Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015607 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 1.7e-61 239.2 127 100.0
CSS0044713 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 3.3e-28 128.6 127 63.8
CSS0014692 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 2.2e-24 115.9 134 59.0
CSS0022093 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 8.4e-24 114.0 134 53.0
CSS0001263 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 2.5e-20 102.4 127 56.7
CSS0044305 Camellia sinensis var. sinensis HOM05D005006 ORTHO05D005903 9.4e-15 84.0 126 51.6
Solyc08g082090.1 Solanum lycopersicum HOM05D005006 ORTHO05D005903 1.2e-09 67.0 147 38.1
Sopen08g030380 Solanum pennellii HOM05D005006 ORTHO05D005903 1.2e-09 67.0 147 38.1
Cc08_g15850 Coffea canephora HOM05D005006 ORTHO05D005903 2.0e-09 66.2 93 47.3
PGSC0003DMG400012296 Solanum tuberosum HOM05D005006 ORTHO05D005903 3.4e-09 65.5 147 37.4
Dinv37546 Davidia involucrata HOM05D005006 ORTHO05D005903 7.7e-09 64.3 143 36.4
TAR629G3139 Trochodendron aralioides HOM05D005006 ORTHO05D005903 7.7e-09 64.3 137 35.0
Oeu061095.1 Olea europaea HOM05D005006 ORTHO05D005903 1.1e-07 60.5 132 37.9
Manes.02G011900 Manihot esculenta HOM05D005006 ORTHO05D005903 2.5e-07 59.3 136 33.1
Rhsim07G0083400 Rhododendron simsii HOM05D005006 ORTHO05D005903 4.2e-07 58.5 134 33.6
Rhsim02G0241500 Rhododendron simsii HOM05D005006 ORTHO05D005903 9.4e-07 57.4 99 45.5
FAN04G1712 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.2e-06 57.0 99 35.4
FAN04G3134 Fragaria x ananassa HOM05D005006 ORTHO05D005903 1.2e-06 57.0 99 35.4
Potri.001G093500 Populus trichocarpa HOM05D005006 ORTHO05D005903 1.2e-06 57.0 132 34.8
RcHm_v2.0_Chr7g0195351 Rosa chinensis HOM05D005006 ORTHO05D005903 2.1e-06 56.2 136 30.9
PGR031G0908 Punica granatum HOM05D005006 ORTHO05D005903 2.7e-06 55.8 101 37.6
CiPaw.11G123200 Carya illinoinensis HOM05D005006 ORTHO05D005903 3.6e-06 55.5 137 33.6
Gohir.A08G085100 Gossypium hirsutum HOM05D005006 ORTHO05D005903 3.6e-06 55.5 146 35.6
Manes.01G045300 Manihot esculenta HOM05D005006 ORTHO05D005903 6.1e-06 54.7 139 35.3
FAN13G1208 Fragaria x ananassa HOM05D005006 ORTHO05D005903 7.9e-06 54.3 134 29.9
FAN18G0263 Fragaria x ananassa HOM05D005006 ORTHO05D005903 7.9e-06 54.3 134 29.9


User provided reference genes

Program Settings