Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015562 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 5.3e-298 1026.9 522 100.0
CSS0049486 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.2e-217 760.0 556 75.5
CSS0032490 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.6e-217 759.6 555 75.9
CSS0043328 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 4.6e-217 758.1 557 75.0
CSS0023780 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 8.6e-216 753.8 557 75.0
CSS0040630 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 2.0e-212 742.7 584 70.7
Peaxi162Scf00053g00525 Petunia axillaris HOM05D004914 ORTHO05D006512 9.6e-207 723.8 556 71.0
Dinv37416 Davidia involucrata HOM05D004914 ORTHO05D006512 6.9e-205 717.6 551 72.4
MD06G1017300 Malus domestica HOM05D004914 ORTHO05D006512 5.8e-204 714.5 558 70.6
Oeu046797.1 Olea europaea HOM05D004914 ORTHO05D006512 5.8e-204 714.5 563 70.5
Cc08_g05310 Coffea canephora HOM05D004914 ORTHO05D006512 7.6e-204 714.1 558 71.0
Prupe.5G019100 Prunus persica HOM05D004914 ORTHO05D006512 1.4e-202 709.9 559 70.5
MSTRG.25735 Avicennia marina HOM05D004914 ORTHO05D006512 1.9e-202 709.5 558 69.7
Solyc08g075570.4 Solanum lycopersicum HOM05D004914 ORTHO05D006512 2.4e-202 709.1 552 69.9
Lj2g0015407 Lotus japonicus HOM05D004914 ORTHO05D006512 1.2e-201 706.8 558 70.1
PGR042G1968 Punica granatum HOM05D004914 ORTHO05D006512 4.6e-201 704.9 556 70.1
Nn1g02045 Nelumbo nucifera HOM05D004914 ORTHO05D006512 6.0e-201 704.5 557 69.3
SalBow4G0569 Salvia bowleyana HOM05D004914 ORTHO05D006512 6.0e-201 704.5 558 69.5
RcHm_v2.0_Chr7g0213721 Rosa chinensis HOM05D004914 ORTHO05D006512 7.8e-201 704.1 557 70.4
FvH4_5g24140 Fragaria vesca HOM05D004914 ORTHO05D006512 3.0e-200 702.2 557 70.0
HanXRQChr13g0411091 Helianthus annuus HOM05D004914 ORTHO05D006512 8.7e-200 700.7 552 69.4
Potri.003G104000 Populus trichocarpa HOM05D004914 ORTHO05D006512 8.7e-200 700.7 556 69.8
Sopen08g024250 Solanum pennellii HOM05D004914 ORTHO05D006512 8.7e-200 700.7 552 69.6
Eucgr.E01217 Eucalyptus grandis HOM05D004914 ORTHO05D006512 2.5e-199 699.1 556 69.8
Medtr5g026640 Medicago truncatula HOM05D004914 ORTHO05D006512 3.3e-199 698.7 556 69.1
Eucgr.E01216 Eucalyptus grandis HOM05D004914 ORTHO05D006512 4.3e-199 698.4 556 69.6
CiPaw.13G121600 Carya illinoinensis HOM05D004914 ORTHO05D006512 5.6e-199 698.0 556 68.9
ECA240G3397 Erigeron canadensis HOM05D004914 ORTHO05D006512 5.6e-199 698.0 552 68.8
GSVIVG01022810001 Vitis vinifera HOM05D004914 ORTHO05D006512 7.3e-199 697.6 553 69.3
RcHm_v2.0_Chr7g0213811 Rosa chinensis HOM05D004914 ORTHO05D006512 9.6e-199 697.2 557 70.0
TAR375G1103 Trochodendron aralioides HOM05D004914 ORTHO05D006512 1.3e-198 696.8 558 69.5
CANSAT35G0949 Cannabis sativa HOM05D004914 ORTHO05D006512 2.8e-198 695.7 557 68.9
Lalb_Chr05g0215361 Lupinus albus HOM05D004914 ORTHO05D006512 2.8e-198 695.7 556 69.1
Ciclev10000444m.g Citrus clementina HOM05D004914 ORTHO05D006512 3.6e-198 695.3 555 69.4
TPR.G17253 Trifolium pratense HOM05D004914 ORTHO05D006512 3.6e-198 695.3 558 69.0
Nn3g19257 Nelumbo nucifera HOM05D004914 ORTHO05D006512 4.8e-198 694.9 557 69.3
Atru.chr6.2105 Acer truncatum HOM05D004914 ORTHO05D006512 6.2e-198 694.5 561 69.2
Glyma.04G123700 Glycine max HOM05D004914 ORTHO05D006512 1.1e-197 693.7 558 69.2
Lsat_1_v5_gn_5_55660 Lactuca sativa HOM05D004914 ORTHO05D006512 6.9e-197 691.0 552 68.1
Phvul.002G127200 Phaseolus vulgaris HOM05D004914 ORTHO05D006512 6.9e-197 691.0 556 68.5
Psat2g142640 Pisum sativum HOM05D004914 ORTHO05D006512 2.0e-196 689.5 555 67.7
Thecc.03G324700 Theobroma cacao HOM05D004914 ORTHO05D006512 7.6e-196 687.6 550 69.5
Manes.17G007000 Manihot esculenta HOM05D004914 ORTHO05D006512 9.9e-196 687.2 553 68.7
RcHm_v2.0_Chr4g0401521 Rosa chinensis HOM05D004914 ORTHO05D006512 9.9e-196 687.2 557 68.8
Eucgr.E01215 Eucalyptus grandis HOM05D004914 ORTHO05D006512 2.2e-195 686.0 556 68.5
VMungo1215G3133 Vigna mungo HOM05D004914 ORTHO05D006512 2.9e-195 685.6 556 68.3
Rhsim11G0034500 Rhododendron simsii HOM05D004914 ORTHO05D006512 3.8e-195 685.3 558 69.7
Duzib205G0746 Durio zibethinus HOM05D004914 ORTHO05D006512 1.1e-194 683.7 550 68.0
Aqoxy7G00885 Aquilegia oxysepala HOM05D004914 ORTHO05D006512 2.4e-194 682.6 551 68.6
ATR0829G119 Amborella trichopoda HOM05D004914 ORTHO05D006512 4.2e-194 681.8 559 68.2
Ca_25087_v3 Cicer arietinum L. HOM05D004914 ORTHO05D006512 4.2e-194 681.8 558 67.9
RcHm_v2.0_Chr4g0401421 Rosa chinensis HOM05D004914 ORTHO05D006512 5.4e-194 681.4 557 68.0
Sabra03G0071100 Salix brachista HOM05D004914 ORTHO05D006512 5.4e-194 681.4 584 65.8
vmacro00075 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 9.3e-194 680.6 562 68.9
TWI12G0750 Tripterygium wilfordii HOM05D004914 ORTHO05D006512 1.2e-193 680.2 550 68.9
Gohir.A03G179800 Gossypium hirsutum HOM05D004914 ORTHO05D006512 2.1e-193 679.5 550 68.0
Gorai.005G228700 Gossypium raimondii HOM05D004914 ORTHO05D006512 6.0e-193 677.9 550 67.6
Cpa.g.sc90.24 Carica papaya HOM05D004914 ORTHO05D006512 2.3e-192 676.0 552 67.9
arahy.Tifrunner.gnm1.ann1.AE6EEZ Arachis hypogaea HOM05D004914 ORTHO05D006512 3.0e-192 675.6 552 68.5
arahy.Tifrunner.gnm1.ann1.Q0IN0Q Arachis hypogaea HOM05D004914 ORTHO05D006512 3.0e-192 675.6 552 68.5
HPP92_015125 Vanilla planifolia HOM05D004914 ORTHO05D006512 3.9e-192 675.2 558 66.7
PSO717G0130 Papaver somniferum HOM05D004914 ORTHO05D006512 1.1e-191 673.7 556 67.3
Gohir.D02G202952 Gossypium hirsutum HOM05D004914 ORTHO05D006512 1.5e-191 673.3 550 67.1
MELO3C013790.2 Cucumis melo HOM05D004914 ORTHO05D006512 4.3e-191 671.8 557 65.4
BcaB07g30888 Brassica carinata HOM05D004914 ORTHO05D006512 5.6e-191 671.4 552 66.1
CsaV3_3G001000 Cucumis sativus L. HOM05D004914 ORTHO05D006512 5.6e-191 671.4 557 65.4
Actinidia01258 Actinidia chinensis HOM05D004914 ORTHO05D006512 9.6e-191 670.6 556 67.8
BraA09t37776Z Brassica rapa HOM05D004914 ORTHO05D006512 9.6e-191 670.6 552 66.1
A09p21740 Brassica napus HOM05D004914 ORTHO05D006512 1.3e-190 670.2 552 65.9
CARHR176690 Cardamine hirsuta HOM05D004914 ORTHO05D006512 1.3e-190 670.2 552 66.1
BcaC04g21765 Brassica carinata HOM05D004914 ORTHO05D006512 2.1e-190 669.5 552 65.9
BolC9t55648H Brassica oleracea HOM05D004914 ORTHO05D006512 2.1e-190 669.5 552 65.9
Carub.0008s0273 Capsella rubella HOM05D004914 ORTHO05D006512 1.1e-189 667.2 553 65.8
C09p27840 Brassica napus HOM05D004914 ORTHO05D006512 1.8e-189 666.4 552 65.8
Sed0010004 Sechium edule HOM05D004914 ORTHO05D006512 6.9e-189 664.5 557 64.8
Sp2g10330 Schrenkiella parvula HOM05D004914 ORTHO05D006512 2.6e-188 662.5 552 65.0
DCAR_006313 Daucus carota HOM05D004914 ORTHO05D006512 3.4e-188 662.1 549 67.8
SEGI_38788 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.7e-187 659.8 550 66.2
ClCG10G000930 Citrullus lanatus HOM05D004914 ORTHO05D006512 2.9e-187 659.1 551 65.0
Thhalv10000803m.g Eutrema salsugineum HOM05D004914 ORTHO05D006512 6.4e-187 657.9 552 64.1
A02p29100 Brassica napus HOM05D004914 ORTHO05D006512 8.4e-187 657.5 549 65.2
Aa31LG9G7630 Aethionema arabicum HOM05D004914 ORTHO05D006512 1.9e-186 656.4 550 65.5
BraA02t07943Z Brassica rapa HOM05D004914 ORTHO05D006512 2.4e-186 656.0 549 65.0
Os10g0580400 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D006512 3.2e-186 655.6 560 64.5
Migut.A00542 Erythranthe guttata HOM05D004914 ORTHO05D006512 4.2e-186 655.2 556 65.1
SMO134G0146 Selaginella moellendorffii HOM05D004914 ORTHO05D006512 4.2e-186 655.2 549 65.8
SGA_v2.0_scaffold96G29079 Striga asiatica HOM05D004914 ORTHO05D006512 2.1e-185 652.9 542 67.9
AT5G45380 Arabidopsis thaliana HOM05D004914 ORTHO05D006512 6.0e-185 651.4 552 63.9
BcaC03g16746 Brassica carinata HOM05D004914 ORTHO05D006512 7.9e-185 651.0 549 64.8
C02p46180 Brassica napus HOM05D004914 ORTHO05D006512 7.9e-185 651.0 549 64.8
BolC2t10674H Brassica oleracea HOM05D004914 ORTHO05D006512 7.9e-185 651.0 549 64.8
CDE12G0485 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 7.9e-185 651.0 550 64.4
QL12p001913 Quercus lobata HOM05D004914 ORTHO05D006512 2.3e-184 649.4 536 68.3
BcaB07g30458 Brassica carinata HOM05D004914 ORTHO05D006512 5.1e-184 648.3 555 64.5
QL12p001923 Quercus lobata HOM05D004914 ORTHO05D006512 3.3e-183 645.6 542 67.9
CAN.G1731.1 Capsicum annuum HOM05D004914 ORTHO05D006512 5.6e-183 644.8 553 65.6
Nitab4.5_0016045g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 1.3e-182 643.7 497 70.4
AL8G13420 Arabidopsis lyrata HOM05D004914 ORTHO05D006512 1.4e-181 640.2 528 65.9
PGSC0003DMG401007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 2.6e-180 636.0 467 73.2
FAN13G2505 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.6e-177 626.7 572 63.6
Zm00001eb279810 Zea mays HOM05D004914 ORTHO05D006512 1.6e-177 626.7 553 62.6
CSS0001315 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 7.9e-177 624.4 573 62.3
FAN04G0884 Fragaria x ananassa HOM05D004914 ORTHO05D006512 1.5e-175 620.2 573 63.0
EL10Ac5g11909 Beta vulgaris HOM05D004914 ORTHO05D006512 1.2e-172 610.5 544 62.5
Pp3c1_21890 Physcomitrium patens HOM05D004914 ORTHO05D006512 6.5e-171 604.7 557 60.7
Mapoly0022s0194 Marchantia polymorpha HOM05D004914 ORTHO05D006512 2.1e-169 599.7 556 61.0
Mapoly0244s0005 Marchantia polymorpha HOM05D004914 ORTHO05D006512 2.1e-169 599.7 556 61.0
Pp3c14_7160 Physcomitrium patens HOM05D004914 ORTHO05D006512 1.1e-167 594.0 544 61.8
AUR62027313 Chenopodium quinoa HOM05D004914 ORTHO05D006512 3.1e-165 585.9 525 62.3
unitig_92.g28131 Utricularia gibba HOM05D004914 ORTHO05D006512 2.6e-164 582.8 540 62.0
vmacro00050 Vaccinium macrocarpon HOM05D004914 ORTHO05D006512 1.8e-157 560.1 563 59.5
FAN18G4324 Fragaria x ananassa HOM05D004914 ORTHO05D006512 5.9e-156 555.1 421 72.9
Lj8C331T9 Lonicera japonica HOM05D004914 ORTHO05D006512 7.4e-151 538.1 511 61.6
CSS0048600 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 8.0e-145 518.1 379 75.5
SEGI_09515 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 5.7e-143 511.9 389 71.2
SEGI_28013 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 1.7e-142 510.4 389 71.2
AagrBONN_evm.TU.Sc2ySwM_344.881 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.5e-135 487.3 421 65.1
CDE01G0684 Ceratophyllum demersum HOM05D004914 ORTHO05D006512 1.3e-131 474.2 539 51.8
COL.COLO4_37234 Corchorus olitorius HOM05D004914 ORTHO05D006512 1.3e-126 457.6 528 52.5
MCO16G134 Micromonas commoda HOM05D004914 ORTHO05D006512 2.2e-126 456.8 543 47.5
AUR62007419 Chenopodium quinoa HOM05D004914 ORTHO05D006512 5.4e-125 452.2 377 66.0
CBR_g12518 Chara braunii HOM05D004914 ORTHO05D006512 1.0e-115 421.4 487 48.7
Cre08.g360200 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 1.0e-107 394.8 518 43.8
Nitab4.5_0011552g0010 Nicotiana tabacum HOM05D004914 ORTHO05D006512 3.3e-106 389.8 397 59.2
Cre08.g360250 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 3.1e-104 383.3 519 43.7
Cre17.g703800 Chlamydomonas reinhardtii HOM05D004914 ORTHO05D006512 3.4e-103 379.8 520 43.1
CSS0040069 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.4e-88 331.3 368 57.6
Mapoly0006s0303 Marchantia polymorpha HOM05D004914 ORTHO05D006512 1.1e-85 321.6 517 38.3
AagrBONN_evm.TU.Sc2ySwM_117.1801 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.0e-83 315.1 538 37.9
AagrBONN_evm.TU.Sc2ySwM_117.1769 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.5e-82 311.2 536 37.7
AagrBONN_evm.TU.Sc2ySwM_228.2050 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.2e-76 291.6 509 38.1
AagrBONN_evm.TU.Sc2ySwM_228.2053 Anthoceros agrestis HOM05D004914 ORTHO05D006512 1.6e-76 291.2 402 44.0
Mapoly0339s0001 Marchantia polymorpha HOM05D004914 ORTHO05D006512 3.9e-75 286.6 257 61.9
Oeu046798.1 Olea europaea HOM05D004914 ORTHO05D006512 1.1e-69 268.5 228 64.9
SEGI_16876 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 4.7e-44 183.3 211 52.1
CSS0006727 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.4e-43 181.8 146 71.9
SEGI_18257 Sequoiadendron giganteum HOM05D004914 ORTHO05D006512 5.9e-39 166.4 141 63.1
FAN18G1875 Fragaria x ananassa HOM05D004914 ORTHO05D006512 9.7e-34 149.1 122 63.9
CSS0011428 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D006512 1.5e-26 125.2 83 74.7
AagrBONN_evm.TU.Sc2ySwM_117.1738 Anthoceros agrestis HOM05D004914 ORTHO05D038447 8.0e-20 102.8 90 62.2
CSS0022246 Camellia sinensis var. sinensis HOM05D004914 ORTHO05D112219 1.7e-17 95.1 57 80.7
arahy.Tifrunner.gnm1.ann1.N8W4DB Arachis hypogaea HOM05D004914 ORTHO05D000389 4.1e-16 90.5 64 62.5
arahy.Tifrunner.gnm1.ann1.3D8EL1 Arachis hypogaea HOM05D004914 ORTHO05D000389 1.0e-14 85.9 59 66.1
PGSC0003DMG402007615 Solanum tuberosum HOM05D004914 ORTHO05D006512 1.1e-13 82.4 47 80.9
Os02g0689066 Oryza sativa ssp. japonica HOM05D004914 ORTHO05D038447 3.6e-12 77.4 47 72.3
CBR_g12519 Chara braunii HOM05D004914 ORTHO05D006512 4.7e-12 77.0 80 51.2


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