Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015547 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.1e-110 403.3 206 100.0
CSS0049289 Camellia sinensis var. sinensis HOM05D006333 ORTHO05D007799 1.3e-101 373.2 224 88.4
Rhsim09G0071800 Rhododendron simsii HOM05D006333 ORTHO05D007799 1.1e-86 323.6 224 76.3
Dinv17616 Davidia involucrata HOM05D006333 ORTHO05D007799 3.7e-85 318.5 243 70.8
TWI53G1586 Tripterygium wilfordii HOM05D006333 ORTHO05D007799 9.0e-84 313.9 224 73.2
COL.COLO4_08588 Corchorus olitorius HOM05D006333 ORTHO05D007799 1.2e-83 313.5 224 73.2
Hund24376 Selenicereus undatus HOM05D006333 ORTHO05D007799 2.0e-83 312.8 224 72.3
Hma1.2p1_0044F.1_g026090 Hydrangea macrophylla HOM05D006333 ORTHO05D007799 4.5e-83 311.6 223 71.7
Lj3A849G43 Lonicera japonica HOM05D006333 ORTHO05D007799 4.5e-83 311.6 224 70.5
Duzib132G1109 Durio zibethinus HOM05D006333 ORTHO05D007799 1.7e-82 309.7 221 75.6
CANSAT56G2519 Cannabis sativa HOM05D006333 ORTHO05D007799 2.2e-82 309.3 224 71.4
Thecc.02G159600 Theobroma cacao HOM05D006333 ORTHO05D007799 2.9e-82 308.9 224 73.2
Nn5g28807 Nelumbo nucifera HOM05D006333 ORTHO05D007799 4.9e-82 308.1 218 73.9
Ciclev10032700m.g Citrus clementina HOM05D006333 ORTHO05D007799 6.5e-82 307.8 218 73.4
Gohir.A13G060400 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.1e-81 307.0 220 72.7
Manes.04G057700 Manihot esculenta HOM05D006333 ORTHO05D007799 1.4e-81 306.6 224 71.0
Nitab4.5_0008825g0020 Nicotiana tabacum HOM05D006333 ORTHO05D007799 3.2e-81 305.4 224 71.9
Aqoxy3G04253 Aquilegia oxysepala HOM05D006333 ORTHO05D007799 4.2e-81 305.1 222 72.1
CiPaw.05G169800 Carya illinoinensis HOM05D006333 ORTHO05D007799 5.5e-81 304.7 224 70.5
Sopen02g004090 Solanum pennellii HOM05D006333 ORTHO05D007799 7.1e-81 304.3 222 72.1
PSO782G2700 Papaver somniferum HOM05D006333 ORTHO05D007799 9.3e-81 303.9 218 72.5
CAN.G1011.5 Capsicum annuum HOM05D006333 ORTHO05D007799 1.6e-80 303.1 220 72.7
Solyc02g014720.4 Solanum lycopersicum HOM05D006333 ORTHO05D007799 1.6e-80 303.1 224 71.4
MELO3C024016.2 Cucumis melo HOM05D006333 ORTHO05D007799 2.7e-80 302.4 224 71.9
RcHm_v2.0_Chr4g0446761 Rosa chinensis HOM05D006333 ORTHO05D007799 3.5e-80 302.0 221 71.5
GSVIVG01012055001 Vitis vinifera HOM05D006333 ORTHO05D007799 4.6e-80 301.6 207 75.8
CsaV3_3G031750 Cucumis sativus L. HOM05D006333 ORTHO05D007799 6.0e-80 301.2 224 71.9
Prupe.1G347700 Prunus persica HOM05D006333 ORTHO05D007799 7.9e-80 300.8 224 71.4
MSTRG.11948 Avicennia marina HOM05D006333 ORTHO05D007799 1.3e-79 300.1 224 71.0
FvH4_4g36970 Fragaria vesca HOM05D006333 ORTHO05D007799 1.3e-79 300.1 221 71.5
HanXRQChr12g0366301 Helianthus annuus HOM05D006333 ORTHO05D007799 1.3e-79 300.1 224 70.1
Gohir.D13G061500 Gossypium hirsutum HOM05D006333 ORTHO05D007799 1.8e-79 299.7 220 71.4
Sed0022709 Sechium edule HOM05D006333 ORTHO05D007799 3.0e-79 298.9 224 70.1
Gorai.013G070000 Gossypium raimondii HOM05D006333 ORTHO05D007799 8.7e-79 297.4 226 70.4
Sc17g0000100 Simmondsia chinensis HOM05D006333 ORTHO05D007799 8.7e-79 297.4 224 68.8
Aa31LG7G2140 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.1e-78 297.0 224 69.6
FAN07G1904 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.5e-78 296.6 221 70.1
Thhalv10008690m.g Eutrema salsugineum HOM05D006333 ORTHO05D007799 2.5e-78 295.8 222 69.4
Nitab4.5_0003092g0070 Nicotiana tabacum HOM05D006333 ORTHO05D007799 2.5e-78 295.8 207 74.9
PGR044G2499 Punica granatum HOM05D006333 ORTHO05D007799 4.3e-78 295.0 216 72.7
Medtr4g023480 Medicago truncatula HOM05D006333 ORTHO05D007799 7.4e-78 294.3 224 68.3
Lj3g0001632 Lotus japonicus HOM05D006333 ORTHO05D007799 1.6e-77 293.1 215 69.3
CARHR017920 Cardamine hirsuta HOM05D006333 ORTHO05D007799 2.8e-77 292.4 219 69.9
Psat7g233400 Pisum sativum HOM05D006333 ORTHO05D007799 3.7e-77 292.0 221 68.8
THA.LOC104808350 Tarenaya hassleriana HOM05D006333 ORTHO05D007799 3.7e-77 292.0 219 69.4
Lsat_1_v5_gn_8_33120 Lactuca sativa HOM05D006333 ORTHO05D007799 4.8e-77 291.6 228 69.3
AT1G17330 Arabidopsis thaliana HOM05D006333 ORTHO05D007799 6.3e-77 291.2 217 69.1
EL10Ac9g22952 Beta vulgaris HOM05D006333 ORTHO05D007799 1.1e-76 290.4 222 67.6
AL1G29580 Arabidopsis lyrata HOM05D006333 ORTHO05D007799 1.8e-76 289.7 217 68.7
Potri.007G072000 Populus trichocarpa HOM05D006333 ORTHO05D007799 1.8e-76 289.7 219 71.2
Eucgr.J00869 Eucalyptus grandis HOM05D006333 ORTHO05D007799 2.4e-76 289.3 223 68.6
MBI06_g42293_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 3.1e-76 288.9 222 69.4
ECA233G4371 Erigeron canadensis HOM05D006333 ORTHO05D007799 4.1e-76 288.5 227 68.3
Prupe.1G347900 Prunus persica HOM05D006333 ORTHO05D007799 5.3e-76 288.1 224 68.8
MD13G1004800 Malus domestica HOM05D006333 ORTHO05D007799 9.0e-76 287.3 218 70.6
Glyma.12G026000 Glycine max HOM05D006333 ORTHO05D007799 1.2e-75 287.0 214 69.2
Atru.chr11.1164 Acer truncatum HOM05D006333 ORTHO05D007799 3.4e-75 285.4 220 67.3
Phvul.011G028900 Phaseolus vulgaris HOM05D006333 ORTHO05D007799 3.4e-75 285.4 222 67.1
Ca_19901_v3 Cicer arietinum L. HOM05D006333 ORTHO05D007799 4.5e-75 285.0 214 68.7
Migut.A00709 Erythranthe guttata HOM05D006333 ORTHO05D007799 7.6e-75 284.3 224 67.4
Cfa008751 Carpinus fangiana HOM05D006333 ORTHO05D007799 1.0e-74 283.9 224 67.9
FAN17G3063 Fragaria x ananassa HOM05D006333 ORTHO05D007799 1.3e-74 283.5 245 63.7
BcaC05g25649 Brassica carinata HOM05D006333 ORTHO05D007799 6.5e-74 281.2 217 68.7
BolC5t30276H Brassica oleracea HOM05D006333 ORTHO05D007799 6.5e-74 281.2 217 68.7
unitig_32.g11605 Utricularia gibba HOM05D006333 ORTHO05D007799 8.5e-74 280.8 224 63.8
Sp1g15450 Schrenkiella parvula HOM05D006333 ORTHO05D007799 1.4e-73 280.0 217 68.2
C05p15710 Brassica napus HOM05D006333 ORTHO05D007799 1.9e-73 279.6 217 68.2
VMungo1127G0165 Vigna mungo HOM05D006333 ORTHO05D007799 3.2e-73 278.9 214 68.2
A06p13260 Brassica napus HOM05D006333 ORTHO05D007799 1.6e-72 276.6 224 66.5
arahy.Tifrunner.gnm1.ann1.A0JP3J Arachis hypogaea HOM05D006333 ORTHO05D007799 1.0e-71 273.9 229 64.2
BraA06t24479Z Brassica rapa HOM05D006333 ORTHO05D007799 1.0e-71 273.9 217 67.3
Carub.0001s1708 Capsella rubella HOM05D006333 ORTHO05D007799 1.0e-71 273.9 218 67.0
Peaxi162Scf00334g00421 Petunia axillaris HOM05D006333 ORTHO05D007799 1.0e-71 273.9 200 74.0
ATR0618G379 Amborella trichopoda HOM05D006333 ORTHO05D007799 3.9e-71 271.9 221 65.2
arahy.Tifrunner.gnm1.ann1.N7V6FU Arachis hypogaea HOM05D006333 ORTHO05D007799 5.7e-70 268.1 245 60.0
Cc11_g02420 Coffea canephora HOM05D006333 ORTHO05D007799 2.2e-69 266.2 222 67.1
FAN12G1853 Fragaria x ananassa HOM05D006333 ORTHO05D007799 2.2e-69 266.2 222 65.8
BcaB07g34033 Brassica carinata HOM05D006333 ORTHO05D007799 4.8e-69 265.0 221 64.7
Os10g0486000 Oryza sativa ssp. japonica HOM05D006333 ORTHO05D007799 1.1e-68 263.8 220 61.8
PSO063G3232 Papaver somniferum HOM05D006333 ORTHO05D007799 4.1e-68 261.9 246 60.6
ClCG10G012010 Citrullus lanatus HOM05D006333 ORTHO05D007799 6.9e-68 261.2 200 72.0
AUR62017701 Chenopodium quinoa HOM05D006333 ORTHO05D007799 9.1e-68 260.8 199 66.8
Actinidia11766 Actinidia chinensis HOM05D006333 ORTHO05D007799 1.2e-67 260.4 223 64.6
Eucgr.J00870 Eucalyptus grandis HOM05D006333 ORTHO05D007799 1.0e-66 257.3 204 66.7
Sabra07G0060700 Salix brachista HOM05D006333 ORTHO05D007799 1.0e-66 257.3 256 58.6
DCAR_008496 Daucus carota HOM05D003141 ORTHO05D003633 1.3e-66 256.9 195 71.3
Atru.chr11.2675 Acer truncatum HOM05D006333 ORTHO05D007799 1.7e-66 256.5 215 61.9
SGA_v2.0_scaffold146G36264 Striga asiatica HOM05D006333 ORTHO05D007799 2.2e-66 256.1 260 57.7
TPR.G9857 Trifolium pratense HOM05D006333 ORTHO05D007799 2.9e-66 255.8 193 66.8
Atru.chr11.2676 Acer truncatum HOM05D006333 ORTHO05D007799 6.5e-66 254.6 215 61.9
AUR62032988 Chenopodium quinoa HOM05D006333 ORTHO05D007799 4.2e-65 251.9 189 68.3
CDE02G3779 Ceratophyllum demersum HOM05D006333 ORTHO05D007799 1.0e-63 247.3 190 70.5
HPP92_008575 Vanilla planifolia HOM05D006333 ORTHO05D007799 9.7e-62 240.7 221 59.7
Lalb_Chr01g0001411 Lupinus albus HOM05D006333 ORTHO05D007799 1.7e-61 240.0 217 58.5
Ah.01g001500 Amaranthus hybridus HOM05D006333 ORTHO05D007799 1.8e-60 236.5 178 69.1
SMO116G0442 Selaginella moellendorffii HOM05D006333 ORTHO05D007799 3.6e-56 222.2 217 56.7
SalBow7G0482 Salvia bowleyana HOM05D006333 ORTHO05D007799 7.4e-54 214.5 262 51.1
Cpa.g.sc0.135 Carica papaya HOM05D006333 ORTHO05D007799 1.7e-53 213.4 146 73.3
Pp3c7_23360 Physcomitrium patens HOM05D006333 ORTHO05D007799 4.1e-52 208.8 221 52.0
TAR629G0175 Trochodendron aralioides HOM05D006333 ORTHO05D007799 5.9e-51 204.9 175 65.1
vmacro16037 Vaccinium macrocarpon HOM05D006333 ORTHO05D007799 1.7e-50 203.4 120 83.3
SGA_v2.0_scaffold173G39125 Striga asiatica HOM05D006333 ORTHO05D007799 2.2e-50 203.0 131 74.8
Haze_11767 Corylus avellana HOM05D006333 ORTHO05D007799 3.6e-48 195.7 190 60.5
Zm00001eb045350 Zea mays HOM05D006333 ORTHO05D007799 4.7e-48 195.3 133 69.2
Cre05.g234647 Chlamydomonas reinhardtii HOM05D006333 ORTHO05D007799 5.2e-47 191.8 227 49.8
MCO07G572 Micromonas commoda HOM05D006333 ORTHO05D007799 1.7e-42 176.8 221 48.4
Actinidia13050 Actinidia chinensis HOM05D006333 ORTHO05D007799 5.0e-42 175.3 200 53.5
Mapoly0006s0058 Marchantia polymorpha HOM05D006333 ORTHO05D007799 7.0e-36 154.8 129 58.1
PRCOL_00000482 Prasinoderma coloniale HOM05D006333 ORTHO05D007799 1.2e-35 154.1 220 42.3
QL03p044200 Quercus lobata HOM05D006333 ORTHO05D007799 2.7e-35 152.9 85 85.9
SalBow1G5083 Salvia bowleyana HOM05D006333 ORTHO05D007799 2.5e-33 146.4 104 71.2
CBR_g5629 Chara braunii HOM05D006333 ORTHO05D007799 1.2e-32 144.1 384 31.5
Ah.05g173900 Amaranthus hybridus HOM05D006333 ORTHO05D007799 2.3e-26 123.2 84 67.9
Aa31sc968G10 Aethionema arabicum HOM05D006333 ORTHO05D007799 6.4e-21 105.1 136 48.5
Thecc.08G107200 Theobroma cacao HOM05D006333 ORTHO05D007799 4.6e-19 99.0 70 68.6
Haze_06289 Corylus avellana HOM05D006333 ORTHO05D007799 1.7e-18 97.1 51 92.2
Cpa.g.sc0.136 Carica papaya HOM05D006333 ORTHO05D007799 3.0e-18 96.3 66 77.3
Oeu044913.1 Olea europaea HOM05D006333 ORTHO05D007799 3.0e-18 96.3 66 78.8
Haze_18642 Corylus avellana HOM05D006333 ORTHO05D007799 1.1e-17 94.4 71 70.4
SalBow1G0042 Salvia bowleyana HOM05D006333 ORTHO05D007799 1.6e-16 90.5 67 70.1
TAR629G1621 Trochodendron aralioides HOM05D006333 ORTHO05D007799 6.8e-15 85.1 56 80.4
Cfa023716 Carpinus fangiana HOM05D006333 ORTHO05D007799 7.8e-11 71.6 98 41.8
MBI06_g42292_MAGBIO Magnolia biondii HOM05D006333 ORTHO05D007799 7.8e-11 71.6 53 69.8
Cfa024705 Carpinus fangiana HOM05D006333 ORTHO05D007799 2.3e-10 70.1 192 29.2
QL03p044193 Quercus lobata HOM05D006333 ORTHO05D007799 1.2e-08 64.3 70 52.9
Aa31LG4G11880 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.1e-07 61.2 57 57.9
Aa31sc286G50 Aethionema arabicum HOM05D006333 ORTHO05D007799 1.5e-06 57.4 45 64.4


User provided reference genes

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