Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015548 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 8.5e-35 149.8 78 100.0
CSS0004539 Camellia sinensis var. sinensis HOM05D009338 ORTHO05D010862 6.3e-30 133.7 78 89.7
Dinv42107 Davidia involucrata HOM05D004625 ORTHO05D006054 1.2e-15 86.3 78 61.5
Gohir.A03G213900 Gossypium hirsutum HOM05D009338 ORTHO05D010862 4.1e-13 77.8 82 54.9
Gohir.D02G235400 Gossypium hirsutum HOM05D009338 ORTHO05D010862 2.0e-12 75.5 82 52.4
Gorai.005G263500 Gossypium raimondii HOM05D009338 ORTHO05D010862 3.9e-11 71.2 82 51.2
Thecc.02G028800 Theobroma cacao HOM05D009338 ORTHO05D010862 3.9e-11 71.2 82 51.2
Potri.009G109200 Populus trichocarpa HOM05D009338 ORTHO05D010862 5.0e-11 70.9 82 51.2
Rhsim11G0170900 Rhododendron simsii HOM05D009338 ORTHO05D010862 6.6e-11 70.5 84 53.6
Gohir.A03G214000 Gossypium hirsutum HOM05D009338 ORTHO05D010862 8.6e-11 70.1 83 51.8
Haze_02460 Corylus avellana HOM05D009338 ORTHO05D010862 1.9e-10 68.9 80 53.8
Potri.004G147966 Populus trichocarpa HOM05D009338 ORTHO05D010862 1.9e-10 68.9 82 50.0
Potri.004G148100 Populus trichocarpa HOM05D009338 ORTHO05D010862 1.9e-10 68.9 82 51.2
Gorai.005G263600 Gossypium raimondii HOM05D009338 ORTHO05D010862 1.6e-09 65.9 83 50.6
QL11p039270 Quercus lobata HOM05D009338 ORTHO05D010862 1.6e-09 65.9 83 54.2
Gohir.D02G235500 Gossypium hirsutum HOM05D009338 ORTHO05D010862 2.1e-09 65.5 83 49.4
TAR628G0903 Trochodendron aralioides HOM05D009338 ORTHO05D010862 2.1e-09 65.5 82 50.0
Cfa004949 Carpinus fangiana HOM05D009338 ORTHO05D010862 2.8e-09 65.1 81 50.6
Thecc.02G028900 Theobroma cacao HOM05D009338 ORTHO05D010862 4.7e-09 64.3 81 51.9
Lalb_Chr01g0002981 Lupinus albus HOM05D016074 ORTHO05D010862 4.0e-08 61.2 78 48.7
Manes.17G096800 Manihot esculenta HOM05D009338 ORTHO05D010862 4.0e-08 61.2 80 48.8
Phvul.011G050200 Phaseolus vulgaris HOM05D016074 ORTHO05D010862 8.9e-08 60.1 81 49.4
Sabra09G0083400 Salix brachista HOM05D009338 ORTHO05D010862 2.6e-07 58.5 82 46.3
Nitab4.5_0001361g0050 Nicotiana tabacum HOM05D013969 ORTHO05D016172 3.4e-07 58.2 88 46.6
Psat7g207480 Pisum sativum HOM05D016074 ORTHO05D010862 7.5e-07 57.0 78 42.3
arahy.Tifrunner.gnm1.ann1.GM2IDW Arachis hypogaea HOM05D016074 ORTHO05D010862 1.7e-06 55.8 78 44.9
COL.COLO4_17778 Corchorus olitorius HOM05D009338 ORTHO05D010862 2.2e-06 55.5 125 36.0
Sabra04G0098100 Salix brachista HOM05D004625 ORTHO05D006054 2.2e-06 55.5 75 49.3
Ca_20821_v3 Cicer arietinum L. HOM05D016074 ORTHO05D010862 3.7e-06 54.7 78 39.7
ECA236G5143 Erigeron canadensis HOM05D044594 ORTHO05D010862 3.7e-06 54.7 83 44.6
Manes.17G096700 Manihot esculenta HOM05D009338 ORTHO05D010862 4.9e-06 54.3 80 46.2
Atru.chr5.2896 Acer truncatum HOM05D009338 ORTHO05D010862 6.4e-06 53.9 87 47.1
Lsat_1_v5_gn_7_88040 Lactuca sativa HOM05D044594 ORTHO05D010862 6.4e-06 53.9 81 44.4
Glyma.07G163400 Glycine max HOM05D041697 ORTHO05D035985 8.3e-06 53.5 75 46.7


User provided reference genes

Program Settings