Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015603 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 6.1e-55 217.2 110 100.0
CSS0001505 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.3e-40 167.9 108 82.4
CSS0045153 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 5.2e-38 161.0 106 82.1
CSS0049977 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 8.9e-38 160.2 98 85.7
CSS0016211 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 4.4e-37 157.9 103 81.6
CSS0040497 Camellia sinensis var. sinensis HOM05D007293 ORTHO05D009143 3.2e-35 151.8 106 80.2
vmacro05819 Vaccinium macrocarpon HOM05D007293 ORTHO05D009143 6.0e-26 120.9 105 65.7
Dinv33495 Davidia involucrata HOM05D007293 ORTHO05D009143 8.6e-25 117.1 110 59.1
Rhsim10G0022800 Rhododendron simsii HOM05D007293 ORTHO05D009143 4.3e-24 114.8 105 63.8
MSTRG.24016 Avicennia marina HOM05D007293 ORTHO05D009143 1.6e-23 112.8 108 61.1
Dinv35058 Davidia involucrata HOM05D007293 ORTHO05D009143 1.1e-22 110.2 106 59.4
Migut.H00123 Erythranthe guttata HOM05D007293 ORTHO05D009143 8.4e-20 100.5 107 58.9
Cc07_g02290 Coffea canephora HOM05D007293 ORTHO05D009143 1.4e-19 99.8 105 55.2
Oeu062917.1 Olea europaea HOM05D007293 ORTHO05D009143 5.4e-19 97.8 104 56.7
GSVIVG01032483001 Vitis vinifera HOM05D007293 ORTHO05D009143 1.7e-17 92.8 110 52.7
Migut.K01369 Erythranthe guttata HOM05D007293 ORTHO05D009143 5.1e-17 91.3 105 57.1
Lj7A591G78 Lonicera japonica HOM05D007293 ORTHO05D009143 8.7e-17 90.5 111 53.2
Actinidia06026 Actinidia chinensis HOM05D007293 ORTHO05D009143 4.7e-15 84.7 60 73.3
Hma1.2p1_0802F.1_g220360 Hydrangea macrophylla HOM05D007293 ORTHO05D009143 4.7e-15 84.7 106 57.5
SalBow1G2453 Salvia bowleyana HOM05D005882 ORTHO05D009143 2.4e-14 82.4 97 58.8
DCAR_011205 Daucus carota HOM05D007293 ORTHO05D009143 4.0e-14 81.6 110 48.2
Lsat_1_v5_gn_4_182280 Lactuca sativa HOM05D007293 ORTHO05D009143 5.2e-14 81.3 103 48.5
ECA246G2262 Erigeron canadensis HOM05D007293 ORTHO05D009143 6.9e-14 80.9 99 50.5
HanXRQChr08g0220621 Helianthus annuus HOM05D007293 ORTHO05D009143 1.2e-13 80.1 103 47.6
Atru.chr11.2025 Acer truncatum HOM05D007293 ORTHO05D009143 1.3e-12 76.6 103 48.5
TWI75G0451 Tripterygium wilfordii HOM05D007293 ORTHO05D009143 1.3e-12 76.6 108 48.1
MD13G1091900 Malus domestica HOM05D007293 ORTHO05D009143 4.9e-12 74.7 103 45.6
THA.LOC104822141 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 4.9e-12 74.7 103 46.6
EL10Ac6g13673 Beta vulgaris HOM05D007293 ORTHO05D009143 8.4e-12 73.9 101 46.5
RcHm_v2.0_Chr4g0443851 Rosa chinensis HOM05D007293 ORTHO05D009143 1.9e-11 72.8 103 45.6
Aqoxy3G02974 Aquilegia oxysepala HOM05D007293 ORTHO05D009143 2.4e-11 72.4 108 50.9
CANSAT01G1482 Cannabis sativa HOM05D007293 ORTHO05D009143 2.4e-11 72.4 108 45.4
Ciclev10033010m.g Citrus clementina HOM05D007293 ORTHO05D009143 2.4e-11 72.4 103 47.6
THA.LOC104808972 Tarenaya hassleriana HOM05D007293 ORTHO05D009143 5.4e-11 71.2 106 46.2
TAR622G0242 Trochodendron aralioides HOM05D007293 ORTHO05D009143 5.4e-11 71.2 106 50.0
MD16G1092500 Malus domestica HOM05D007293 ORTHO05D009143 7.1e-11 70.9 103 44.7
Thecc.02G249100 Theobroma cacao HOM05D007293 ORTHO05D009143 1.6e-10 69.7 103 43.7
Carub.0002s1704 Capsella rubella HOM05D007293 ORTHO05D009143 3.5e-10 68.6 105 44.8
RcHm_v2.0_Chr4g0443841 Rosa chinensis HOM05D007293 ORTHO05D009143 3.5e-10 68.6 109 44.0
Hund05995 Selenicereus undatus HOM05D007293 ORTHO05D009143 3.5e-10 68.6 105 46.7
Nn3g16892 Nelumbo nucifera HOM05D007293 ORTHO05D009143 4.6e-10 68.2 45 71.1
CDE06G2495 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 7.8e-10 67.4 104 45.2
FvH4_4g34460 Fragaria vesca HOM05D007293 ORTHO05D009143 7.8e-10 67.4 103 42.7
FAN12G1260 Fragaria x ananassa HOM05D007293 ORTHO05D009143 7.8e-10 67.4 103 42.7
FAN17G1887 Fragaria x ananassa HOM05D007293 ORTHO05D009143 7.8e-10 67.4 106 45.3
FAN22G1529 Fragaria x ananassa HOM05D007293 ORTHO05D009143 7.8e-10 67.4 106 45.3
CiPaw.05G150900 Carya illinoinensis HOM05D007293 ORTHO05D009143 1.0e-09 67.0 104 47.1
Thhalv10019350m.g Eutrema salsugineum HOM05D007293 ORTHO05D009143 1.0e-09 67.0 104 45.2
Phvul.002G071600 Phaseolus vulgaris HOM05D007293 ORTHO05D009143 1.0e-09 67.0 104 46.2
Sp5g25470 Schrenkiella parvula HOM05D007293 ORTHO05D009143 1.0e-09 67.0 105 43.8
AL2G29660 Arabidopsis lyrata HOM05D007293 ORTHO05D009143 1.3e-09 66.6 105 42.9
BcaC08g45820 Brassica carinata HOM05D007293 ORTHO05D009143 1.3e-09 66.6 102 45.1
AUR62014041 Chenopodium quinoa HOM05D007293 ORTHO05D009143 1.3e-09 66.6 94 44.7
ClCG08G018060 Citrullus lanatus HOM05D007293 ORTHO05D009143 1.3e-09 66.6 103 44.7
AT1G70350 Arabidopsis thaliana HOM05D007293 ORTHO05D009143 1.7e-09 66.2 105 42.9
CARHR063530 Cardamine hirsuta HOM05D007293 ORTHO05D009143 2.3e-09 65.9 105 42.9
Manes.13G030700 Manihot esculenta HOM05D007293 ORTHO05D009143 3.0e-09 65.5 115 40.9
PSO063G5020 Papaver somniferum HOM05D007293 ORTHO05D009143 3.0e-09 65.5 101 46.5
Psat0s2875g0160 Pisum sativum HOM05D007293 ORTHO05D009143 3.0e-09 65.5 103 44.7
BolC6t38732H Brassica oleracea HOM05D007293 ORTHO05D009143 3.9e-09 65.1 100 45.0
MBI10_g11075_MAGBIO Magnolia biondii HOM05D007293 ORTHO05D009143 3.9e-09 65.1 65 53.8
C06p36130 Brassica napus HOM05D007293 ORTHO05D009143 5.1e-09 64.7 100 45.0
CDE04G1122 Ceratophyllum demersum HOM05D007293 ORTHO05D009143 5.1e-09 64.7 57 59.6
Eucgr.H02610 Eucalyptus grandis HOM05D007293 ORTHO05D009143 5.1e-09 64.7 103 43.7
Sc04g0009130 Simmondsia chinensis HOM05D007293 ORTHO05D009143 6.6e-09 64.3 44 68.2
AUR62005378 Chenopodium quinoa HOM05D007293 ORTHO05D009143 8.7e-09 63.9 83 50.6
Duzib251G0045 Durio zibethinus HOM05D007293 ORTHO05D009143 8.7e-09 63.9 101 45.5
Gorai.005G182700 Gossypium raimondii HOM05D007293 ORTHO05D009143 8.7e-09 63.9 104 46.2
Prupe.1G253900 Prunus persica HOM05D007293 ORTHO05D009143 8.7e-09 63.9 103 41.7
A02p16490 Brassica napus HOM05D007293 ORTHO05D009143 1.1e-08 63.5 104 43.3
BraA02t06707Z Brassica rapa HOM05D007293 ORTHO05D009143 1.1e-08 63.5 104 43.3
Gohir.D02G162700 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.1e-08 63.5 104 46.2
C02p27590 Brassica napus HOM05D007293 ORTHO05D009143 1.5e-08 63.2 104 43.3
Cfa009144 Carpinus fangiana HOM05D007293 ORTHO05D009143 1.5e-08 63.2 104 41.3
Gohir.A03G139900 Gossypium hirsutum HOM05D007293 ORTHO05D009143 1.5e-08 63.2 104 46.2
COL.COLO4_36768 Corchorus olitorius HOM05D007293 ORTHO05D009143 2.5e-08 62.4 101 46.5
Psat2g106240 Pisum sativum HOM05D007293 ORTHO05D009143 2.5e-08 62.4 103 42.7
PGR119G0124 Punica granatum HOM05D007293 ORTHO05D009143 2.5e-08 62.4 106 41.5
HPP92_019952 Vanilla planifolia HOM05D007293 ORTHO05D009143 4.3e-08 61.6 46 65.2
BcaB03g15542 Brassica carinata HOM05D007293 ORTHO05D009143 5.6e-08 61.2 105 44.8
Glyma.02G034600 Glycine max HOM05D007293 ORTHO05D009143 5.6e-08 61.2 104 42.3
Lj2g0011400 Lotus japonicus HOM05D007293 ORTHO05D009143 5.6e-08 61.2 106 39.6
BcaB05g24561 Brassica carinata HOM05D007293 ORTHO05D009143 7.3e-08 60.8 103 43.7
BcaC03g15179 Brassica carinata HOM05D007293 ORTHO05D009143 7.3e-08 60.8 104 43.3
PSO339G0117 Papaver somniferum HOM05D007293 ORTHO05D009143 7.3e-08 60.8 99 43.4
Prupe.5G015600 Prunus persica HOM05D007293 ORTHO05D009143 7.3e-08 60.8 107 40.2
Duzib268G1575 Durio zibethinus HOM05D007293 ORTHO05D009143 1.6e-07 59.7 103 38.8
PSO832G1108 Papaver somniferum HOM05D007293 ORTHO05D009143 2.8e-07 58.9 101 45.5
VMungo1215G2593 Vigna mungo HOM05D007293 ORTHO05D009143 2.8e-07 58.9 100 46.0
BolC2t08814H Brassica oleracea HOM05D007293 ORTHO05D009143 3.6e-07 58.5 105 41.9
Lalb_Chr09g0326381 Lupinus albus HOM05D007293 ORTHO05D009143 4.8e-07 58.2 104 41.3
QL03p061237 Quercus lobata HOM05D007293 ORTHO05D009143 4.8e-07 58.2 110 44.5
TPR.G13583 Trifolium pratense HOM05D007293 ORTHO05D009143 4.8e-07 58.2 109 40.4
Haze_12178 Corylus avellana HOM05D007293 ORTHO05D009143 6.2e-07 57.8 101 42.6
TPR.G13591 Trifolium pratense HOM05D007293 ORTHO05D009143 6.2e-07 57.8 104 42.3
CsaV3_4G037870 Cucumis sativus L. HOM05D001719 ORTHO05D008883 8.1e-07 57.4 100 44.0
Medtr5g034340 Medicago truncatula HOM05D007293 ORTHO05D009143 2.4e-06 55.8 104 40.4
Os01g0738000 Oryza sativa ssp. japonica HOM05D007293 ORTHO05D009143 4.0e-06 55.1 105 41.9
ATR0730G001 Amborella trichopoda HOM05D007293 ORTHO05D009143 5.3e-06 54.7 60 55.0
A07p31100 Brassica napus HOM05D007293 ORTHO05D009143 5.3e-06 54.7 102 40.2
BraA07t30744Z Brassica rapa HOM05D007293 ORTHO05D009143 5.3e-06 54.7 102 40.2
Ca_13998_v3 Cicer arietinum L. HOM05D007293 ORTHO05D009143 5.3e-06 54.7 100 44.0


User provided reference genes

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