Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015628 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.3e-66 253.8 136 100.0
CSS0048436 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 7.8e-60 233.8 134 93.3
CSS0008104 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.5e-58 229.6 134 90.3
CSS0046654 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 3.3e-58 228.4 134 91.8
CSS0025185 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 4.3e-58 228.0 134 91.8
CSS0030227 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 5.6e-58 227.6 134 91.0
CSS0008280 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.2e-57 226.5 134 91.0
CSS0004656 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-53 213.0 130 88.5
CSS0039010 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.4e-53 213.0 133 86.5
CSS0022599 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 1.9e-53 212.6 134 87.3
GSVIVG01010138001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.2e-13 79.0 95 51.6
Cpa.g.sc53.120 Carica papaya HOM05D008138 ORTHO05D010043 9.4e-13 77.4 98 40.8
Sed0002378 Sechium edule HOM05D008138 ORTHO05D010043 9.4e-13 77.4 107 43.9
Thecc.02G319500 Theobroma cacao HOM05D008138 ORTHO05D010043 3.6e-12 75.5 102 41.2
RhsimUnG0060000 Rhododendron simsii HOM05D009462 ORTHO05D013623 4.7e-12 75.1 74 52.7
ClCG05G023400 Citrullus lanatus HOM05D008138 ORTHO05D010043 7.9e-12 74.3 105 43.8
RhsimUnG0062800 Rhododendron simsii HOM05D009462 ORTHO05D013623 7.9e-12 74.3 77 49.4
GSVIVG01010131001 Vitis vinifera HOM05D008138 ORTHO05D010043 3.9e-11 72.0 104 43.3
Lj2g0015438 Lotus japonicus HOM05D008138 ORTHO05D010043 6.7e-11 71.2 94 44.7
RhsimUnG0090300 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.1e-10 70.5 128 35.9
RhsimUnG0090100 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.6e-10 69.3 80 45.0
TAR629G0219 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.7e-10 68.2 92 41.3
RhsimUnG0201100 Rhododendron simsii HOM05D009462 ORTHO05D013623 7.4e-10 67.8 81 44.4
Glyma.01G069000 Glycine max HOM05D008138 ORTHO05D010043 9.7e-10 67.4 93 40.9
Potri.013G126000 Populus trichocarpa HOM05D008138 ORTHO05D010043 2.2e-09 66.2 98 44.9
ClCG01G007380 Citrullus lanatus HOM05D022360 ORTHO05D010043 3.7e-09 65.5 116 41.4
Nn4g23585 Nelumbo nucifera HOM05D008138 ORTHO05D010043 4.8e-09 65.1 97 38.1
Sed0011337 Sechium edule HOM05D022360 ORTHO05D010043 4.8e-09 65.1 110 40.9
CsaV3_5G018850 Cucumis sativus L. HOM05D022360 ORTHO05D034989 8.2e-09 64.3 94 43.6
Glyma.02G125900 Glycine max HOM05D008138 ORTHO05D010043 8.2e-09 64.3 93 38.7
QL10p055344 Quercus lobata HOM05D008138 ORTHO05D010043 1.1e-08 63.9 98 35.7
RhsimUnG0204000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.1e-08 63.9 75 48.0
Nn3g17583 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.4e-08 63.5 97 36.1
Cpa.g.sc9.360 Carica papaya HOM05D008138 ORTHO05D010043 2.4e-08 62.8 97 36.1
Eucgr.G01572 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.4e-08 62.8 102 38.2
RhsimUnG0175000 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.4e-08 62.8 95 40.0
Eucgr.G02403 Eucalyptus grandis HOM05D008138 ORTHO05D010043 3.1e-08 62.4 102 38.2
Manes.04G036300 Manihot esculenta HOM05D008138 ORTHO05D010043 3.1e-08 62.4 94 38.3
TPR.G2576 Trifolium pratense HOM05D008138 ORTHO05D010043 5.3e-08 61.6 99 39.4
Dinv01548 Davidia involucrata HOM05D008138 ORTHO05D010043 7.0e-08 61.2 107 37.4
Ciclev10022615m.g Citrus clementina HOM05D017113 ORTHO05D019028 1.2e-07 60.5 117 35.9
RhsimUnG0201400 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.0e-07 59.7 118 38.1
RhsimUnG0203600 Rhododendron simsii HOM05D009462 ORTHO05D013623 2.0e-07 59.7 111 40.5
Eucgr.G01398 Eucalyptus grandis HOM05D008138 ORTHO05D010043 2.6e-07 59.3 98 36.7
Manes.04G036500 Manihot esculenta HOM05D008138 ORTHO05D010043 2.6e-07 59.3 85 40.0
Ciclev10022611m.g Citrus clementina HOM05D017113 ORTHO05D019028 3.4e-07 58.9 117 35.9
RhsimUnG0012100 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.4e-07 58.9 127 33.1
RhsimUnG0108600 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.4e-07 58.9 127 33.1
RhsimUnG0216100 Rhododendron simsii HOM05D009462 ORTHO05D013623 3.4e-07 58.9 124 35.5
RhsimUnG0222200 Rhododendron simsii HOM05D009462 ORTHO05D013623 5.9e-07 58.2 116 37.1
TAR629G0644 Trochodendron aralioides HOM05D008138 ORTHO05D010043 5.9e-07 58.2 97 37.1
QL10p055339 Quercus lobata HOM05D008138 ORTHO05D010043 7.7e-07 57.8 98 33.7
RhsimUnG0060400 Rhododendron simsii HOM05D009462 ORTHO05D013623 7.7e-07 57.8 119 37.0
RhsimUnG0216000 Rhododendron simsii HOM05D009462 ORTHO05D013623 1.3e-06 57.0 72 48.6
Nn1g02864 Nelumbo nucifera HOM05D008138 ORTHO05D010043 1.7e-06 56.6 99 37.4
Rhsim09G0118100 Rhododendron simsii HOM05D008138 ORTHO05D010043 5.0e-06 55.1 103 37.9
Dinv16583 Davidia involucrata HOM05D008138 ORTHO05D010043 6.5e-06 54.7 78 42.3
Atru.chr4.1346 Acer truncatum HOM05D058995 ORTHO05D010043 8.5e-06 54.3 102 35.3
CSS0022846 Camellia sinensis var. sinensis HOM05D008138 ORTHO05D010043 8.5e-06 54.3 97 36.1
CsaV3_5G033610 Cucumis sativus L. HOM05D008138 ORTHO05D010043 8.5e-06 54.3 71 45.1


User provided reference genes

Program Settings