Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015496 Camellia sinensis var. sinensis HOM05D009685 ORTHO05D011416 2.1e-55 219.2 141 100.0
Actinidia34283 Actinidia chinensis HOM05D009685 ORTHO05D011416 2.6e-21 105.9 141 62.4
Rhsim03G0217800 Rhododendron simsii HOM05D009685 ORTHO05D011416 4.1e-19 98.6 145 49.7
Dinv17283 Davidia involucrata HOM05D009685 ORTHO05D011416 6.9e-19 97.8 144 53.5
Hma1.2p1_0115F.1_g055670 Hydrangea macrophylla HOM05D009685 ORTHO05D011416 6.5e-17 91.3 143 58.7
Actinidia08712 Actinidia chinensis HOM05D009685 ORTHO05D011416 3.2e-16 89.0 141 60.3
CSS0013051 Camellia sinensis var. sinensis HOM05D009685 ORTHO05D011416 3.0e-14 82.4 155 54.2
Peaxi162Scf00815g00118 Petunia axillaris HOM05D009685 ORTHO05D011416 3.3e-13 79.0 77 61.0
Rhsim09G0210800 Rhododendron simsii HOM05D009685 ORTHO05D011416 4.1e-11 72.0 82 58.5
Nitab4.5_0000021g0140 Nicotiana tabacum HOM05D009685 ORTHO05D011416 1.2e-10 70.5 83 55.4
Nitab4.5_0000115g0110 Nicotiana tabacum HOM05D009685 ORTHO05D011416 2.6e-10 69.3 72 56.9
Nitab4.5_0003561g0040 Nicotiana tabacum HOM05D009685 ORTHO05D011416 7.7e-10 67.8 75 54.7
Dinv29196 Davidia involucrata HOM05D009685 ORTHO05D011416 1.3e-09 67.0 143 43.4
Ah.13g070970 Amaranthus hybridus HOM05D034858 ORTHO05D011416 5.0e-09 65.1 169 49.1
QL09p006131 Quercus lobata HOM05D024871 ORTHO05D011416 1.5e-08 63.5 84 48.8
Ah.04g156970 Amaranthus hybridus HOM05D034858 ORTHO05D011416 1.6e-07 60.1 156 46.2
CiPaw.06G038800 Carya illinoinensis HOM05D024871 ORTHO05D028658 1.6e-07 60.1 141 35.5
Nitab4.5_0004582g0050 Nicotiana tabacum HOM05D009685 ORTHO05D011416 2.1e-07 59.7 137 38.7
PGSC0003DMG400026925 Solanum tuberosum HOM05D009685 ORTHO05D011416 2.1e-07 59.7 79 50.6
Actinidia18689 Actinidia chinensis HOM05D009685 ORTHO05D011416 2.7e-07 59.3 55 65.5
Sc19g0000420 Simmondsia chinensis HOM05D009685 ORTHO05D011416 6.1e-07 58.2 69 56.5
Hund09749 Selenicereus undatus HOM05D049530 ORTHO05D380591 1.4e-06 57.0 79 48.1
PSO782G2317 Papaver somniferum HOM05D037316 ORTHO05D302878 1.8e-06 56.6 157 36.9
Sopen06g029360 Solanum pennellii HOM05D009685 ORTHO05D011416 1.8e-06 56.6 79 51.9
PSO063G1104 Papaver somniferum HOM05D037316 ORTHO05D305673 4.0e-06 55.5 157 36.3
Cfa016135 Carpinus fangiana HOM05D024871 ORTHO05D028658 6.7e-06 54.7 143 37.8
Hund09743 Selenicereus undatus HOM05D049530 ORTHO05D381085 6.7e-06 54.7 79 46.8
Medtr3g093260 Medicago truncatula HOM05D017340 ORTHO05D019814 8.8e-06 54.3 88 42.0


User provided reference genes

Program Settings