Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015566 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.0e-31 138.3 60 100.0
CSS0024264 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.5e-26 121.3 60 88.3
CSS0008176 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.6e-26 120.2 57 89.5
CSS0029440 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.6e-26 120.2 57 89.5
CSS0041206 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 5.6e-26 120.2 57 89.5
CSS0017977 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 7.3e-26 119.8 59 86.4
CSS0048347 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 1.2e-25 119.0 57 89.5
CSS0034492 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 3.6e-25 117.5 57 87.7
CSS0045597 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 8.0e-25 116.3 57 86.0
Dinv16998 Davidia involucrata HOM05D002515 ORTHO05D002722 8.6e-19 96.3 54 68.5
Dinv43153 Davidia involucrata HOM05D002515 ORTHO05D002722 8.6e-19 96.3 54 68.5
Actinidia07036 Actinidia chinensis HOM05D002515 ORTHO05D002722 1.1e-16 89.4 55 69.1
CSS0025806 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 4.4e-15 84.0 57 61.4
Actinidia37204 Actinidia chinensis HOM05D002515 ORTHO05D002722 6.4e-14 80.1 54 61.1
CSS0020060 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.4e-14 80.1 54 63.0
CSS0030774 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 6.4e-14 80.1 54 63.0
CSS0044145 Camellia sinensis var. sinensis HOM05D002515 ORTHO05D002722 2.4e-13 78.2 54 59.3
vmacro03074 Vaccinium macrocarpon HOM05D002515 ORTHO05D002722 4.1e-13 77.4 54 57.4
Rhsim13G0082900 Rhododendron simsii HOM05D002515 ORTHO05D002722 1.6e-12 75.5 54 55.6
Oeu019195.1 Olea europaea HOM05D006354 ORTHO05D007773 3.5e-12 74.3 54 51.9
GSVIVG01024972001 Vitis vinifera HOM05D002515 ORTHO05D002722 1.1e-10 69.3 54 53.7
TAR633G1102 Trochodendron aralioides HOM05D002515 ORTHO05D002722 7.3e-10 66.6 54 53.7
Actinidia13143 Actinidia chinensis HOM05D002515 ORTHO05D002722 9.5e-10 66.2 52 53.8
Migut.D02105 Erythranthe guttata HOM05D002515 ORTHO05D002722 2.1e-09 65.1 48 50.0
Cfa011498 Carpinus fangiana HOM05D002515 ORTHO05D006653 4.7e-09 63.9 54 51.9
HanXRQChr04g0105731 Helianthus annuus HOM05D002515 ORTHO05D002722 2.3e-08 61.6 52 55.8
QL01p032098 Quercus lobata HOM05D002515 ORTHO05D002722 2.3e-08 61.6 49 55.1
Actinidia05311 Actinidia chinensis HOM05D002515 ORTHO05D002722 5.2e-08 60.5 52 53.8
MD11G1109700 Malus domestica HOM05D002515 ORTHO05D002722 1.5e-07 58.9 58 48.3
TAR636G0721 Trochodendron aralioides HOM05D002515 ORTHO05D002722 1.5e-07 58.9 52 48.1
DCAR_005973 Daucus carota HOM05D002515 ORTHO05D002722 2.0e-07 58.5 54 44.4
Prupe.6G078200 Prunus persica HOM05D002515 ORTHO05D002722 2.6e-07 58.2 58 44.8
CANSAT54G1460 Cannabis sativa HOM05D002515 ORTHO05D002722 4.4e-07 57.4 54 48.1
Haze_24092 Corylus avellana HOM05D002515 ORTHO05D002722 4.4e-07 57.4 54 46.3
MELO3C025918.2 Cucumis melo HOM05D002515 ORTHO05D002722 5.8e-07 57.0 48 47.9
Lsat_1_v5_gn_9_23360 Lactuca sativa HOM05D002515 ORTHO05D002722 5.8e-07 57.0 48 45.8
Rhsim04G0156800 Rhododendron simsii HOM05D002515 ORTHO05D002722 5.8e-07 57.0 52 44.2
Rhsim04G0157000 Rhododendron simsii HOM05D002515 ORTHO05D002722 5.8e-07 57.0 52 44.2
CsaV3_6G016870 Cucumis sativus L. HOM05D002515 ORTHO05D002722 7.6e-07 56.6 48 47.9
Cpa.g.sc81.155 Carica papaya HOM05D002515 ORTHO05D002722 9.9e-07 56.2 49 51.0
Dinv35606 Davidia involucrata HOM05D002515 ORTHO05D002722 9.9e-07 56.2 52 48.1
PGR119G0741 Punica granatum HOM05D002515 ORTHO05D002722 9.9e-07 56.2 49 51.0
SalBow3G0449 Salvia bowleyana HOM05D002515 ORTHO05D002722 9.9e-07 56.2 52 44.2
TAR636G1413 Trochodendron aralioides HOM05D002515 ORTHO05D002722 9.9e-07 56.2 52 46.2
Oeu054145.1 Olea europaea HOM05D002515 ORTHO05D002722 1.7e-06 55.5 54 44.4
Ah.15g097300 Amaranthus hybridus HOM05D002515 ORTHO05D002722 2.9e-06 54.7 47 46.8
Lsat_1_v5_gn_8_73101 Lactuca sativa HOM05D002515 ORTHO05D002722 6.4e-06 53.5 46 52.2
Thecc.09G300700 Theobroma cacao HOM05D002515 ORTHO05D002722 6.4e-06 53.5 54 44.4
ECA247G2589 Erigeron canadensis HOM05D002515 ORTHO05D002722 8.4e-06 53.1 47 46.8


User provided reference genes

Program Settings