Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015483 Camellia sinensis var. sinensis HOM05D006728 ORTHO05D007911 0.0e+00 1525.4 776 100.0
Actinidia23017 Actinidia chinensis HOM05D006728 ORTHO05D007911 4.3e-272 941.4 717 69.7
Dinv41739 Davidia involucrata HOM05D006728 ORTHO05D007911 1.4e-241 840.1 736 62.0
vmacro12473 Vaccinium macrocarpon HOM05D006728 ORTHO05D007911 6.8e-233 811.2 775 60.0
Rhsim10G0109300 Rhododendron simsii HOM05D006728 ORTHO05D007911 1.0e-217 760.8 651 65.0
Hma1.2p1_0705F.1_g206940 Hydrangea macrophylla HOM05D006728 ORTHO05D007911 1.2e-197 694.1 744 54.7
CiPaw.03G020000 Carya illinoinensis HOM05D006728 ORTHO05D007911 2.5e-179 633.3 736 50.5
TAR381G1619 Trochodendron aralioides HOM05D006728 ORTHO05D007911 5.3e-177 625.5 731 50.5
GSVIVG01012775001 Vitis vinifera HOM05D006728 ORTHO05D007911 9.3e-174 614.8 680 51.2
QL09p005234 Quercus lobata HOM05D006728 ORTHO05D007911 2.7e-165 586.6 737 48.2
Potri.004G133900 Populus trichocarpa HOM05D006728 ORTHO05D007911 8.2e-162 575.1 728 47.4
Sabra04G0084300 Salix brachista HOM05D006728 ORTHO05D007911 4.2e-158 562.8 728 47.0
Oeu051790.1 Olea europaea HOM05D006728 ORTHO05D007911 1.5e-155 554.3 747 45.2
Haze_13898 Corylus avellana HOM05D006728 ORTHO05D007911 1.3e-154 551.2 726 47.5
Gohir.D05G252600 Gossypium hirsutum HOM05D006728 ORTHO05D007911 1.0e-151 541.6 741 45.1
MD15G1410500 Malus domestica HOM05D006728 ORTHO05D007911 1.3e-151 541.2 735 46.4
Atru.chr13.2383 Acer truncatum HOM05D006728 ORTHO05D007911 2.2e-151 540.4 716 46.6
Gorai.009G264600 Gossypium raimondii HOM05D006728 ORTHO05D007911 3.8e-151 539.7 743 44.3
MELO3C022215.2 Cucumis melo HOM05D006728 ORTHO05D007911 3.2e-150 536.6 722 45.2
COL.COLO4_24796 Corchorus olitorius HOM05D006728 ORTHO05D007911 1.0e-148 531.6 737 42.7
Manes.01G125500 Manihot esculenta HOM05D006728 ORTHO05D007911 2.3e-148 530.4 737 44.6
Gohir.A05G251200 Gossypium hirsutum HOM05D006728 ORTHO05D007911 6.7e-148 528.9 726 45.0
Sed0021340 Sechium edule HOM05D006728 ORTHO05D007911 3.3e-147 526.6 728 45.1
CsaV3_5G040430 Cucumis sativus L. HOM05D006728 ORTHO05D007911 7.4e-147 525.4 722 44.7
MSTRG.1553 Avicennia marina HOM05D006728 ORTHO05D007911 9.7e-147 525.0 715 45.3
ClCG08G000330 Citrullus lanatus HOM05D006728 ORTHO05D007911 2.4e-145 520.4 710 44.4
CAN.G102.5 Capsicum annuum HOM05D006728 ORTHO05D007911 6.9e-145 518.8 716 45.9
Cc10_g10290 Coffea canephora HOM05D006728 ORTHO05D007911 5.9e-144 515.8 729 45.8
RcHm_v2.0_Chr7g0228481 Rosa chinensis HOM05D006728 ORTHO05D007911 3.2e-142 510.0 730 44.9
Sopen11g011050 Solanum pennellii HOM05D006728 ORTHO05D007911 4.7e-141 506.1 714 45.5
PGSC0003DMG400009266 Solanum tuberosum HOM05D006728 ORTHO05D007911 6.1e-141 505.8 714 45.7
Peaxi162Scf00391g00619 Petunia axillaris HOM05D006728 ORTHO05D007911 1.0e-140 505.0 711 46.6
Ciclev10004396m.g Citrus clementina HOM05D006728 ORTHO05D007911 1.4e-140 504.6 750 42.7
Migut.C01293 Erythranthe guttata HOM05D006728 ORTHO05D007911 2.8e-138 496.9 719 43.7
FAN08G1230 Fragaria x ananassa HOM05D006728 ORTHO05D007911 4.1e-137 493.0 733 44.3
Nn1g02058 Nelumbo nucifera HOM05D006728 ORTHO05D007911 9.1e-137 491.9 752 42.4
FvH4_5g32290 Fragaria vesca HOM05D006728 ORTHO05D007911 7.7e-136 488.8 742 43.7
FAN04G0014 Fragaria x ananassa HOM05D006728 ORTHO05D007911 2.9e-135 486.9 733 44.1
FAN18G3195 Fragaria x ananassa HOM05D006728 ORTHO05D007911 1.9e-134 484.2 742 43.5
Nitab4.5_0000365g0060 Nicotiana tabacum HOM05D006728 ORTHO05D007911 3.6e-133 479.9 723 44.8
FAN13G2633 Fragaria x ananassa HOM05D006728 ORTHO05D007911 8.0e-133 478.8 733 43.8
SGA_v2.0_scaffold144G35834 Striga asiatica HOM05D005033 ORTHO05D007005 2.0e-131 474.2 732 41.4
SalBow7G3045 Salvia bowleyana HOM05D006728 ORTHO05D007911 8.2e-130 468.8 716 41.3
Prupe.1G552000 Prunus persica HOM05D006728 ORTHO05D007911 7.0e-129 465.7 516 52.9
TWI23G0528 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.5e-126 458.0 747 40.3
TWI59G0071 Tripterygium wilfordii HOM05D006728 ORTHO05D007911 1.5e-126 458.0 706 40.1
Migut.J01202 Erythranthe guttata HOM05D006728 ORTHO05D007911 5.7e-123 446.0 605 46.0
THA.LOC104799928 Tarenaya hassleriana HOM05D006728 ORTHO05D007911 3.5e-120 436.8 720 40.4
DCAR_011523 Daucus carota HOM05D006728 ORTHO05D007911 1.2e-117 428.3 754 39.9
Eucgr.J01411 Eucalyptus grandis HOM05D006728 ORTHO05D007911 1.0e-116 425.2 624 41.5
Nitab4.5_0004437g0010 Nicotiana tabacum HOM05D006728 ORTHO05D007911 2.0e-115 421.0 638 44.5
Glyma.02G174700 Glycine max HOM05D006728 ORTHO05D007911 1.1e-113 415.2 671 40.8
ECA232G4554 Erigeron canadensis HOM05D006728 ORTHO05D007911 9.2e-113 412.1 668 40.7
PGR044G1487 Punica granatum HOM05D006728 ORTHO05D007911 5.9e-112 409.5 688 40.4
HanXRQChr17g0559021 Helianthus annuus HOM05D006728 ORTHO05D007911 3.3e-110 403.7 716 38.4
Lsat_1_v5_gn_4_133160 Lactuca sativa HOM05D006728 ORTHO05D007911 5.6e-110 402.9 715 38.2
Lalb_Chr21g0312581 Lupinus albus HOM05D006728 ORTHO05D007911 1.4e-108 398.3 653 40.0
unitig_749.g13882 Utricularia gibba HOM05D006728 ORTHO05D007911 6.0e-104 382.9 713 36.7
Thecc.03G072600 Theobroma cacao HOM05D006728 ORTHO05D007911 3.3e-102 377.1 452 49.3
Psat6g140120 Pisum sativum HOM05D006728 ORTHO05D007911 2.1e-101 374.4 665 39.1
VMungo0720G2132 Vigna mungo HOM05D006728 ORTHO05D007911 2.3e-100 370.9 656 39.6
Medtr1g072850 Medicago truncatula HOM05D006728 ORTHO05D007911 1.2e-99 368.6 671 37.7
Phvul.L001685 Phaseolus vulgaris HOM05D006728 ORTHO05D007911 2.2e-98 364.4 664 38.3
Ca_09788_v3 Cicer arietinum L. HOM05D006728 ORTHO05D007911 3.7e-98 363.6 665 37.9
Aa31LG5G9990 Aethionema arabicum HOM05D006728 ORTHO05D007911 4.9e-98 363.2 766 35.1
Cpa.g.c30412.3 Carica papaya HOM05D006728 ORTHO05D007911 1.2e-96 358.6 450 48.2
CARHR235190 Cardamine hirsuta HOM05D006728 ORTHO05D007911 6.0e-96 356.3 733 35.5
Sp7g25450 Schrenkiella parvula HOM05D006728 ORTHO05D007911 1.9e-94 351.3 738 35.6
PSO144G0035 Papaver somniferum HOM05D006728 ORTHO05D007911 2.8e-93 347.4 705 36.3
C01p23690 Brassica napus HOM05D006728 ORTHO05D007911 1.1e-92 345.5 729 34.6
BolC1t02321H Brassica oleracea HOM05D006728 ORTHO05D007911 1.1e-92 345.5 729 34.6
Lj5g0018420 Lotus japonicus HOM05D006728 ORTHO05D007911 2.3e-92 344.4 657 38.4
AT4G27510 Arabidopsis thaliana HOM05D006728 ORTHO05D007911 4.0e-92 343.6 723 36.4
Glyma.10G191500 Glycine max HOM05D006728 ORTHO05D007911 5.2e-92 343.2 601 39.6
Solyc11g020910.3 Solanum lycopersicum HOM05D006728 ORTHO05D007911 1.2e-91 342.0 478 45.6
A01p18730 Brassica napus HOM05D006728 ORTHO05D007911 7.1e-89 332.8 728 33.8
Aqoxy7G02767 Aquilegia oxysepala HOM05D006728 ORTHO05D007911 2.1e-88 331.3 721 36.1
Thhalv10024534m.g Eutrema salsugineum HOM05D006728 ORTHO05D007911 2.7e-88 330.9 745 34.9
BraA01t01819Z Brassica rapa HOM05D006728 ORTHO05D007911 1.3e-87 328.6 736 33.6
Carub.0007s1334 Capsella rubella HOM05D006728 ORTHO05D007911 1.7e-87 328.2 718 35.5
PSO325G0011 Papaver somniferum HOM05D006728 ORTHO05D007911 1.1e-86 325.5 699 35.8
ATR0487G015 Amborella trichopoda HOM05D006728 ORTHO05D007911 1.5e-86 325.1 716 33.0
TPR.G18562 Trifolium pratense HOM05D006728 ORTHO05D007911 4.7e-85 320.1 674 35.2
SHI29298 Sapria himalayana HOM05D006728 ORTHO05D007911 1.7e-82 311.6 586 36.0
PSO325G0006 Papaver somniferum HOM05D006728 ORTHO05D007911 4.0e-76 290.4 625 37.0
arahy.Tifrunner.gnm1.ann1.2Y318K Arachis hypogaea HOM05D006728 ORTHO05D007911 1.1e-73 282.3 674 33.4
Sc24g0002590 Simmondsia chinensis HOM05D006728 ORTHO05D007911 3.2e-73 280.8 741 32.5
AUR62037055 Chenopodium quinoa HOM05D006728 ORTHO05D007911 4.2e-73 280.4 713 32.8
BcaNung07241 Brassica carinata HOM05D006728 ORTHO05D007911 9.3e-73 279.3 722 32.3
EL10Ac7g16629 Beta vulgaris HOM05D006728 ORTHO05D007911 3.3e-70 270.8 707 32.5
PSO170G3307 Papaver somniferum HOM05D006728 ORTHO05D007911 4.8e-69 266.9 708 33.1
arahy.Tifrunner.gnm1.ann1.HTR7VF Arachis hypogaea HOM05D006728 ORTHO05D007911 9.9e-67 259.2 501 35.7
arahy.Tifrunner.gnm1.ann1.SM6YYV Arachis hypogaea HOM05D006728 ORTHO05D007911 9.9e-67 259.2 501 36.1
arahy.Tifrunner.gnm1.ann1.PFS1J6 Arachis hypogaea HOM05D006728 ORTHO05D007911 1.3e-66 258.8 500 35.8
Atru.chr1.2802 Acer truncatum HOM05D006728 ORTHO05D007911 2.2e-66 258.1 364 43.1
Hund02381 Selenicereus undatus HOM05D006728 ORTHO05D007911 8.4e-66 256.1 726 32.8
Nn3g16574 Nelumbo nucifera HOM05D006728 ORTHO05D007911 2.1e-64 251.5 733 29.6
AUR62036525 Chenopodium quinoa HOM05D006728 ORTHO05D007911 6.0e-64 250.0 589 34.0
PSO170G3890 Papaver somniferum HOM05D006728 ORTHO05D007911 4.6e-48 197.2 417 36.2
Cpa.g.c34985.1 Carica papaya HOM05D006728 ORTHO05D007911 1.6e-32 145.6 234 37.6
HPP92_000129 Vanilla planifolia HOM05D006728 ORTHO05D007911 1.0e-31 142.9 672 24.7
SEGI_13662 Sequoiadendron giganteum HOM05D013057 ORTHO05D007911 7.4e-30 136.7 719 25.5
Atru.chr1.2803 Acer truncatum HOM05D006728 ORTHO05D007911 4.1e-28 131.0 150 52.0
arahy.Tifrunner.gnm1.ann1.G54CSB Arachis hypogaea HOM05D006728 ORTHO05D007911 2.6e-27 128.3 281 34.9
TPR.G18439 Trifolium pratense HOM05D006728 ORTHO05D007911 4.4e-22 110.9 193 35.8
Zm00001eb295040 Zea mays HOM05D006728 ORTHO05D007911 1.8e-20 105.5 532 24.6
Os02g0461200 Oryza sativa ssp. japonica HOM05D006728 ORTHO05D007911 2.6e-19 101.7 540 24.8
Glyma.20G198732 Glycine max HOM05D006728 ORTHO05D007911 8.8e-15 86.7 124 43.5
Cfa008144 Carpinus fangiana HOM05D006728 ORTHO05D007911 8.3e-13 80.1 74 52.7
CDE05G2798 Ceratophyllum demersum HOM05D006728 ORTHO05D007911 1.8e-12 79.0 101 43.6
Glyma.20G198666 Glycine max HOM05D006728 ORTHO05D007911 2.0e-11 75.5 136 37.5
Prupe.8G015600 Prunus persica HOM05D025481 ORTHO05D007911 1.9e-09 68.9 240 30.0
SHI29297 Sapria himalayana HOM05D006728 ORTHO05D007911 1.8e-07 62.4 56 53.6
BcaB04g17382 Brassica carinata HOM05D006728 ORTHO05D007911 2.6e-06 58.5 116 34.5


User provided reference genes

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