Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015626 Camellia sinensis var. sinensis HOM05D007341 ORTHO05D009075 3.4e-89 331.6 167 100.0
CiPaw.01G092200 Carya illinoinensis HOM05D007341 ORTHO05D009075 3.2e-47 192.2 142 71.1
Dinv20313 Davidia involucrata HOM05D007341 ORTHO05D009075 1.6e-46 189.9 166 66.9
QL05p085130 Quercus lobata HOM05D007341 ORTHO05D009075 7.9e-46 187.6 112 79.5
Haze_16246 Corylus avellana HOM05D007341 ORTHO05D009075 1.8e-45 186.4 166 63.3
GSVIVG01029444001 Vitis vinifera HOM05D007341 ORTHO05D009075 3.0e-45 185.7 100 89.0
Cfa002160 Carpinus fangiana HOM05D007341 ORTHO05D009075 6.7e-45 184.5 134 73.1
Cc06_g16890 Coffea canephora HOM05D007341 ORTHO05D009075 5.7e-44 181.4 160 62.5
MELO3C019561.2 Cucumis melo HOM05D007341 ORTHO05D009075 5.7e-44 181.4 102 83.3
Prupe.3G028000 Prunus persica HOM05D007341 ORTHO05D009075 7.4e-44 181.0 145 66.9
Hma1.2p1_0422F.1_g150100 Hydrangea macrophylla HOM05D007341 ORTHO05D009075 9.7e-44 180.6 126 75.4
TWI12G0959 Tripterygium wilfordii HOM05D007341 ORTHO05D009075 9.7e-44 180.6 124 73.4
Sabra07G0002700 Salix brachista HOM05D007341 ORTHO05D009075 1.6e-43 179.9 160 64.4
MD09G1169800 Malus domestica HOM05D007341 ORTHO05D009075 3.7e-43 178.7 104 81.7
Sed0003722 Sechium edule HOM05D007341 ORTHO05D009075 3.7e-43 178.7 99 83.8
Ciclev10029418m.g Citrus clementina HOM05D007341 ORTHO05D009075 4.8e-43 178.3 97 86.6
HanXRQChr03g0072101 Helianthus annuus HOM05D007341 ORTHO05D009075 4.8e-43 178.3 99 86.9
CsaV3_3G018050 Cucumis sativus L. HOM05D007341 ORTHO05D009075 8.2e-43 177.6 95 87.4
FAN02G2832 Fragaria x ananassa HOM05D007341 ORTHO05D009075 1.4e-42 176.8 141 64.5
Lsat_1_v5_gn_9_114620 Lactuca sativa HOM05D007341 ORTHO05D009075 1.4e-42 176.8 99 85.9
RcHm_v2.0_Chr2g0148351 Rosa chinensis HOM05D007341 ORTHO05D009075 1.4e-42 176.8 104 79.8
Duzib235G0177 Durio zibethinus HOM05D007341 ORTHO05D009075 2.4e-42 176.0 141 66.7
ECA240G2002 Erigeron canadensis HOM05D007341 ORTHO05D009075 3.1e-42 175.6 99 84.8
Sopen10g035850 Solanum pennellii HOM05D007341 ORTHO05D009075 3.1e-42 175.6 133 67.7
Eucgr.F04060 Eucalyptus grandis HOM05D007341 ORTHO05D009075 4.1e-42 175.3 151 60.3
PGSC0003DMG400019203 Solanum tuberosum HOM05D007341 ORTHO05D009075 6.9e-42 174.5 133 67.7
FvH4_6g36350 Fragaria vesca HOM05D007341 ORTHO05D009075 9.0e-42 174.1 141 63.8
Solyc10g086470.2 Solanum lycopersicum HOM05D007341 ORTHO05D009075 9.0e-42 174.1 133 66.9
Gohir.D05G117600 Gossypium hirsutum HOM05D007341 ORTHO05D009075 1.2e-41 173.7 99 81.8
TAR636G1203 Trochodendron aralioides HOM05D007341 ORTHO05D009075 2.0e-41 172.9 103 80.6
FAN09G2851 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.4e-41 172.2 129 69.0
Nitab4.5_0000349g0220 Nicotiana tabacum HOM05D007341 ORTHO05D009075 3.4e-41 172.2 129 65.9
Potri.007G003600 Populus trichocarpa HOM05D007341 ORTHO05D009075 3.4e-41 172.2 156 62.8
Thecc.06G049400 Theobroma cacao HOM05D007341 ORTHO05D009075 4.5e-41 171.8 126 69.8
CANSAT01G1666 Cannabis sativa HOM05D007341 ORTHO05D009075 1.7e-40 169.9 97 81.4
THA.LOC104808109 Tarenaya hassleriana HOM05D007341 ORTHO05D009075 2.2e-40 169.5 143 62.2
Gohir.A05G116700 Gossypium hirsutum HOM05D007341 ORTHO05D009075 5.0e-40 168.3 162 56.8
DCAR_027600 Daucus carota HOM05D007341 ORTHO05D009075 6.5e-40 167.9 150 60.0
Migut.K00075 Erythranthe guttata HOM05D007341 ORTHO05D009075 6.5e-40 167.9 131 65.6
Gorai.009G121500 Gossypium raimondii HOM05D007341 ORTHO05D009075 6.5e-40 167.9 162 56.8
PGR102G3137 Punica granatum HOM05D007341 ORTHO05D009075 6.5e-40 167.9 140 64.3
MSTRG.26115 Avicennia marina HOM05D007341 ORTHO05D009075 2.5e-39 166.0 137 63.5
Glyma.15G000400 Glycine max HOM05D007341 ORTHO05D009075 4.6e-38 161.8 152 57.9
Phvul.005G082000 Phaseolus vulgaris HOM05D007341 ORTHO05D009075 4.6e-38 161.8 154 57.1
unitig_748.g7237 Utricularia gibba HOM05D007341 ORTHO05D009075 2.3e-37 159.5 124 64.5
Aqoxy7G02561 Aquilegia oxysepala HOM05D007341 ORTHO05D009075 3.9e-37 158.7 138 63.0
Thhalv10019269m.g Eutrema salsugineum HOM05D007341 ORTHO05D009075 6.7e-37 157.9 152 59.2
Actinidia38822 Actinidia chinensis HOM05D007341 ORTHO05D009075 1.1e-36 157.1 145 64.8
BraA07t30379Z Brassica rapa HOM05D007341 ORTHO05D009075 1.9e-36 156.4 167 55.1
Sp5g34040 Schrenkiella parvula HOM05D007341 ORTHO05D009075 1.9e-36 156.4 148 57.4
CARHR072660 Cardamine hirsuta HOM05D007341 ORTHO05D009075 3.3e-36 155.6 152 57.9
Medtr6g004140 Medicago truncatula HOM05D007341 ORTHO05D009075 3.3e-36 155.6 129 64.3
LjContig00482g0010930 Lotus japonicus HOM05D007341 ORTHO05D009075 4.3e-36 155.2 146 59.6
BcaC08g45393 Brassica carinata HOM05D007341 ORTHO05D009075 7.4e-36 154.5 167 53.9
C06p30240 Brassica napus HOM05D007341 ORTHO05D009075 7.4e-36 154.5 167 53.9
BolC6t38187H Brassica oleracea HOM05D007341 ORTHO05D009075 7.4e-36 154.5 167 53.9
A07p27380 Brassica napus HOM05D007341 ORTHO05D009075 9.7e-36 154.1 167 54.5
Lalb_Chr24g0392671 Lupinus albus HOM05D007341 ORTHO05D009075 1.3e-35 153.7 94 79.8
BcaB02g07190 Brassica carinata HOM05D007341 ORTHO05D009075 1.7e-35 153.3 156 55.8
CDE05G1356 Ceratophyllum demersum HOM05D007341 ORTHO05D009075 1.1e-34 150.6 128 60.2
AT1G78995 Arabidopsis thaliana HOM05D007341 ORTHO05D009075 2.4e-34 149.4 163 52.1
Carub.0002s2586 Capsella rubella HOM05D007341 ORTHO05D009075 5.3e-34 148.3 148 56.1
Pp3c15_22740 Physcomitrium patens HOM05D007341 ORTHO05D009075 5.3e-34 148.3 114 64.9
AL2G39450 Arabidopsis lyrata HOM05D007341 ORTHO05D009075 6.9e-34 147.9 99 72.7
HPP92_026441 Vanilla planifolia HOM05D007341 ORTHO05D009075 6.9e-34 147.9 165 52.7
ATR0626G096 Amborella trichopoda HOM05D007341 ORTHO05D009075 1.2e-33 147.1 97 73.2
AUR62025687 Chenopodium quinoa HOM05D007341 ORTHO05D009075 1.5e-33 146.7 98 73.5
AUR62001305 Chenopodium quinoa HOM05D007341 ORTHO05D009075 2.0e-33 146.4 98 72.4
Hund18551 Selenicereus undatus HOM05D007341 ORTHO05D009075 3.4e-33 145.6 97 71.1
Mapoly0061s0126 Marchantia polymorpha HOM05D007341 ORTHO05D009075 1.7e-32 143.3 96 69.8
EL10Ac7g18105 Beta vulgaris HOM05D007341 ORTHO05D009075 5.0e-32 141.7 97 71.1
PSO170G4447 Papaver somniferum HOM05D007341 ORTHO05D009075 5.0e-32 141.7 128 57.0
SGA_v2.0_scaffold94G28462 Striga asiatica HOM05D007341 ORTHO05D009075 1.1e-31 140.6 151 53.0
PSO063G2737 Papaver somniferum HOM05D007341 ORTHO05D009075 1.4e-31 140.2 128 56.2
ClCG05G010440 Citrullus lanatus HOM05D007341 ORTHO05D009075 1.2e-30 137.1 85 77.6
Nn8g41280 Nelumbo nucifera HOM05D007341 ORTHO05D009075 4.7e-30 135.2 127 61.4
SMO232G0085 Selaginella moellendorffii HOM05D007341 ORTHO05D009075 1.8e-29 133.3 129 55.0
Zm00001eb227230 Zea mays HOM05D007341 ORTHO05D009075 1.8e-29 133.3 123 57.7
Nitab4.5_0001911g0010 Nicotiana tabacum HOM05D007341 ORTHO05D009075 3.9e-29 132.1 148 50.0
DCAR_011722 Daucus carota HOM05D007341 ORTHO05D009075 5.1e-29 131.7 152 49.3
vmacro18722 Vaccinium macrocarpon HOM05D007341 ORTHO05D009075 8.8e-29 131.0 152 57.2
Cpa.g.sc4293.1 Carica papaya HOM05D007341 ORTHO05D009075 1.1e-28 130.6 76 80.3
FAN14G2925 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.3e-28 129.0 141 53.2
FAN14G4935 Fragaria x ananassa HOM05D007341 ORTHO05D009075 3.3e-28 129.0 141 53.2
VMungo1080G1509 Vigna mungo HOM05D007341 ORTHO05D009075 9.7e-28 127.5 137 54.0
Sc16g0003760 Simmondsia chinensis HOM05D007341 ORTHO05D009075 1.3e-27 127.1 80 80.0
Rhsim08G0252300 Rhododendron simsii HOM05D000912 ORTHO05D009075 2.2e-27 126.3 118 68.6
Sabra14G0002900 Salix brachista HOM05D007341 ORTHO05D009075 3.1e-26 122.5 90 68.9
Os06g0704200 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 5.9e-25 118.2 94 63.8
Manes.06G177800 Manihot esculenta HOM05D007341 ORTHO05D009075 2.7e-22 109.4 107 57.9
Oeu004021.1 Olea europaea HOM05D007341 ORTHO05D009075 3.6e-22 109.0 122 53.3
C02p36120 Brassica napus HOM05D007341 ORTHO05D009075 4.7e-22 108.6 66 75.8
Peaxi162Scf00330g00029 Petunia axillaris HOM05D007341 ORTHO05D009075 8.8e-21 104.4 143 47.6
Cre01.g000800 Chlamydomonas reinhardtii HOM05D007341 ORTHO05D009075 9.1e-18 94.4 94 47.9
Lj9A544T49 Lonicera japonica HOM05D007341 ORTHO05D009075 3.5e-17 92.4 90 61.1
SalBow1G8719 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.5e-17 92.4 113 46.9
Aa31LG4G1990 Aethionema arabicum HOM05D007341 ORTHO05D009075 4.5e-17 92.0 129 46.5
Psat6g000680 Pisum sativum HOM05D007341 ORTHO05D009075 4.5e-17 92.0 62 75.8
SalBow1G7986 Salvia bowleyana HOM05D007341 ORTHO05D009075 3.8e-16 89.0 90 52.2
Os02g0138100 Oryza sativa ssp. japonica HOM05D007341 ORTHO05D009075 6.5e-16 88.2 84 53.6
MCO04G269 Micromonas commoda HOM05D007341 ORTHO05D009075 8.5e-16 87.8 156 37.2
MBI13_g34919_MAGBIO Magnolia biondii HOM05D007341 ORTHO05D009075 2.3e-13 79.7 84 57.1
AagrBONN_evm.TU.Sc2ySwM_368.1307 Anthoceros agrestis HOM05D007341 ORTHO05D009075 2.0e-12 76.6 63 60.3
PRCOL_00000561 Prasinoderma coloniale HOM05D007341 ORTHO05D009075 1.4e-10 70.5 174 33.3
Ah.08g218010 Amaranthus hybridus HOM05D007341 ORTHO05D009075 1.8e-10 70.1 101 44.6
Zm00001eb231900 Zea mays HOM05D007341 ORTHO05D009075 4.2e-07 58.9 116 34.5


User provided reference genes

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