Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015595 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 4.1e-167 591.3 289 100.0
CSS0035863 Camellia sinensis var. sinensis HOM05D006424 ORTHO05D007945 1.6e-139 499.6 301 85.4
Actinidia08796 Actinidia chinensis HOM05D006424 ORTHO05D007945 1.8e-130 469.5 287 81.2
Actinidia15982 Actinidia chinensis HOM05D006424 ORTHO05D007945 2.4e-130 469.2 287 79.8
Rhsim12G0191200 Rhododendron simsii HOM05D006424 ORTHO05D007945 2.1e-123 446.0 287 76.0
Hma1.2p1_0042F.1_g025600 Hydrangea macrophylla HOM05D006424 ORTHO05D007945 1.2e-121 440.3 289 75.1
Cpa.g.sc10.267 Carica papaya HOM05D006424 ORTHO05D007945 1.9e-119 433.0 285 71.2
TAR383G1051 Trochodendron aralioides HOM05D006424 ORTHO05D007945 1.9e-119 433.0 287 72.8
QL05p029818 Quercus lobata HOM05D006424 ORTHO05D007945 2.4e-119 432.6 285 73.3
GSVIVG01017340001 Vitis vinifera HOM05D006424 ORTHO05D007945 3.5e-118 428.7 287 71.8
Lj9A500T81 Lonicera japonica HOM05D006424 ORTHO05D007945 6.0e-118 427.9 248 79.4
Manes.11G056800 Manihot esculenta HOM05D006424 ORTHO05D007945 6.2e-115 417.9 289 69.6
Nitab4.5_0009497g0010 Nicotiana tabacum HOM05D006424 ORTHO05D007945 8.1e-115 417.5 272 72.8
Peaxi162Scf00034g01413 Petunia axillaris HOM05D006424 ORTHO05D007945 1.1e-114 417.2 274 72.3
Manes.04G112700 Manihot esculenta HOM05D006424 ORTHO05D007945 1.4e-114 416.8 281 70.8
Potri.001G204300 Populus trichocarpa HOM05D006424 ORTHO05D007945 3.1e-114 415.6 284 69.4
CANSAT56G3050 Cannabis sativa HOM05D006424 ORTHO05D007945 9.0e-114 414.1 285 70.2
ClCG09G002940 Citrullus lanatus HOM05D006424 ORTHO05D007945 1.5e-113 413.3 288 69.8
Ciclev10026222m.g Citrus clementina HOM05D006424 ORTHO05D007945 1.5e-113 413.3 287 67.9
CiPaw.02G157300 Carya illinoinensis HOM05D006424 ORTHO05D007945 4.5e-113 411.8 281 71.2
Sed0012965 Sechium edule HOM05D006424 ORTHO05D007945 4.5e-113 411.8 288 69.8
CiPaw.01G248200 Carya illinoinensis HOM05D006424 ORTHO05D007945 1.7e-112 409.8 281 69.8
Atru.chr1.2950 Acer truncatum HOM05D006424 ORTHO05D007945 2.2e-112 409.5 287 68.3
Eucgr.F03876 Eucalyptus grandis HOM05D006424 ORTHO05D007945 2.2e-112 409.5 278 70.1
PGSC0003DMG402028626 Solanum tuberosum HOM05D006424 ORTHO05D007945 2.2e-112 409.5 280 68.9
VMungo0331G1912 Vigna mungo HOM05D006424 ORTHO05D007945 2.9e-112 409.1 285 68.4
Cfa001961 Carpinus fangiana HOM05D006424 ORTHO05D007945 4.9e-112 408.3 282 69.5
Duzib192G0907 Durio zibethinus HOM05D006424 ORTHO05D007945 4.9e-112 408.3 273 70.3
Gorai.010G225400 Gossypium raimondii HOM05D006424 ORTHO05D007945 8.4e-112 407.5 255 72.9
Nn2g12084 Nelumbo nucifera HOM05D006424 ORTHO05D007945 8.4e-112 407.5 287 68.3
COL.COLO4_11949 Corchorus olitorius HOM05D006424 ORTHO05D007945 1.1e-111 407.1 287 68.3
Thecc.06G024200 Theobroma cacao HOM05D006424 ORTHO05D007945 1.9e-111 406.4 286 68.2
MD17G1212100 Malus domestica HOM05D006424 ORTHO05D007945 2.4e-111 406.0 283 70.3
Nn8g39504 Nelumbo nucifera HOM05D006424 ORTHO05D007945 2.4e-111 406.0 287 68.6
Phvul.010G156300 Phaseolus vulgaris HOM05D006424 ORTHO05D007945 3.2e-111 405.6 285 67.7
RcHm_v2.0_Chr2g0135411 Rosa chinensis HOM05D006424 ORTHO05D007945 3.2e-111 405.6 281 70.8
Gohir.A06G185600 Gossypium hirsutum HOM05D006424 ORTHO05D007945 7.1e-111 404.4 288 68.8
Gohir.D06G192200 Gossypium hirsutum HOM05D006424 ORTHO05D007945 7.1e-111 404.4 288 68.8
FAN05G3690 Fragaria x ananassa HOM05D006424 ORTHO05D007945 9.3e-111 404.1 281 69.8
Solyc12g042770.3 Solanum lycopersicum HOM05D006424 ORTHO05D007945 1.2e-110 403.7 280 67.9
MELO3C023426.2 Cucumis melo HOM05D006424 ORTHO05D007945 2.1e-110 402.9 287 67.9
Prupe.3G087300 Prunus persica HOM05D006424 ORTHO05D007945 2.1e-110 402.9 285 69.5
Sopen12g021950 Solanum pennellii HOM05D006424 ORTHO05D007945 2.7e-110 402.5 280 67.5
Cc04_g04390 Coffea canephora HOM05D006424 ORTHO05D007945 3.5e-110 402.1 288 67.0
Oeu039429.1 Olea europaea HOM05D006424 ORTHO05D007945 3.5e-110 402.1 247 74.9
FAN02G1519 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-109 400.2 287 68.3
FAN14G0356 Fragaria x ananassa HOM05D006424 ORTHO05D007945 1.3e-109 400.2 262 72.5
Glyma.08G213000 Glycine max HOM05D006424 ORTHO05D007945 1.3e-109 400.2 286 68.2
Haze_16559 Corylus avellana HOM05D006424 ORTHO05D007945 2.3e-109 399.4 306 64.1
MBI04_g29330_MAGBIO Magnolia biondii HOM05D006424 ORTHO05D007945 2.3e-109 399.4 285 69.1
Sabra01G0157400 Salix brachista HOM05D006424 ORTHO05D007945 5.1e-109 398.3 280 68.2
CsaV3_7G032330 Cucumis sativus L. HOM05D006424 ORTHO05D007945 8.7e-109 397.5 288 67.0
TWI12G0141 Tripterygium wilfordii HOM05D006424 ORTHO05D007945 1.1e-108 397.1 287 65.5
Glyma.07G029900 Glycine max HOM05D006424 ORTHO05D007945 1.5e-108 396.7 282 68.4
PGR102G1391 Punica granatum HOM05D006424 ORTHO05D007945 1.5e-108 396.7 291 66.7
HanXRQChr04g0097881 Helianthus annuus HOM05D006424 ORTHO05D007945 3.3e-108 395.6 288 66.3
Migut.I00764 Erythranthe guttata HOM05D006424 ORTHO05D007945 5.6e-108 394.8 272 66.5
THA.LOC104810510 Tarenaya hassleriana HOM05D006424 ORTHO05D007945 5.6e-108 394.8 287 66.6
Ca_20445_v3 Cicer arietinum L. HOM05D006424 ORTHO05D007945 7.4e-108 394.4 287 66.9
Lalb_Chr04g0262371 Lupinus albus HOM05D006424 ORTHO05D007945 1.3e-107 393.7 288 67.4
Lj3g0018478 Lotus japonicus HOM05D006424 ORTHO05D007945 2.1e-107 392.9 287 67.2
ATR0322G065 Amborella trichopoda HOM05D006424 ORTHO05D007945 3.7e-107 392.1 252 69.8
ECA247G2617 Erigeron canadensis HOM05D006424 ORTHO05D007945 6.2e-107 391.3 271 66.8
MSTRG.22746 Avicennia marina HOM05D006424 ORTHO05D007945 1.1e-106 390.6 279 67.7
AUR62016338 Chenopodium quinoa HOM05D006424 ORTHO05D007945 1.1e-106 390.6 279 69.2
Aqoxy7G03662 Aquilegia oxysepala HOM05D006424 ORTHO05D007945 1.4e-106 390.2 287 66.6
Medtr4g010140 Medicago truncatula HOM05D006424 ORTHO05D007945 5.3e-106 388.3 285 66.0
vmacro16897 Vaccinium macrocarpon HOM05D006424 ORTHO05D007945 5.3e-106 388.3 257 72.8
PSO210G3245 Papaver somniferum HOM05D006424 ORTHO05D007945 1.2e-105 387.1 290 65.5
PSO210G5365 Papaver somniferum HOM05D006424 ORTHO05D007945 1.5e-105 386.7 290 65.9
AUR62011520 Chenopodium quinoa HOM05D006424 ORTHO05D007945 3.4e-105 385.6 280 68.6
Nitab4.5_0003157g0020 Nicotiana tabacum HOM05D006424 ORTHO05D007945 7.6e-105 384.4 277 68.6
DCAR_021344 Daucus carota HOM05D006424 ORTHO05D007945 2.2e-104 382.9 286 64.7
A05p33570 Brassica napus HOM05D006424 ORTHO05D007945 6.4e-104 381.3 256 67.6
BcaB06g25691 Brassica carinata HOM05D006424 ORTHO05D007945 1.4e-103 380.2 256 67.2
BolC5t33801H Brassica oleracea HOM05D006424 ORTHO05D007945 1.4e-103 380.2 256 67.2
Aa31LG8G3030 Aethionema arabicum HOM05D006424 ORTHO05D007945 2.5e-103 379.4 265 65.7
BcaC05g28929 Brassica carinata HOM05D006424 ORTHO05D007945 2.5e-103 379.4 256 67.2
C05p50560 Brassica napus HOM05D006424 ORTHO05D007945 2.5e-103 379.4 256 67.2
A03p39490 Brassica napus HOM05D006424 ORTHO05D007945 9.3e-103 377.5 223 73.1
AT3G15840 Arabidopsis thaliana HOM05D006424 ORTHO05D007945 2.7e-102 375.9 265 65.7
Lsat_1_v5_gn_1_34401 Lactuca sativa HOM05D006424 ORTHO05D007945 6.0e-102 374.8 319 59.2
C03p47890 Brassica napus HOM05D006424 ORTHO05D007945 7.9e-102 374.4 206 77.7
Sp3g14150 Schrenkiella parvula HOM05D006424 ORTHO05D007945 7.9e-102 374.4 282 63.1
BraA05t22180Z Brassica rapa HOM05D006424 ORTHO05D007945 1.0e-101 374.0 256 66.8
CARHR090930 Cardamine hirsuta HOM05D006424 ORTHO05D007945 1.3e-101 373.6 282 62.1
Carub.0003s1558 Capsella rubella HOM05D006424 ORTHO05D007945 3.0e-101 372.5 270 63.0
Thhalv10022443m.g Eutrema salsugineum HOM05D006424 ORTHO05D007945 5.1e-101 371.7 282 63.5
Ah.01g020600 Amaranthus hybridus HOM05D006424 ORTHO05D007945 6.7e-101 371.3 207 79.7
TPR.G38617 Trifolium pratense HOM05D001630 ORTHO05D007945 6.7e-101 371.3 282 64.2
BraA03t13099Z Brassica rapa HOM05D006424 ORTHO05D007945 1.1e-100 370.5 223 72.2
AL3G28500 Arabidopsis lyrata HOM05D006424 ORTHO05D007945 7.4e-100 367.9 282 62.8
BcaC01g03854 Brassica carinata HOM05D006424 ORTHO05D007945 1.3e-99 367.1 199 78.9
FvH4_6g29710 Fragaria vesca HOM05D006424 ORTHO05D007945 1.1e-98 364.0 193 83.4
FAN09G3401 Fragaria x ananassa HOM05D006424 ORTHO05D007945 6.9e-98 361.3 263 66.9
CAN.G47.13 Capsicum annuum HOM05D006424 ORTHO05D007945 9.0e-98 360.9 207 75.8
CDE07G1654 Ceratophyllum demersum HOM05D006424 ORTHO05D007945 1.5e-97 360.1 287 63.1
BolC3t17067H Brassica oleracea HOM05D006424 ORTHO05D007945 5.8e-97 358.2 311 56.9
unitig_27.g24949 Utricularia gibba HOM05D006424 ORTHO05D007945 2.2e-96 356.3 282 62.1
arahy.Tifrunner.gnm1.ann1.92ZGJC Arachis hypogaea HOM05D006424 ORTHO05D007945 1.1e-95 354.0 287 61.3
Os03g0586500 Oryza sativa ssp. japonica HOM05D006424 ORTHO05D007945 3.9e-93 345.5 217 69.1
Zm00001eb049190 Zea mays HOM05D006424 ORTHO05D007945 2.2e-91 339.7 209 71.8
Dinv38123 Davidia involucrata HOM05D006424 ORTHO05D007945 3.4e-89 332.4 212 75.0
Zm00001eb219530 Zea mays HOM05D006424 ORTHO05D007945 7.7e-89 331.3 244 63.1
SalBow2G1302 Salvia bowleyana HOM05D006424 ORTHO05D007945 9.1e-82 307.8 287 56.4
Thecc.06G024600 Theobroma cacao HOM05D006424 ORTHO05D007945 7.4e-76 288.1 210 66.2
Mapoly0024s0088 Marchantia polymorpha HOM05D006424 ORTHO05D007945 3.1e-74 282.7 284 48.6
Pp3c22_2660 Physcomitrium patens HOM05D006424 ORTHO05D007945 1.7e-72 276.9 254 51.6
Pp3c9_11540 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.8e-72 275.8 289 48.4
CBR_g38381 Chara braunii HOM05D006424 ORTHO05D007945 3.2e-71 272.7 266 50.8
Sed0007474 Sechium edule HOM05D006424 ORTHO05D007945 9.4e-71 271.2 211 63.0
Thecc.K0004600 Theobroma cacao HOM05D006424 ORTHO05D007945 9.7e-68 261.2 146 78.8
AagrBONN_evm.TU.Sc2ySwM_344.5484 Anthoceros agrestis HOM05D006424 ORTHO05D007945 2.8e-67 259.6 224 52.7
SMO331G0083 Selaginella moellendorffii HOM05D006424 ORTHO05D007945 1.4e-66 257.3 205 53.7
Hund06560 Selenicereus undatus HOM05D006424 ORTHO05D007945 2.3e-61 240.0 242 53.3
Pp3c15_11500 Physcomitrium patens HOM05D006424 ORTHO05D007945 3.2e-55 219.5 242 46.7
SEGI_16074 Sequoiadendron giganteum HOM05D006424 ORTHO05D007945 2.7e-54 216.5 156 59.0
arahy.Tifrunner.gnm1.ann1.7R86JN Arachis hypogaea HOM05D006424 ORTHO05D007945 1.2e-49 201.1 287 42.9
Psat7g257120 Pisum sativum HOM05D006424 ORTHO05D007945 2.1e-46 190.3 179 57.0
QL05p029868 Quercus lobata HOM05D006424 ORTHO05D007945 3.4e-44 183.0 153 63.4
EL10Ac9g21901 Beta vulgaris HOM05D006424 ORTHO05D007945 8.3e-43 178.3 174 58.6
Oeu000425.1 Olea europaea HOM05D006424 ORTHO05D007945 8.9e-29 131.7 151 50.3
QL05p029832 Quercus lobata HOM05D006424 ORTHO05D007945 4.6e-25 119.4 70 75.7
arahy.Tifrunner.gnm1.ann1.ZYH6JG Arachis hypogaea HOM05D006424 ORTHO05D007945 1.2e-17 94.7 56 75.0
arahy.Tifrunner.gnm1.ann1.YP381G Arachis hypogaea HOM05D006424 ORTHO05D007945 1.9e-10 70.9 37 83.8


User provided reference genes

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