Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 0.0e+00 1332.4 714 100.0
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 0.0e+00 1197.2 728 89.7
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.5e-162 577.4 762 51.4
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.3e-161 574.3 748 51.7
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 2.1e-151 540.4 757 49.3
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 2.4e-144 516.9 740 50.3
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 1.2e-140 504.6 742 49.3
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 1.2e-130 471.5 822 43.3
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 7.6e-130 468.8 799 43.9
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 1.6e-100 371.3 722 40.4
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 3.4e-98 363.6 751 37.8
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 2.8e-92 344.0 813 36.4
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 3.1e-91 340.5 761 37.5
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 6.9e-91 339.3 759 37.0
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 6.9e-91 339.3 680 42.2
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.2e-84 317.8 779 36.5
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 1.6e-82 311.6 531 44.3
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 1.0e-81 308.9 752 36.7
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 3.8e-81 307.0 628 39.8
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 6.5e-81 306.2 792 35.2
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 6.5e-81 306.2 763 35.4
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 6.5e-81 306.2 770 34.5
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 6.5e-81 306.2 635 38.6
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.5e-80 304.3 658 38.4
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 9.4e-80 302.4 638 38.9
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 2.7e-79 300.8 752 35.4
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 1.4e-78 298.5 755 36.0
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 1.8e-78 298.1 761 35.9
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 2.6e-77 294.3 631 39.3
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 2.6e-77 294.3 623 40.1
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 1.4e-75 288.5 757 35.3
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 2.4e-75 287.7 757 34.9
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 7.7e-74 282.7 752 33.9
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 5.0e-73 280.0 639 38.5
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 7.2e-72 276.2 742 34.0
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 7.2e-72 276.2 861 33.4
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 9.8e-69 265.8 847 32.8
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 8.3e-68 262.7 610 37.5
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 4.1e-67 260.4 754 34.6
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 4.1e-67 260.4 752 34.4
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 7.0e-67 259.6 632 36.2
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 9.1e-67 259.2 734 34.6
Dinv20819 Davidia involucrata HOM05D005926 ORTHO05D007001 1.2e-66 258.8 407 45.0
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 1.6e-66 258.5 761 33.5
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 5.9e-66 256.5 747 35.1
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 1.9e-64 251.5 791 34.4
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 3.2e-64 250.8 838 32.0
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.2e-63 248.8 766 33.7
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.6e-63 248.4 731 33.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 3.6e-63 247.3 754 32.8
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 6.1e-63 246.5 740 32.8
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.4e-62 245.4 736 33.4
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 2.3e-62 244.6 733 33.2
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 4.0e-62 243.8 680 37.1
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 4.4e-61 240.4 725 33.0
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 2.2e-60 238.0 726 32.2
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.8e-60 237.7 745 33.8
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 1.4e-59 235.3 621 34.6
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 1.8e-59 235.0 639 34.4
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 2.4e-59 234.6 642 33.5
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 4.1e-59 233.8 745 33.6
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 4.5e-58 230.3 646 34.5
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 1.7e-57 228.4 595 34.8
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 4.3e-56 223.8 628 33.4
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 7.3e-56 223.0 746 32.2
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 6.1e-55 219.9 720 33.5
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 1.0e-54 219.2 746 32.8
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 1.2e-53 215.7 658 34.3
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 1.2e-53 215.7 744 33.7
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 1.5e-53 215.3 636 33.2
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 3.2e-51 207.6 635 33.1
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 4.1e-51 207.2 635 32.8
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 1.2e-50 205.7 302 49.7
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 3.3e-48 197.6 666 34.1
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 4.3e-48 197.2 599 33.7
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 3.1e-46 191.0 600 31.2
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 6.8e-46 189.9 689 31.2
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 4.4e-45 187.2 728 29.9
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 2.9e-44 184.5 608 32.9
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 4.9e-44 183.7 639 30.8
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 4.9e-44 183.7 704 29.8
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 8.3e-44 183.0 636 31.9
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 1.6e-42 178.7 630 33.2
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 2.8e-39 167.9 738 27.9
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 6.8e-38 163.3 739 29.0
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 2.9e-36 157.9 539 31.2
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 4.9e-36 157.1 682 28.0
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 6.4e-36 156.8 656 28.4
Haze_02594 Corylus avellana HOM05D005926 ORTHO05D007001 1.1e-35 156.0 423 33.1
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 5.4e-35 153.7 741 28.2
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 1.2e-34 152.5 298 42.3
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 5.1e-33 147.1 568 30.5
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 8.6e-33 146.4 555 30.1
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 1.1e-32 146.0 662 28.7
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 1.2e-31 142.5 655 27.9
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 3.6e-31 141.0 678 26.7
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 2.3e-30 138.3 677 26.0
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 1.5e-29 135.6 568 30.1
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 3.2e-27 127.9 679 26.2
Oeu026567.1 Olea europaea HOM05D005926 ORTHO05D007001 4.1e-27 127.5 418 31.1
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 3.9e-25 120.9 311 37.3
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 6.6e-25 120.2 628 26.0
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 7.3e-24 116.7 632 27.2
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 7.3e-24 116.7 626 25.2
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 1.6e-23 115.5 617 26.3
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 1.6e-23 115.5 617 25.0
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 3.6e-23 114.4 719 25.3
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 3.6e-23 114.4 719 25.3
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 1.1e-22 112.8 629 25.8
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 1.1e-22 112.8 634 26.8
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.8e-22 112.1 629 25.8
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 9.9e-21 106.3 623 27.4
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 4.9e-20 104.0 712 25.0
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 2.4e-19 101.7 707 24.9
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 9.3e-19 99.8 673 26.6
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 3.5e-18 97.8 648 25.9
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 4.6e-18 97.4 343 31.5
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.4e-14 85.9 662 25.8
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 5.8e-13 80.5 315 29.8
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 1.3e-12 79.3 291 30.9
arahy.Tifrunner.gnm1.ann1.L8M84U Arachis hypogaea HOM05D005926 ORTHO05D007001 1.9e-11 75.5 246 33.7
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 2.4e-11 75.1 256 31.6
arahy.Tifrunner.gnm1.ann1.UA3HQT Arachis hypogaea HOM05D005926 ORTHO05D007001 9.3e-11 73.2 299 30.4
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 1.5e-08 65.9 362 27.1
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.3e-07 62.8 84 47.6
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 3.1e-06 58.2 194 33.0
Actinidia31091 Actinidia chinensis HOM05D005926 ORTHO05D007001 6.9e-06 57.0 148 31.1


User provided reference genes

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