Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015528 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.7e-33 144.4 80 100.0
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 5.1e-27 124.0 77 89.6
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 1.1e-26 122.9 79 91.1
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.1e-24 114.8 84 79.8
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 1.4e-19 99.4 76 76.3
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 2.6e-18 95.1 75 72.0
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 7.4e-18 93.6 75 69.3
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 6.3e-17 90.5 73 67.1
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 8.2e-17 90.1 79 67.1
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 1.4e-16 89.4 76 69.7
CDE04G0131 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 2.4e-16 88.6 74 64.9
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 7.0e-16 87.0 76 68.4
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 9.1e-16 86.7 79 63.3
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 1.2e-15 86.3 75 62.7
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 1.2e-15 86.3 76 63.2
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 2.0e-15 85.5 76 63.2
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 3.5e-15 84.7 75 65.3
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 3.5e-15 84.7 76 63.2
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 4.5e-15 84.3 77 63.6
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 4.5e-15 84.3 73 65.8
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 4.5e-15 84.3 73 64.4
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 5.9e-15 84.0 76 63.2
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 5.9e-15 84.0 70 67.1
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 7.7e-15 83.6 70 60.0
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 7.7e-15 83.6 75 61.3
TAR622G0830 Trochodendron aralioides HOM05D005252 ORTHO05D006788 7.7e-15 83.6 75 61.3
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 1.0e-14 83.2 77 63.6
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 1.0e-14 83.2 79 54.4
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 1.0e-14 83.2 69 58.0
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 2.2e-14 82.0 73 65.8
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 2.2e-14 82.0 73 61.6
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 2.2e-14 82.0 73 61.6
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 2.2e-14 82.0 76 61.8
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 2.9e-14 81.6 78 60.3
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 2.9e-14 81.6 83 57.8
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 6.5e-14 80.5 73 60.3
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 8.5e-14 80.1 70 64.3
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 8.5e-14 80.1 76 60.5
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 1.1e-13 79.7 75 60.0
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 1.1e-13 79.7 75 60.0
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 1.1e-13 79.7 74 58.1
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 1.5e-13 79.3 75 60.0
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 1.5e-13 79.3 85 57.6
ATR0807G108 Amborella trichopoda HOM05D005252 ORTHO05D006788 1.9e-13 79.0 74 58.1
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 1.9e-13 79.0 75 64.0
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 2.5e-13 78.6 75 60.0
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 3.2e-13 78.2 75 61.3
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 3.2e-13 78.2 75 61.3
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 4.2e-13 77.8 75 58.7
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 4.2e-13 77.8 74 55.4
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 5.5e-13 77.4 77 59.7
MELO3C020240.2 Cucumis melo HOM05D005252 ORTHO05D006788 7.2e-13 77.0 74 62.2
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 7.2e-13 77.0 76 55.3
DCAR_003402 Daucus carota HOM05D005252 ORTHO05D006788 9.4e-13 76.6 77 58.4
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 9.4e-13 76.6 77 58.4
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 9.4e-13 76.6 73 56.2
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 9.4e-13 76.6 76 60.5
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 9.4e-13 76.6 79 58.2
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 1.2e-12 76.3 75 57.3
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 1.2e-12 76.3 75 56.0
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 1.2e-12 76.3 75 56.0
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.6e-12 75.9 75 57.3
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 1.6e-12 75.9 75 57.3
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 2.1e-12 75.5 70 57.1
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 2.1e-12 75.5 79 54.4
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 2.1e-12 75.5 79 57.0
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 2.7e-12 75.1 75 54.7
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 2.7e-12 75.1 75 52.0
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 2.7e-12 75.1 75 53.3
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 2.7e-12 75.1 75 57.3
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 2.7e-12 75.1 66 60.6
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 2.7e-12 75.1 79 57.0
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 3.6e-12 74.7 79 57.0
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 3.6e-12 74.7 79 57.0
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 4.7e-12 74.3 75 52.0
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 8.0e-12 73.6 75 52.0
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 8.0e-12 73.6 75 52.0
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 1.0e-11 73.2 69 59.4
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 1.0e-11 73.2 69 56.5
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 1.4e-11 72.8 74 58.1
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 1.4e-11 72.8 75 57.3
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 2.3e-11 72.0 73 56.2
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 3.0e-11 71.6 71 56.3
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 4.0e-11 71.2 73 54.8
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 4.0e-11 71.2 79 60.8
SEGI_29343 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 5.2e-11 70.9 68 54.4
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 5.2e-11 70.9 75 52.0
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 6.7e-11 70.5 77 51.9
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 6.7e-11 70.5 82 47.6
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 2.6e-10 68.6 76 57.9
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 2.6e-10 68.6 80 53.8
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 9.7e-10 66.6 77 55.8
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 9.7e-10 66.6 75 53.3
Mapoly0060s0113 Marchantia polymorpha HOM05D005252 ORTHO05D006788 2.8e-09 65.1 68 54.4
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 8.2e-09 63.5 69 53.6
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 2.0e-07 58.9 76 51.3
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.5e-07 58.2 76 51.3
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 3.5e-07 58.2 76 51.3
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 7.7e-07 57.0 77 49.4
AagrBONN_evm.TU.Sc2ySwM_344.1682 Anthoceros agrestis HOM05D005252 ORTHO05D006788 1.3e-06 56.2 72 50.0


User provided reference genes

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