D009342 3.4e-150 535.4 358 70.7
Lsat_1_v5_gn_1_6021 Lactuca sativa HOM05D007327 ORTHO05D009342 3.4e-150 535.4 350 70.6
Sopen04g027430 Solanum pennellii HOM05D007327 ORTHO05D009342 4.9e-149 531.6 362 69.6
Solyc04g071470.3 Solanum lycopersicum HOM05D007327 ORTHO05D009342 6.4e-149 531.2 357 70.3
Sed0007638 Sechium edule HOM05D007327 ORTHO05D009342 2.4e-148 529.3 365 67.9
Glyma.02G081500 Glycine max HOM05D007327 ORTHO05D009342 9.3e-148 527.3 352 70.5
MELO3C029831.2 Cucumis melo HOM05D007327 ORTHO05D009342 1.3e-146 523.5 365 66.8
Lalb_Chr19g0130241 Lupinus albus HOM05D007327 ORTHO05D009342 2.3e-146 522.7 358 71.2
Psat1g101680 Pisum sativum HOM05D007327 ORTHO05D009342 3.0e-146 522.3 352 68.2
CsaV3_6G005130 Cucumis sativus L. HOM05D007327 ORTHO05D009342 1.1e-145 520.4 365 66.6
QL02p039069 Quercus lobata HOM05D007327 ORTHO05D009342 1.9e-145 519.6 457 59.1
FAN24G0347 Fragaria x ananassa HOM05D007327 ORTHO05D009342 7.4e-145 517.7 415 62.2
Phvul.004G094900 Phaseolus vulgaris HOM05D007327 ORTHO05D009342 7.4e-145 517.7 354 70.9
FAN15G0044 Fragaria x ananassa HOM05D007327 ORTHO05D009342 1.3e-144 516.9 415 61.9
Lj2g0012645 Lotus japonicus HOM05D007327 ORTHO05D009342 4.0e-143 511.9 355 71.0
Nitab4.5_0002452g0030 Nicotiana tabacum HOM05D007327 ORTHO05D009342 3.4e-142 508.8 364 67.6
TPR.G31184 Trifolium pratense HOM05D007327 ORTHO05D009342 5.8e-142 508.1 351 68.4
SGA_v2.0_scaffold24G10336 Striga asiatica HOM05D007327 ORTHO05D009342 7.9e-139 497.7 352 68.5
Medtr6g036750 Medicago truncatula HOM05D007327 ORTHO05D009342 6.7e-138 494.6 352 65.6
PSO541G6301 Papaver somniferum HOM05D007327 ORTHO05D009342 1.1e-137 493.8 360 66.9
ATR0582G033 Amborella trichopoda HOM05D007327 ORTHO05D009342 1.3e-136 490.3 352 65.6
Duzib093G0512 Durio zibethinus HOM05D007327 ORTHO05D009342 2.8e-136 489.2 355 69.6
Os01g0867200 Oryza sativa ssp. japonica HOM05D007327 ORTHO05D009342 5.3e-135 485.0 355 63.9
PGR044G2476 Punica granatum HOM05D007327 ORTHO05D009342 9.0e-135 484.2 354 69.2
PGR100G0004 Punica granatum HOM05D007327 ORTHO05D009342 9.0e-135 484.2 354 69.2
PGR080G0004 Punica granatum HOM05D007327 ORTHO05D009342 4.5e-134 481.9 354 68.9
Aqoxy6G00379 Aquilegia oxysepala HOM05D007327 ORTHO05D009342 5.5e-132 474.9 319 70.2
HPP92_000065 Vanilla planifolia HOM05D007327 ORTHO05D009342 7.1e-132 474.6 357 64.4
Zm00001eb146700 Zea mays HOM05D007327 ORTHO05D009342 9.3e-132 474.2 352 64.8
Haze_17755 Corylus avellana HOM05D007327 ORTHO05D009342 2.9e-125 452.6 504 49.8
PSO675G1203 Papaver somniferum HOM05D007327 ORTHO05D009342 1.6e-123 446.8 362 62.2
Hund26695 Selenicereus undatus HOM05D007327 ORTHO05D009342 4.3e-121 438.7 356 63.2
ClCG08G007070 Citrullus lanatus HOM05D007327 ORTHO05D009342 3.7e-120 435.6 470 50.2
Cc10_g14850 Coffea canephora HOM05D007327 ORTHO05D009342 4.1e-111 405.6 286 68.9
unitig_26.g9897 Utricularia gibba HOM05D007327 ORTHO05D009342 2.3e-90 336.7 290 58.3
Glyma.16G166900 Glycine max HOM05D007327 ORTHO05D009342 7.5e-89 331.6 192 78.1
Sabra02G0053500 Salix brachista HOM05D007327 ORTHO05D009342 9.1e-87 324.7 238 64.7
Pp3c20_20940 Physcomitrium patens HOM05D007327 ORTHO05D009342 6.8e-82 308.5 357 42.9
SMO335G0004 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 6.3e-80 302.0 358 43.9
SalBow7G2928 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.4e-79 300.1 343 51.3
Ca_25918_v3 Cicer arietinum L. HOM05D007327 ORTHO05D009342 7.8e-78 295.0 197 68.5
VMungo0464G2010 Vigna mungo HOM05D007327 ORTHO05D009342 2.9e-72 276.6 215 60.9
DCAR_010093 Daucus carota HOM05D007327 ORTHO05D009342 8.6e-69 265.0 160 76.2
Migut.C00996 Erythranthe guttata HOM05D007327 ORTHO05D009342 8.9e-66 255.0 152 73.7
AagrBONN_evm.TU.Sc2ySwM_344.2825 Anthoceros agrestis HOM05D007327 ORTHO05D009342 8.9e-58 228.4 237 47.7
Cc00_g31580 Coffea canephora HOM05D007327 ORTHO05D009342 3.4e-57 226.5 140 75.0
SHI09061 Sapria himalayana HOM05D007327 ORTHO05D009342 1.1e-55 221.5 249 50.6
Cpa.g.sc21.198 Carica papaya HOM05D007327 ORTHO05D009342 3.5e-54 216.5 160 70.6
SMO228G0199 Selaginella moellendorffii HOM05D007327 ORTHO05D009342 2.0e-49 200.7 356 34.0
Cpa.g.c33136.2 Carica papaya HOM05D007327 ORTHO05D009342 1.4e-39 167.9 116 70.7
MCO03G524 Micromonas commoda HOM05D007327 ORTHO05D009342 9.6e-36 155.2 432 26.6
Glyma.16G166950 Glycine max HOM05D007327 ORTHO05D009342 3.6e-35 153.3 128 58.6
PRCOL_00001255 Prasinoderma coloniale HOM05D007327 ORTHO05D009342 3.1e-34 150.2 380 29.7
CSS0013095 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 2.9e-32 143.7 69 98.6
SalBow7G1135 Salvia bowleyana HOM05D007327 ORTHO05D009342 2.9e-32 143.7 103 69.9
CSS0009897 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.8e-32 143.3 69 97.1
CSS0040121 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.1e-31 141.7 69 97.1
CSS0048751 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 3.2e-31 140.2 69 97.1
MBI17_g33117_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.1e-31 139.0 76 77.6
MBI17_g25900_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 7.9e-30 135.6 102 66.7
Cc07_g11820 Coffea canephora HOM05D007327 ORTHO05D009342 3.9e-29 133.3 75 73.3
Cc10_g14400 Coffea canephora HOM05D007327 ORTHO05D009342 3.9e-29 133.3 75 73.3
CDE02G1931 Ceratophyllum demersum HOM05D007327 ORTHO05D009342 1.3e-27 128.3 71 77.5
MBI17_g33124_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 1.4e-26 124.8 113 59.3
SEGI_20996 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 3.1e-26 123.6 108 57.4
SEGI_01400 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.9e-26 122.5 109 51.4
CSS0014849 Camellia sinensis var. sinensis HOM05D007327 ORTHO05D009342 1.3e-24 118.2 90 71.1
PSO541G3507 Papaver somniferum HOM05D000022 ORTHO05D000071 8.2e-19 99.0 55 76.4
MBI09_g12042_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 5.3e-18 96.3 55 70.9
HPP92_000064 Vanilla planifolia HOM05D007327 ORTHO05D009342 6.9e-18 95.9 73 64.4
Cre12.g548350 Chlamydomonas reinhardtii HOM05D007327 ORTHO05D009342 3.4e-17 93.6 293 26.3
Actinidia27255 Actinidia chinensis HOM05D007327 ORTHO05D009342 2.2e-16 90.9 160 41.9
SEGI_01531 Sequoiadendron giganteum HOM05D007327 ORTHO05D009342 6.1e-14 82.8 56 57.1
MBI17_g33120_MAGBIO Magnolia biondii HOM05D007327 ORTHO05D009342 6.7e-13 79.3 106 36.8
arahy.Tifrunner.gnm1.ann1.KIIE1S Arachis hypogaea HOM05D000198 ORTHO05D003365 4.1e-10 70.1 58 55.2
arahy.Tifrunner.gnm1.ann1.B7BSQF Arachis hypogaea HOM05D000002 ORTHO05D000047 1.2e-09 68.6 93 44.1
arahy.Tifrunner.gnm1.ann1.DQ97IN Arachis hypogaea HOM05D007327 ORTHO05D009342 1.3e-08 65.1 91 52.7


User provided reference genes

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