Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015441 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 6.1e-208 727.2 370 100.0
Rhsim03G0005600 Rhododendron simsii HOM05D005841 ORTHO05D007132 1.9e-180 636.0 363 88.4
Actinidia22040 Actinidia chinensis HOM05D005841 ORTHO05D007132 3.5e-179 631.7 348 93.1
vmacro07900 Vaccinium macrocarpon HOM05D005841 ORTHO05D007132 2.1e-176 622.5 363 85.4
Dinv24065 Davidia involucrata HOM05D005841 ORTHO05D007132 1.4e-175 619.8 364 86.0
Dinv14310 Davidia involucrata HOM05D005841 ORTHO05D007132 1.7e-173 612.8 363 86.0
Atru.chr12.1096 Acer truncatum HOM05D005841 ORTHO05D007132 5.6e-161 571.2 364 80.2
Lju124A25T34 Lonicera japonica HOM05D005841 ORTHO05D007132 2.0e-158 562.8 359 82.5
QL04p022932 Quercus lobata HOM05D005841 ORTHO05D007132 3.4e-158 562.0 404 71.5
CiPaw.14G011500 Carya illinoinensis HOM05D005841 ORTHO05D007132 1.1e-156 557.0 416 70.4
Potri.003G189400 Populus trichocarpa HOM05D005841 ORTHO05D007132 1.4e-156 556.6 371 77.6
Sabra01G0025200 Salix brachista HOM05D005841 ORTHO05D007132 2.3e-154 549.3 361 78.4
Ciclev10001427m.g Citrus clementina HOM05D005841 ORTHO05D007132 3.9e-154 548.5 392 72.7
Peaxi162Scf00258g00731 Petunia axillaris HOM05D005841 ORTHO05D007132 9.6e-153 543.9 408 69.4
Potri.001G036400 Populus trichocarpa HOM05D005841 ORTHO05D007132 2.8e-152 542.3 361 77.3
Thecc.10G128400 Theobroma cacao HOM05D005841 ORTHO05D007132 3.1e-151 538.9 363 73.8
Manes.04G153300 Manihot esculenta HOM05D005841 ORTHO05D007132 6.9e-151 537.7 381 72.7
Glyma.04G125600 Glycine max HOM05D005841 ORTHO05D007132 2.6e-150 535.8 359 75.5
MSTRG.19910 Avicennia marina HOM05D005841 ORTHO05D007132 3.4e-150 535.4 356 73.9
Cc06_g15810 Coffea canephora HOM05D005841 ORTHO05D007132 5.8e-150 534.6 368 73.6
Oeu007758.1 Olea europaea HOM05D005841 ORTHO05D007132 1.3e-149 533.5 357 74.5
Gohir.A06G171000 Gossypium hirsutum HOM05D005841 ORTHO05D007132 1.7e-149 533.1 363 73.8
Gohir.D06G178900 Gossypium hirsutum HOM05D005841 ORTHO05D007132 2.9e-149 532.3 363 73.6
Lj3g0005753 Lotus japonicus HOM05D005841 ORTHO05D007132 2.9e-149 532.3 358 76.0
Nitab4.5_0004458g0010 Nicotiana tabacum HOM05D005841 ORTHO05D007132 2.9e-149 532.3 410 68.0
Phvul.005G012800 Phaseolus vulgaris HOM05D005841 ORTHO05D007132 2.9e-149 532.3 359 74.9
PSO384G2928 Papaver somniferum HOM05D005841 ORTHO05D007132 3.8e-149 531.9 362 72.9
Duzib128G0994 Durio zibethinus HOM05D005841 ORTHO05D007132 4.9e-149 531.6 364 74.2
COL.COLO4_09288 Corchorus olitorius HOM05D005841 ORTHO05D007132 6.5e-149 531.2 363 74.4
Haze_02951 Corylus avellana HOM05D005841 ORTHO05D007132 1.1e-148 530.4 459 62.5
VMungo1080G1721 Vigna mungo HOM05D005841 ORTHO05D007132 1.1e-148 530.4 359 74.9
Gorai.010G208800 Gossypium raimondii HOM05D005841 ORTHO05D007132 1.9e-148 529.6 363 73.3
Nitab4.5_0000324g0020 Nicotiana tabacum HOM05D005841 ORTHO05D007132 1.9e-148 529.6 410 68.3
Sc20g0000960 Simmondsia chinensis HOM05D005841 ORTHO05D007132 3.2e-148 528.9 362 74.0
Sabra03G0139600 Salix brachista HOM05D005841 ORTHO05D007132 5.5e-148 528.1 349 77.4
Lalb_Chr18g0048171 Lupinus albus HOM05D005841 ORTHO05D007132 2.7e-147 525.8 363 73.6
PSO339G0077 Papaver somniferum HOM05D005841 ORTHO05D007132 3.5e-147 525.4 362 72.1
Glyma.06G313000 Glycine max HOM05D005841 ORTHO05D007132 6.0e-147 524.6 359 74.4
DCAR_019783 Daucus carota HOM05D005841 ORTHO05D007132 7.9e-147 524.2 360 74.7
Medtr3g011510 Medicago truncatula HOM05D005841 ORTHO05D007132 7.9e-147 524.2 360 74.2
TWI38G1535 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 1.5e-145 520.0 357 74.2
THA.LOC104809184 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 1.6e-144 516.5 361 70.4
THA.LOC104824200 Tarenaya hassleriana HOM05D005841 ORTHO05D007132 2.4e-143 512.7 363 71.9
GSVIVG01027370001 Vitis vinifera HOM05D005841 ORTHO05D007132 4.0e-143 511.9 367 73.3
Lsat_1_v5_gn_5_163601 Lactuca sativa HOM05D005841 ORTHO05D007132 6.9e-143 511.1 407 66.8
ECA248G0891 Erigeron canadensis HOM05D005841 ORTHO05D007132 2.6e-142 509.2 415 65.1
TWI15G0221 Tripterygium wilfordii HOM05D005841 ORTHO05D007132 5.8e-142 508.1 364 71.7
MSTRG.26082 Avicennia marina HOM05D005841 ORTHO05D007132 1.3e-141 506.9 371 70.1
Ca_26913_v3 Cicer arietinum L. HOM05D005841 ORTHO05D007132 3.8e-141 505.4 345 73.3
TPR.G5121 Trifolium pratense HOM05D005841 ORTHO05D007132 6.5e-141 504.6 396 67.4
unitig_699.g19444 Utricularia gibba HOM05D005841 ORTHO05D007132 2.5e-140 502.7 357 69.5
arahy.Tifrunner.gnm1.ann1.AX9XXP Arachis hypogaea HOM05D005841 ORTHO05D007132 1.2e-139 500.4 370 69.5
Hund07799 Selenicereus undatus HOM05D005841 ORTHO05D007132 1.2e-139 500.4 358 71.8
Aa31sc488G20 Aethionema arabicum HOM05D005841 ORTHO05D007132 2.7e-139 499.2 354 70.9
Eucgr.G03178 Eucalyptus grandis HOM05D005841 ORTHO05D007132 1.8e-138 496.5 406 65.0
HanXRQChr13g0390471 Helianthus annuus HOM05D005841 ORTHO05D007132 8.7e-138 494.2 325 75.4
EL10Ac9g20941 Beta vulgaris HOM05D005841 ORTHO05D007132 7.4e-137 491.1 342 71.3
PGSC0003DMG400023670 Solanum tuberosum HOM05D005841 ORTHO05D007132 1.3e-136 490.3 423 62.6
CANSAT56G0667 Cannabis sativa HOM05D005841 ORTHO05D007132 3.1e-135 485.7 384 65.4
MELO3C011778.2 Cucumis melo HOM05D005841 ORTHO05D007132 6.9e-135 484.6 398 63.1
CsaV3_5G029280 Cucumis sativus L. HOM05D005841 ORTHO05D007132 2.0e-134 483.0 399 62.7
Sopen10g031070 Solanum pennellii HOM05D005841 ORTHO05D007132 2.0e-134 483.0 448 59.8
MBI19_g24060_MAGBIO Magnolia biondii HOM05D005841 ORTHO05D007132 1.3e-133 480.3 410 63.4
AUR62041651 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.2e-133 479.6 342 70.5
Ah.07g203740 Amaranthus hybridus HOM05D005841 ORTHO05D007132 3.8e-133 478.8 351 70.7
BcaB02g07739 Brassica carinata HOM05D005841 ORTHO05D007132 8.5e-133 477.6 345 69.3
Sed0011967 Sechium edule HOM05D005841 ORTHO05D007132 1.9e-132 476.5 411 61.3
Thhalv10010421m.g Eutrema salsugineum HOM05D005841 ORTHO05D007132 3.2e-132 475.7 405 62.2
Sp5g08040 Schrenkiella parvula HOM05D005841 ORTHO05D007132 3.2e-132 475.7 412 61.9
AT3G54360 Arabidopsis thaliana HOM05D005841 ORTHO05D007132 5.5e-132 474.9 394 62.9
Sed0002293 Sechium edule HOM05D005841 ORTHO05D007132 9.4e-132 474.2 381 64.6
Solyc10g080520.3 Solanum lycopersicum HOM05D005841 ORTHO05D007132 2.7e-131 472.6 395 64.3
AL5G35420 Arabidopsis lyrata HOM05D005841 ORTHO05D007132 3.6e-131 472.2 406 61.3
Aqoxy3G04362 Aquilegia oxysepala HOM05D005841 ORTHO05D007132 2.3e-130 469.5 358 65.6
C08p29570 Brassica napus HOM05D005841 ORTHO05D007132 5.1e-130 468.4 407 61.4
Carub.0005s2096 Capsella rubella HOM05D005841 ORTHO05D007132 5.1e-130 468.4 406 60.3
arahy.Tifrunner.gnm1.ann1.87YK44 Arachis hypogaea HOM05D005841 ORTHO05D007132 1.1e-129 467.2 374 65.8
CARHR164270 Cardamine hirsuta HOM05D005841 ORTHO05D007132 1.1e-129 467.2 396 62.1
BolC8t50563H Brassica oleracea HOM05D005841 ORTHO05D007132 2.5e-129 466.1 408 61.3
A07p22080 Brassica napus HOM05D005841 ORTHO05D007132 1.7e-128 463.4 396 62.4
A09p47340 Brassica napus HOM05D005841 ORTHO05D007132 1.7e-128 463.4 399 61.4
BraA07t29891Z Brassica rapa HOM05D005841 ORTHO05D007132 1.7e-128 463.4 396 62.4
AUR62035532 Chenopodium quinoa HOM05D005841 ORTHO05D007132 2.2e-128 463.0 342 69.0
BcaB01g00199 Brassica carinata HOM05D005841 ORTHO05D007132 2.8e-128 462.6 380 64.7
BraA09t40195Z Brassica rapa HOM05D005841 ORTHO05D007132 1.4e-127 460.3 400 61.5
SGA_v2.0_scaffold69G23059 Striga asiatica HOM05D005841 ORTHO05D007132 5.9e-126 454.9 354 66.4
Psat5g225080 Pisum sativum HOM05D005841 ORTHO05D007132 6.5e-125 451.4 310 74.2
CDE02G3427 Ceratophyllum demersum HOM05D005841 ORTHO05D007132 2.5e-124 449.5 358 64.0
Nn2g15922 Nelumbo nucifera HOM05D005841 ORTHO05D007132 2.5e-124 449.5 354 66.4
MD07G1085200 Malus domestica HOM05D005841 ORTHO05D007132 4.2e-124 448.7 366 64.8
Zm00001eb126920 Zea mays HOM05D005841 ORTHO05D007132 1.2e-123 447.2 337 67.1
Migut.J01841 Erythranthe guttata HOM05D005841 ORTHO05D007132 4.7e-123 445.3 357 64.1
Prupe.2G051700 Prunus persica HOM05D005841 ORTHO05D007132 7.9e-123 444.5 367 65.4
RcHm_v2.0_Chr1g0330051 Rosa chinensis HOM05D005841 ORTHO05D007132 1.7e-120 436.8 362 65.2
Os01g0104100 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 8.2e-120 434.5 363 61.2
ClCG11G012870 Citrullus lanatus HOM05D005841 ORTHO05D007132 1.4e-119 433.7 397 58.7
FvH4_7g04620 Fragaria vesca HOM05D005841 ORTHO05D007132 1.2e-118 430.6 357 65.0
SEGI_15550 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.2e-118 430.6 365 60.8
CSS0023245 Camellia sinensis var. sinensis HOM05D005841 ORTHO05D007132 1.3e-117 427.2 213 100.0
BcaC08g44679 Brassica carinata HOM05D005841 ORTHO05D007132 8.8e-114 414.5 366 60.9
FAN06G4202 Fragaria x ananassa HOM05D005841 ORTHO05D007132 6.3e-112 408.3 342 64.3
FAN03G2595 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.1e-111 407.5 342 64.0
FAN10G3225 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.8e-111 406.8 363 61.7
FAN06G1077 Fragaria x ananassa HOM05D005841 ORTHO05D007132 3.1e-111 406.0 342 63.7
FAN01G0675 Fragaria x ananassa HOM05D005841 ORTHO05D007132 1.6e-110 403.7 342 63.7
C06p22120 Brassica napus HOM05D005841 ORTHO05D007132 1.3e-109 400.6 293 69.3
BolC6t37399H Brassica oleracea HOM05D005841 ORTHO05D007132 1.3e-109 400.6 293 69.3
Os02g0795300 Oryza sativa ssp. japonica HOM05D005841 ORTHO05D007132 3.8e-101 372.5 367 55.3
Pp3c4_17260 Physcomitrium patens HOM05D005841 ORTHO05D007132 1.1e-100 370.9 314 58.0
Gorai.011G224300 Gossypium raimondii HOM05D005841 ORTHO05D007132 6.3e-96 355.1 270 66.7
Mapoly0042s0033 Marchantia polymorpha HOM05D005841 ORTHO05D007132 1.6e-94 350.5 364 51.6
AagrBONN_evm.TU.Sc2ySwM_344.2135 Anthoceros agrestis HOM05D005841 ORTHO05D007132 5.0e-93 345.5 408 46.8
AUR62039567 Chenopodium quinoa HOM05D005841 ORTHO05D007132 1.7e-85 320.5 367 52.6
SMO194G0025 Selaginella moellendorffii HOM05D005841 ORTHO05D007132 2.3e-82 310.1 316 50.9
Ah.15g098060 Amaranthus hybridus HOM05D005841 ORTHO05D007132 2.9e-80 303.1 214 72.0
AUR62041645 Chenopodium quinoa HOM05D005841 ORTHO05D007132 8.6e-77 291.6 217 70.0
ATR0068G039 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.9e-71 273.9 217 63.1
Cpa.g.sc33.143 Carica papaya HOM05D005841 ORTHO05D007132 6.0e-62 242.3 157 76.4
Hma1.2p1_3953F.1_g338070 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 5.6e-60 235.7 149 80.5
HPP92_001714 Vanilla planifolia HOM05D005841 ORTHO05D007132 4.0e-58 229.6 255 50.6
CBR_g19049 Chara braunii HOM05D005841 ORTHO05D007132 4.9e-56 222.6 390 36.9
Gohir.D10G200101 Gossypium hirsutum HOM05D005841 ORTHO05D007132 3.5e-54 216.5 150 70.7
FAN03G2434 Fragaria x ananassa HOM05D005841 ORTHO05D007132 5.8e-49 199.1 128 77.3
TAR629G2175 Trochodendron aralioides HOM05D005841 ORTHO05D007132 2.7e-46 190.3 149 67.1
SEGI_12352 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 2.4e-42 177.2 136 63.2
Gohir.D10G200050 Gossypium hirsutum HOM05D005841 ORTHO05D007132 7.6e-41 172.2 115 72.2
Hma1.2p1_3953F.1_g338060 Hydrangea macrophylla HOM05D005841 ORTHO05D007132 5.8e-33 146.0 79 87.3
SEGI_26376 Sequoiadendron giganteum HOM05D005841 ORTHO05D007132 1.3e-21 108.2 147 45.6
Lsat_1_v5_gn_1_17940 Lactuca sativa HOM05D005841 ORTHO05D007132 8.7e-21 105.5 73 65.8
ATR0068G030 Amborella trichopoda HOM05D005841 ORTHO05D007132 1.1e-15 88.6 66 69.7
Cre03.g172600 Chlamydomonas reinhardtii HOM05D005841 ORTHO05D007132 3.3e-12 77.0 431 21.3
Psat0s5799g0040 Pisum sativum HOM05D005841 ORTHO05D007132 1.1e-10 72.0 72 52.8
Psat7g004640 Pisum sativum HOM05D000860 ORTHO05D005731 2.4e-10 70.9 52 69.2
TPR.G5122 Trifolium pratense HOM05D003377 ORTHO05D004080 3.4e-09 67.0 59 61.0
CiPaw.13G018400 Carya illinoinensis HOM05D005841 ORTHO05D007132 6.1e-06 56.2 41 73.2


User provided reference genes

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