Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015489 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.1e-87 326.6 168 100.0
Hma1.2p1_1875F.1_g306260 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 9.7e-52 207.2 169 68.6
Cfa015866 Carpinus fangiana HOM05D007903 ORTHO05D009925 8.8e-45 184.1 161 64.6
TAR374G1449 Trochodendron aralioides HOM05D007903 ORTHO05D009925 1.4e-42 176.8 171 57.3
Haze_00633 Corylus avellana HOM05D007903 ORTHO05D009925 3.1e-42 175.6 161 64.0
Potri.008G122700 Populus trichocarpa HOM05D007903 ORTHO05D009925 1.9e-39 166.4 162 58.6
Hma1.2p1_2787F.1_g328510 Hydrangea macrophylla HOM05D007903 ORTHO05D009925 3.2e-39 165.6 137 66.4
CiPaw.05G239700 Carya illinoinensis HOM05D007903 ORTHO05D009925 1.8e-37 159.8 169 56.8
CSS0009081 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 7.5e-36 154.5 153 62.7
Nn4g23903 Nelumbo nucifera HOM05D007903 ORTHO05D009925 9.7e-36 154.1 178 52.8
Potri.010G122600 Populus trichocarpa HOM05D007903 ORTHO05D009925 3.7e-35 152.1 162 54.9
Sabra08G0093200 Salix brachista HOM05D007903 ORTHO05D009925 1.1e-34 150.6 148 58.1
Aqoxy3G00252 Aquilegia oxysepala HOM05D007903 ORTHO05D009925 3.1e-34 149.1 170 53.5
QL01p040711 Quercus lobata HOM05D007903 ORTHO05D009925 5.3e-34 148.3 140 59.3
Manes.14G104700 Manihot esculenta HOM05D007903 ORTHO05D009925 4.5e-33 145.2 162 53.1
PGSC0003DMG400006002 Solanum tuberosum HOM05D007903 ORTHO05D009925 3.8e-32 142.1 170 52.4
CSS0036148 Camellia sinensis var. sinensis HOM05D007903 ORTHO05D009925 1.1e-31 140.6 153 60.1
Thecc.02G225400 Theobroma cacao HOM05D007903 ORTHO05D009925 1.1e-31 140.6 171 53.8
DCAR_030171 Daucus carota HOM05D007903 ORTHO05D009925 2.1e-30 136.3 170 47.6
CAN.G25.18 Capsicum annuum HOM05D007903 ORTHO05D009925 1.4e-29 133.7 174 52.3
Lj5g0001705 Lotus japonicus HOM05D007903 ORTHO05D009925 1.8e-29 133.3 168 50.6
Oeu057730.1 Olea europaea HOM05D007903 ORTHO05D009925 4.0e-29 132.1 166 51.2
Sabra10G0092700 Salix brachista HOM05D007903 ORTHO05D009925 3.4e-28 129.0 165 50.3
MD16G1040300 Malus domestica HOM05D007903 ORTHO05D009925 2.2e-27 126.3 161 50.9
MD13G1039400 Malus domestica HOM05D007903 ORTHO05D009925 2.8e-27 125.9 162 50.0
Peaxi162Scf00564g00039 Petunia axillaris HOM05D007903 ORTHO05D009925 2.8e-27 125.9 128 56.2
Duzib268G0450 Durio zibethinus HOM05D007903 ORTHO05D009925 4.8e-27 125.2 160 53.8
Solyc04g007360.1 Solanum lycopersicum HOM05D007903 ORTHO05D009925 6.3e-27 124.8 166 46.4
Gohir.D09G043400 Gossypium hirsutum HOM05D007903 ORTHO05D009925 1.2e-25 120.6 148 50.0
Gorai.006G050300 Gossypium raimondii HOM05D007903 ORTHO05D009925 1.2e-25 120.6 148 50.0
Gohir.A09G042700 Gossypium hirsutum HOM05D007903 ORTHO05D009925 3.5e-25 119.0 148 52.7
Prupe.1G313800 Prunus persica HOM05D007903 ORTHO05D009925 5.9e-25 118.2 164 48.8
Ciclev10017603m.g Citrus clementina HOM05D007903 ORTHO05D009925 1.0e-24 117.5 167 48.5
Lalb_Chr06g0165971 Lupinus albus HOM05D007903 ORTHO05D009925 1.0e-24 117.5 160 48.8
PGR119G1971 Punica granatum HOM05D007903 ORTHO05D009925 2.9e-24 115.9 164 45.7
RcHm_v2.0_Chr4g0434841 Rosa chinensis HOM05D007903 ORTHO05D009925 3.8e-24 115.5 167 44.9
Migut.E00359 Erythranthe guttata HOM05D007903 ORTHO05D009925 3.2e-23 112.5 160 46.9
Dinv31619 Davidia involucrata HOM05D007903 ORTHO05D009925 5.5e-23 111.7 171 49.1
FAN12G2568 Fragaria x ananassa HOM05D007903 ORTHO05D009925 9.4e-23 110.9 160 46.2
FvH4_4g27040 Fragaria vesca HOM05D007903 ORTHO05D009925 3.6e-22 109.0 170 43.5
FAN07G0160 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.6e-22 109.0 167 43.7
FAN12G1984 Fragaria x ananassa HOM05D007903 ORTHO05D009925 3.6e-22 109.0 170 43.5
Sopen04g002420 Solanum pennellii HOM05D007903 ORTHO05D009925 6.8e-21 104.8 132 49.2
CsaV3_5G034450 Cucumis sativus L. HOM05D007903 ORTHO05D009925 8.8e-21 104.4 149 40.9
Thhalv10019802m.g Eutrema salsugineum HOM05D007903 ORTHO05D009925 8.8e-21 104.4 168 41.7
FAN22G0942 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.2e-20 104.0 171 45.0
Sp5g23400 Schrenkiella parvula HOM05D007903 ORTHO05D009925 3.4e-20 102.4 162 42.0
CARHR061060 Cardamine hirsuta HOM05D007903 ORTHO05D009925 4.4e-20 102.1 161 44.7
TWI31G0067 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 4.4e-20 102.1 167 43.7
AL2G27200 Arabidopsis lyrata HOM05D007903 ORTHO05D009925 5.7e-20 101.7 161 45.3
Sed0015064 Sechium edule HOM05D007903 ORTHO05D009925 9.8e-20 100.9 158 41.8
VMungo0720G0077 Vigna mungo HOM05D007903 ORTHO05D009925 9.8e-20 100.9 164 42.7
Sc04g0006190 Simmondsia chinensis HOM05D007903 ORTHO05D009925 1.7e-19 100.1 162 44.4
THA.LOC104821918 Tarenaya hassleriana HOM05D007903 ORTHO05D009925 1.7e-19 100.1 166 42.8
BcaB03g15412 Brassica carinata HOM05D007903 ORTHO05D009925 2.2e-19 99.8 164 40.9
AT1G68350 Arabidopsis thaliana HOM05D007903 ORTHO05D009925 3.7e-19 99.0 162 42.0
Carub.0002s1485 Capsella rubella HOM05D007903 ORTHO05D009925 4.9e-19 98.6 161 42.9
BcaC08g45975 Brassica carinata HOM05D007903 ORTHO05D009925 1.1e-18 97.4 164 40.2
C06p37650 Brassica napus HOM05D007903 ORTHO05D009925 1.1e-18 97.4 164 40.2
BolC6t38868H Brassica oleracea HOM05D007903 ORTHO05D009925 1.1e-18 97.4 164 40.2
FAN17G2767 Fragaria x ananassa HOM05D007903 ORTHO05D009925 1.8e-18 96.7 170 41.8
BcaB05g24366 Brassica carinata HOM05D007903 ORTHO05D009925 7.0e-18 94.7 164 42.7
Glyma.20G117500 Glycine max HOM05D007903 ORTHO05D009925 3.5e-17 92.4 161 45.3
BraA02t06557Z Brassica rapa HOM05D007903 ORTHO05D009925 5.9e-17 91.7 166 39.8
CANSAT01G0431 Cannabis sativa HOM05D007903 ORTHO05D009925 5.9e-17 91.7 180 41.1
Phvul.007G029300 Phaseolus vulgaris HOM05D007903 ORTHO05D009925 1.5e-15 87.0 159 39.0
Cpa.g.sc65.47 Carica papaya HOM05D007903 ORTHO05D009925 1.6e-14 83.6 171 40.9
Lsat_1_v5_gn_3_57941 Lactuca sativa HOM05D007903 ORTHO05D009925 2.1e-14 83.2 99 53.5
ClCG05G022570 Citrullus lanatus HOM05D007903 ORTHO05D009925 2.8e-14 82.8 138 37.7
Actinidia38376 Actinidia chinensis HOM05D007903 ORTHO05D009925 1.8e-13 80.1 65 63.1
COL.COLO4_08991 Corchorus olitorius HOM05D007903 ORTHO05D009925 2.3e-13 79.7 147 42.9
EL10Ac6g14355 Beta vulgaris HOM05D007903 ORTHO05D009925 2.0e-12 76.6 157 38.2
Os01g0133200 Oryza sativa ssp. japonica HOM05D007903 ORTHO05D009925 2.7e-09 66.2 202 34.7
SalBow8G0258 Salvia bowleyana HOM05D065226 ORTHO05D009925 2.7e-09 66.2 164 39.0
SalBow8G1517 Salvia bowleyana HOM05D065226 ORTHO05D009925 2.7e-09 66.2 164 39.0
TWI79G1550 Tripterygium wilfordii HOM05D007903 ORTHO05D009925 2.3e-08 63.2 147 38.1
Eucgr.G02306 Eucalyptus grandis HOM05D007903 ORTHO05D009925 3.0e-08 62.8 170 35.9
Nitab4.5_0000057g0130 Nicotiana tabacum HOM05D007903 ORTHO05D009925 1.9e-07 60.1 56 58.9
HPP92_004796 Vanilla planifolia HOM05D007903 ORTHO05D009925 1.9e-07 60.1 168 34.5
vmacro10574 Vaccinium macrocarpon HOM05D007903 ORTHO05D009925 7.3e-07 58.2 60 56.7


User provided reference genes

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