Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 1.4e-231 805.8 387 100.0
CSS0002818 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 2.5e-159 565.8 402 70.9
CSS0016779 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 3.4e-140 502.3 417 61.2
CSS0022832 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 3.0e-133 479.2 417 62.1
CSS0045488 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 4.1e-122 442.2 253 84.2
CSS0022059 Camellia sinensis var. sinensis HOM05D013052 ORTHO05D000378 6.9e-53 212.2 509 31.6
Rhsim01G0094200 Rhododendron simsii HOM05D013052 ORTHO05D012831 2.0e-36 157.5 412 34.2
QL01p000349 Quercus lobata HOM05D013052 ORTHO05D012831 1.6e-33 147.9 371 30.5
QL10p008459 Quercus lobata HOM05D013052 ORTHO05D012831 2.7e-33 147.1 371 30.7
CSS0019932 Camellia sinensis var. sinensis HOM05D018855 ORTHO05D012831 1.2e-31 141.7 100 66.0
Rhsim07G0240100 Rhododendron simsii HOM05D013052 ORTHO05D012831 5.7e-31 139.4 426 31.0
RhsimUnG0085000 Rhododendron simsii HOM05D013052 ORTHO05D012831 5.3e-29 132.9 272 35.7
Rhsim01G0094100 Rhododendron simsii HOM05D013052 ORTHO05D012831 7.0e-29 132.5 272 35.7
Rhsim07G0240000 Rhododendron simsii HOM05D013052 ORTHO05D012831 1.2e-28 131.7 258 36.0
QL10p008435 Quercus lobata HOM05D013052 ORTHO05D012831 2.7e-25 120.6 417 29.7
QL11p055992 Quercus lobata HOM05D013052 ORTHO05D012831 5.7e-23 112.8 276 31.5
Rhsim11G0021200 Rhododendron simsii HOM05D013052 ORTHO05D000007 9.8e-23 112.1 127 44.9
QL11p054840 Quercus lobata HOM05D000002 ORTHO05D000001 3.4e-15 87.0 191 31.4
Rhsim07G0174600 Rhododendron simsii HOM05D018855 ORTHO05D012831 1.8e-13 81.3 106 49.1
QL11p036388 Quercus lobata HOM05D010066 ORTHO05D009743 3.2e-13 80.5 190 30.5
QL11p036410 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-12 78.6 190 30.5
QL01p003691 Quercus lobata HOM05D010066 ORTHO05D009743 5.9e-12 76.3 199 29.6
Haze_02253 Corylus avellana HOM05D001291 ORTHO05D009743 1.5e-10 71.6 186 26.9
Haze_02263 Corylus avellana HOM05D008391 ORTHO05D009743 1.5e-10 71.6 186 26.9
QL11p050365 Quercus lobata HOM05D010066 ORTHO05D009743 2.5e-10 70.9 191 31.9
QL02p072942 Quercus lobata HOM05D025100 ORTHO05D010877 3.3e-10 70.5 192 29.2
QL11p033269 Quercus lobata HOM05D010066 ORTHO05D009743 9.5e-10 68.9 198 29.8
QL11p038460 Quercus lobata HOM05D010066 ORTHO05D009743 1.2e-09 68.6 195 27.7
QL11p056498 Quercus lobata HOM05D010066 ORTHO05D009743 1.6e-09 68.2 246 28.0
Dinv35631 Davidia involucrata HOM05D013363 ORTHO05D015094 2.8e-09 67.4 190 29.5
Haze_02251 Corylus avellana HOM05D000722 ORTHO05D000590 2.3e-08 64.3 162 29.6
QL05p053761 Quercus lobata HOM05D010066 ORTHO05D016816 2.3e-08 64.3 198 27.3
QL11p051711 Quercus lobata HOM05D010066 ORTHO05D009743 4.0e-08 63.5 280 27.1
Haze_19280 Corylus avellana HOM05D008391 ORTHO05D009743 5.2e-08 63.2 164 33.5
Cfa003918 Carpinus fangiana HOM05D008391 ORTHO05D009743 6.8e-08 62.8 287 27.2
QL11p019943 Quercus lobata HOM05D010066 ORTHO05D009743 6.8e-08 62.8 218 26.6
QL11p050103 Quercus lobata HOM05D010066 ORTHO05D009743 2.6e-07 60.8 202 27.2
QL02p073240 Quercus lobata HOM05D025100 ORTHO05D010877 4.4e-07 60.1 189 27.5
QL11p042465 Quercus lobata HOM05D025344 ORTHO05D009743 7.5e-07 59.3 209 28.7
QL09p047090 Quercus lobata HOM05D041046 ORTHO05D021181 1.7e-06 58.2 202 28.2
QL11p042411 Quercus lobata HOM05D025344 ORTHO05D009743 2.2e-06 57.8 202 30.2
QL11p038513 Quercus lobata HOM05D010066 ORTHO05D009743 4.9e-06 56.6 164 27.4
Haze_02259 Corylus avellana HOM05D000722 ORTHO05D000590 6.4e-06 56.2 159 27.7


User provided reference genes

Program Settings