Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015594 Camellia sinensis var. sinensis HOM05D001966 ORTHO05D010986 2.1e-27 124.8 57 100.0
Hma1.2p1_0594F.1_g185800 Hydrangea macrophylla HOM05D001966 ORTHO05D010986 1.3e-21 105.5 63 81.0
FAN26G1474 Fragaria x ananassa HOM05D001966 ORTHO05D010986 2.3e-21 104.8 63 81.0
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 2.5e-20 101.3 62 79.0
Aqoxy38s012 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 7.4e-20 99.8 63 77.8
Aqoxy4G02030 Aquilegia oxysepala HOM05D001966 ORTHO05D010986 7.4e-20 99.8 63 77.8
Cfa023005 Carpinus fangiana HOM05D001966 ORTHO05D010986 7.4e-20 99.8 63 77.8
CsaV3_UNG196500 Cucumis sativus L. HOM05D001966 ORTHO05D010986 1.6e-19 98.6 63 77.8
Sed0001789 Sechium edule HOM05D001966 ORTHO05D010986 1.6e-19 98.6 63 77.8
Sed0007694 Sechium edule HOM05D001966 ORTHO05D010986 1.6e-19 98.6 63 77.8
Sed0023467 Sechium edule HOM05D001966 ORTHO05D010986 1.6e-19 98.6 63 77.8
Sed0025793 Sechium edule HOM05D001966 ORTHO05D010986 1.6e-19 98.6 63 77.8
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 4.8e-19 97.1 63 74.6
Cpa.g.sc23.86 Carica papaya HOM05D001966 ORTHO05D010986 6.3e-19 96.7 63 76.2
Sc05g0004140 Simmondsia chinensis HOM05D001966 ORTHO05D011119 1.8e-18 95.1 63 73.0
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.3e-16 89.0 63 68.3
Peaxi162Scf00994g00002 Petunia axillaris HOM05D001966 ORTHO05D010986 1.4e-15 85.5 44 90.9
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 7.2e-15 83.2 54 75.9
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 7.2e-15 83.2 54 75.9
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 7.2e-15 83.2 54 75.9
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 7.2e-15 83.2 54 75.9
ClCG09G021430 Citrullus lanatus HOM05D001966 ORTHO05D010986 1.6e-14 82.0 41 92.7
Peaxi162Scf01600g00007 Petunia axillaris HOM05D001966 ORTHO05D010986 2.7e-14 81.3 44 86.4
FAN01G2668 Fragaria x ananassa HOM05D001966 ORTHO05D007227 6.1e-14 80.1 44 86.4
Nitab4.5_0004137g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.0e-13 79.3 44 86.4
Lsat_1_v5_gn_3_13340 Lactuca sativa HOM05D001966 ORTHO05D007227 1.5e-12 75.5 41 85.4
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 3.3e-12 74.3 62 64.5
Nitab4.5_0001761g0140 Nicotiana tabacum HOM05D001966 ORTHO05D010986 3.3e-12 74.3 44 81.8
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 4.3e-12 73.9 44 79.5
Nitab4.5_0001986g0110 Nicotiana tabacum HOM05D001966 ORTHO05D010986 9.7e-12 72.8 43 81.4
Oeu041412.1 Olea europaea HOM05D001966 ORTHO05D010986 9.7e-12 72.8 41 85.4
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 6.3e-11 70.1 58 62.1
COL.COLO4_03213 Corchorus olitorius HOM05D001966 ORTHO05D010986 8.2e-11 69.7 59 64.4
BolSC29t60538H Brassica oleracea HOM05D008016 ORTHO05D010986 1.0e-08 62.8 59 59.3
BolSC49t61132H Brassica oleracea HOM05D001966 ORTHO05D010986 1.0e-08 62.8 59 59.3
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 1.0e-08 62.8 47 66.0
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 5.0e-08 60.5 43 69.8
arahy.Tifrunner.gnm1.ann1.92D98S Arachis hypogaea HOM05D000533 ORTHO05D006151 5.0e-08 60.5 41 70.7
arahy.Tifrunner.gnm1.ann1.FN06MZ Arachis hypogaea HOM05D000533 ORTHO05D006151 5.0e-08 60.5 41 70.7
arahy.Tifrunner.gnm1.ann1.JR5HFJ Arachis hypogaea HOM05D000533 ORTHO05D006151 5.0e-08 60.5 41 70.7
arahy.Tifrunner.gnm1.ann1.LY649L Arachis hypogaea HOM05D001966 ORTHO05D010986 5.0e-08 60.5 41 70.7
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 5.0e-08 60.5 41 70.7
BcaB02g11353 Brassica carinata HOM05D007952 ORTHO05D009823 5.0e-08 60.5 43 69.8
BcaNung07085 Brassica carinata HOM05D001966 ORTHO05D010449 5.0e-08 60.5 43 69.8
CARHR282380 Cardamine hirsuta HOM05D001966 ORTHO05D010986 5.0e-08 60.5 43 69.8
CARHR282500 Cardamine hirsuta HOM05D001966 ORTHO05D010986 5.0e-08 60.5 43 69.8
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 1.4e-07 58.9 40 70.0
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.4e-07 58.9 40 70.0
VMungo1233G0001 Vigna mungo HOM05D001966 ORTHO05D010986 1.9e-07 58.5 41 68.3
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 3.2e-07 57.8 40 70.0
Nitab4.5_0000002g0300 Nicotiana tabacum HOM05D001966 ORTHO05D010055 4.2e-07 57.4 37 70.3
Nitab4.5_0006502g0080 Nicotiana tabacum HOM05D001966 ORTHO05D010986 7.2e-07 56.6 43 67.4
Peaxi162Scf00055g00164 Petunia axillaris HOM05D001966 ORTHO05D010986 7.2e-07 56.6 28 92.9
Psat7g093280 Pisum sativum HOM05D001966 ORTHO05D010986 9.4e-07 56.2 45 66.7
Nitab4.5_0012234g0090 Nicotiana tabacum HOM05D001966 ORTHO05D010986 1.6e-06 55.5 37 75.7
arahy.Tifrunner.gnm1.ann1.X4EL03 Arachis hypogaea HOM05D001966 ORTHO05D010986 2.7e-06 54.7 41 65.9
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.1e-06 53.5 43 67.4


User provided reference genes

Program Settings