Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015539 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 1.1e-204 716.5 384 100.0
CSS0013222 Camellia sinensis var. sinensis HOM05D007038 ORTHO05D008893 8.6e-189 663.7 385 94.8
Actinidia23561 Actinidia chinensis HOM05D007038 ORTHO05D008893 5.7e-140 501.5 388 69.6
Dinv42838 Davidia involucrata HOM05D007038 ORTHO05D008893 1.7e-139 500.0 386 70.2
Dinv43261 Davidia involucrata HOM05D007038 ORTHO05D008893 5.1e-133 478.4 368 70.4
CiPaw.16G107900 Carya illinoinensis HOM05D007038 ORTHO05D008893 6.5e-128 461.5 380 66.3
QL02p093776 Quercus lobata HOM05D007038 ORTHO05D008893 1.9e-127 459.9 390 64.6
Cfa020806 Carpinus fangiana HOM05D007038 ORTHO05D008893 4.2e-127 458.8 387 65.1
Rhsim03G0258100 Rhododendron simsii HOM05D007038 ORTHO05D008893 1.0e-125 454.1 421 62.2
Manes.06G033300 Manihot esculenta HOM05D007038 ORTHO05D008893 1.4e-125 453.8 380 64.2
GSVIVG01023636001 Vitis vinifera HOM05D007038 ORTHO05D008893 5.7e-124 448.4 377 63.1
Lj9A719G52 Lonicera japonica HOM05D007038 ORTHO05D008893 1.3e-123 447.2 386 64.8
RcHm_v2.0_Chr2g0085451 Rosa chinensis HOM05D007038 ORTHO05D008893 1.6e-121 440.3 386 61.9
Atru.chr7.996 Acer truncatum HOM05D007038 ORTHO05D008893 1.0e-120 437.6 371 63.9
TWI63G0746 Tripterygium wilfordii HOM05D007038 ORTHO05D008893 1.7e-120 436.8 387 60.7
FvH4_1g00730 Fragaria vesca HOM05D007038 ORTHO05D008893 2.2e-120 436.4 372 62.9
Sopen07g001900 Solanum pennellii HOM05D007038 ORTHO05D008893 4.2e-119 432.2 399 61.2
MD15G1150700 Malus domestica HOM05D007038 ORTHO05D008893 5.5e-119 431.8 388 61.6
Gohir.A13G206700 Gossypium hirsutum HOM05D007038 ORTHO05D008893 1.0e-117 427.6 389 60.2
Gorai.013G241400 Gossypium raimondii HOM05D007038 ORTHO05D008893 5.2e-117 425.2 389 59.4
FAN28G0561 Fragaria x ananassa HOM05D007038 ORTHO05D008893 8.8e-117 424.5 393 59.5
TAR626G0465 Trochodendron aralioides HOM05D007038 ORTHO05D008893 3.4e-116 422.5 378 61.4
Prupe.7G265000 Prunus persica HOM05D007038 ORTHO05D008893 9.8e-116 421.0 386 60.6
FAN23G2273 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.4e-114 417.2 395 58.5
PGSC0003DMG400011195 Solanum tuberosum HOM05D007038 ORTHO05D008893 1.8e-114 416.8 418 57.4
FAN23G1724 Fragaria x ananassa HOM05D007038 ORTHO05D008893 1.3e-112 410.6 398 57.5
Sc14g0000940 Simmondsia chinensis HOM05D007038 ORTHO05D008893 2.2e-112 409.8 387 58.1
Lj4g0021787 Lotus japonicus HOM05D007038 ORTHO05D008893 5.0e-112 408.7 385 59.5
VMungo1215G2991 Vigna mungo HOM05D007038 ORTHO05D008893 7.2e-111 404.8 386 58.0
arahy.Tifrunner.gnm1.ann1.ULM9BE Arachis hypogaea HOM05D007038 ORTHO05D008893 1.0e-109 401.0 365 60.3
TPR.G24832 Trifolium pratense HOM05D007038 ORTHO05D008893 1.4e-109 400.6 387 56.6
Glyma.02G205400 Glycine max HOM05D007038 ORTHO05D008893 8.8e-109 397.9 385 56.9
arahy.Tifrunner.gnm1.ann1.2821YK Arachis hypogaea HOM05D007038 ORTHO05D008893 2.0e-108 396.7 376 58.5
Medtr4g130580 Medicago truncatula HOM05D007038 ORTHO05D008893 2.0e-108 396.7 375 56.8
ECA234G0501 Erigeron canadensis HOM05D007038 ORTHO05D008893 3.4e-108 396.0 381 59.3
CANSAT11G2324 Cannabis sativa HOM05D007038 ORTHO05D008893 5.7e-108 395.2 369 60.7
Glyma.17G072600 Glycine max HOM05D007038 ORTHO05D008893 5.7e-108 395.2 387 57.4
Nn8g39966 Nelumbo nucifera HOM05D007038 ORTHO05D008893 8.3e-107 391.3 371 59.6
Lalb_Chr13g0300771 Lupinus albus HOM05D007038 ORTHO05D008893 2.7e-105 386.3 377 57.8
PGR102G3121 Punica granatum HOM05D007038 ORTHO05D008893 2.3e-104 383.3 388 56.2
Migut.J01371 Erythranthe guttata HOM05D007038 ORTHO05D008893 2.9e-104 382.9 334 61.4
Psat0s3930g0120 Pisum sativum HOM05D007038 ORTHO05D008893 4.3e-103 379.0 361 57.6
Sed0007561 Sechium edule HOM05D007038 ORTHO05D008893 8.0e-102 374.8 369 55.8
Cpa.g.sc46.174 Carica papaya HOM05D007038 ORTHO05D008893 3.0e-101 372.9 386 54.4
Sabra06G0139000 Salix brachista HOM05D007038 ORTHO05D008893 2.0e-100 370.2 481 47.2
vmacro06062 Vaccinium macrocarpon HOM05D007038 ORTHO05D008893 1.7e-99 367.1 359 63.8
C02p13780 Brassica napus HOM05D007038 ORTHO05D008893 2.9e-99 366.3 382 50.5
BolC2t07497H Brassica oleracea HOM05D007038 ORTHO05D008893 2.9e-99 366.3 382 50.5
Haze_19163 Corylus avellana HOM05D007038 ORTHO05D008893 7.0e-98 361.7 334 60.5
Lsat_1_v5_gn_5_89520 Lactuca sativa HOM05D007038 ORTHO05D008893 2.0e-97 360.1 387 54.3
Cc06_g14750 Coffea canephora HOM05D007038 ORTHO05D008893 3.5e-97 359.4 325 56.9
EL10Ac8g18937 Beta vulgaris HOM05D007038 ORTHO05D008893 1.3e-96 357.5 376 52.9
Eucgr.C02504 Eucalyptus grandis HOM05D007038 ORTHO05D008893 1.7e-96 357.1 374 54.0
PSO063G4531 Papaver somniferum HOM05D007038 ORTHO05D008893 3.9e-96 355.9 373 55.0
DCAR_019405 Daucus carota HOM05D007038 ORTHO05D008893 6.6e-96 355.1 315 60.3
Thhalv10015603m.g Eutrema salsugineum HOM05D007038 ORTHO05D008893 2.5e-95 353.2 384 49.0
HanXRQChr16g0520471 Helianthus annuus HOM05D007038 ORTHO05D008893 4.7e-94 349.0 447 48.8
Aqoxy7G03364 Aquilegia oxysepala HOM05D007038 ORTHO05D008893 6.2e-94 348.6 357 56.3
THA.LOC104811831 Tarenaya hassleriana HOM05D007038 ORTHO05D008893 8.0e-94 348.2 380 50.5
CARHR271660 Cardamine hirsuta HOM05D007038 ORTHO05D008893 1.4e-93 347.4 393 49.1
Duzib150G1077 Durio zibethinus HOM05D007038 ORTHO05D008893 1.8e-93 347.1 372 52.4
Hund08926 Selenicereus undatus HOM05D007038 ORTHO05D008893 1.8e-93 347.1 395 52.2
AL8G33930 Arabidopsis lyrata HOM05D007038 ORTHO05D008893 2.3e-93 346.7 378 49.5
SalBow1G2783 Salvia bowleyana HOM05D007038 ORTHO05D008893 1.5e-92 344.0 394 54.6
Nitab4.5_0002724g0040 Nicotiana tabacum HOM05D007038 ORTHO05D008893 2.6e-92 343.2 456 48.0
ClCG02G014390 Citrullus lanatus HOM05D007038 ORTHO05D008893 4.4e-92 342.4 398 51.0
FAN26G1014 Fragaria x ananassa HOM05D007038 ORTHO05D008893 5.8e-92 342.0 371 53.9
Carub.0008s1841 Capsella rubella HOM05D007038 ORTHO05D008893 2.9e-91 339.7 371 49.1
AT5G57880 Arabidopsis thaliana HOM05D007038 ORTHO05D008893 3.7e-91 339.3 384 49.0
BcaC04g19921 Brassica carinata HOM05D007038 ORTHO05D008893 5.4e-90 335.5 424 44.3
Phvul.003G155000 Phaseolus vulgaris HOM05D007038 ORTHO05D008893 4.6e-89 332.4 325 56.9
A10p15240 Brassica napus HOM05D007038 ORTHO05D008893 1.3e-88 330.9 408 45.1
Thecc.09G151200 Theobroma cacao HOM05D007038 ORTHO05D008893 2.3e-88 330.1 296 58.4
HanXRQChr16g0520451 Helianthus annuus HOM05D007038 ORTHO05D008893 1.6e-86 323.9 349 53.6
SGA_v2.0_scaffold265G46092 Striga asiatica HOM05D007038 ORTHO05D008893 1.6e-86 323.9 392 50.3
A02p08130 Brassica napus HOM05D007038 ORTHO05D008893 1.8e-85 320.5 382 45.3
BraA02t05887Z Brassica rapa HOM05D007038 ORTHO05D008893 2.3e-85 320.1 381 46.5
BcaB05g22382 Brassica carinata HOM05D007038 ORTHO05D008893 5.2e-85 318.9 401 45.9
BraA10t43606Z Brassica rapa HOM05D007038 ORTHO05D008893 2.6e-84 316.6 405 44.2
C09p49760 Brassica napus HOM05D007038 ORTHO05D008893 7.5e-84 315.1 394 45.2
Aa31LG3G13710 Aethionema arabicum HOM05D007038 ORTHO05D008893 9.8e-84 314.7 382 46.3
Ciclev10009099m.g Citrus clementina HOM05D007038 ORTHO05D008893 4.1e-82 309.3 298 58.1
BolC9t57827H Brassica oleracea HOM05D007038 ORTHO05D008893 2.1e-78 297.0 446 40.8
MBI14_g09472_MAGBIO Magnolia biondii HOM05D007038 ORTHO05D008893 2.1e-78 297.0 322 52.8
Ca_21139_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.4e-77 294.3 311 53.1
Ca_21144_v3 Cicer arietinum L. HOM05D007038 ORTHO05D008893 1.4e-77 294.3 311 53.1
Os08g0555800 Oryza sativa ssp. japonica HOM05D007038 ORTHO05D008893 8.9e-77 291.6 369 45.5
ATR0019G005 Amborella trichopoda HOM05D007038 ORTHO05D008893 1.3e-75 287.7 389 45.0
Nitab4.5_0002320g0050 Nicotiana tabacum HOM05D001418 ORTHO05D002038 1.5e-71 274.2 419 46.3
Zm00001eb180360 Zea mays HOM05D007038 ORTHO05D008893 5.2e-69 265.8 375 44.3
Solyc07g005790.4 Solanum lycopersicum HOM05D007038 ORTHO05D008893 2.1e-65 253.8 181 67.4
Gohir.D13G211300 Gossypium hirsutum HOM05D007038 ORTHO05D008893 8.7e-64 248.4 305 49.2
AUR62025344 Chenopodium quinoa HOM05D007038 ORTHO05D008893 3.3e-63 246.5 384 41.7
AUR62028347 Chenopodium quinoa HOM05D007038 ORTHO05D008893 6.2e-62 242.3 377 41.4
Potri.006G182301 Populus trichocarpa HOM05D007038 ORTHO05D008893 1.1e-61 241.5 173 68.8
CAN.G160.33 Capsicum annuum HOM05D007038 ORTHO05D008893 5.4e-58 229.2 164 67.1
unitig_46.g18476 Utricularia gibba HOM05D007038 ORTHO05D008893 1.3e-54 218.0 255 49.4
Peaxi162Scf00401g00327 Petunia axillaris HOM05D007038 ORTHO05D008893 3.6e-54 216.5 148 71.6
CsaV3_2G007610 Cucumis sativus L. HOM05D007038 ORTHO05D008893 1.6e-41 174.5 319 39.8
Solyc07g005800.2 Solanum lycopersicum HOM05D007038 ORTHO05D008893 8.7e-40 168.7 170 56.5
Peaxi162Scf00401g00326 Petunia axillaris HOM05D007038 ORTHO05D008893 7.4e-39 165.6 183 59.0
Potri.006G182201 Populus trichocarpa HOM05D007038 ORTHO05D008893 2.3e-32 144.1 124 62.1
Hma1.2p1_0222F.1_g093710 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 5.3e-29 132.9 91 73.6
Hma1.2p1_0222F.1_g093742 Hydrangea macrophylla HOM05D007038 ORTHO05D008893 5.3e-29 132.9 91 73.6
SHI02845 Sapria himalayana HOM05D007038 ORTHO05D008893 8.5e-19 99.0 163 41.7
CDE02G0638 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.2e-17 95.1 166 39.8
PSO782G2459 Papaver somniferum HOM05D007038 ORTHO05D008893 1.2e-17 95.1 111 50.5
CDE05G1617 Ceratophyllum demersum HOM05D007038 ORTHO05D008893 1.4e-16 91.7 170 36.5
Pp3c7_6690 Physcomitrium patens HOM05D007038 ORTHO05D008893 5.2e-16 89.7 295 26.1
Ah.14g084570 Amaranthus hybridus HOM05D007038 ORTHO05D008893 6.1e-09 66.2 59 55.9
Mapoly0056s0109 Marchantia polymorpha HOM05D007038 ORTHO05D008893 3.0e-08 63.9 184 25.5
HPP92_020432 Vanilla planifolia HOM05D000367 ORTHO05D008893 2.6e-07 60.8 96 43.8


User provided reference genes

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